RNA–Protein interactions for RNA: ENST00000638790.1

MED17-216, Transcript of mediator complex subunit 17, humanhuman

TSL 5

Gene MED17, Length 1,885 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED17-216ENST00000638790 ARHGAP35Q9NRY4 1499 aa36.73■■■■□ 3.47
MED17-216ENST00000638790 ARAP1Q96P48 1450 aa36.68■■■■□ 3.46
MED17-216ENST00000638790 VPS8Q8N3P4 1428 aa36.64■■■■□ 3.46
MED17-216ENST00000638790 CHMP7Q8WUX9 453 aaPredicted RBP36.63■■■■□ 3.45
MED17-216ENST00000638790 EFCAB5A4FU69 1503 aa36.56■■■■□ 3.44
MED17-216ENST00000638790 KIAA0586Q9BVV6 1533 aa36.54■■■■□ 3.44
MED17-216ENST00000638790 IQGAP2Q13576 1575 aa36.54■■■■□ 3.44
MED17-216ENST00000638790 NUP160Q12769 1436 aa36.52■■■■□ 3.44
MED17-216ENST00000638790 CEP170Q5SW79 1584 aa36.5■■■■□ 3.43
MED17-216ENST00000638790 FBLN2P98095 1184 aa36.5■■■■□ 3.43
MED17-216ENST00000638790 SAMD9Q5K651 1589 aa36.47■■■■□ 3.43
MED17-216ENST00000638790 UGGT2Q9NYU1 1516 aa36.41■■■■□ 3.42
MED17-216ENST00000638790 FHOD3Q2V2M9 1422 aa36.37■■■■□ 3.41
MED17-216ENST00000638790 P3H3Q8IVL6 736 aa36.36■■■■□ 3.41
MED17-216ENST00000638790 CHD1O14646 1710 aa36.36■■■■□ 3.41
MED17-216ENST00000638790 DISP1Q96F81 1524 aa36.24■■■■□ 3.39
MED17-216ENST00000638790 FMN1Q68DA7 1419 aa36.22■■■■□ 3.39
MED17-216ENST00000638790 PPARGC1BQ86YN6 1023 aaKnown RBP36.22■■■■□ 3.39
MED17-216ENST00000638790 JPH4Q96JJ6 628 aa36.19■■■■□ 3.38
MED17-216ENST00000638790 KIAA0556O60303 1618 aa36.18■■■■□ 3.38
MED17-216ENST00000638790 CASKIN1Q8WXD9 1431 aa36.15■■■■□ 3.38
MED17-216ENST00000638790 PCF11O94913 1555 aaKnown RBP36.14■■■■□ 3.38
MED17-216ENST00000638790 APLP2Q06481 763 aa36.14■■■■□ 3.38
MED17-216ENST00000638790 TRIM26Q12899 539 aaPredicted RBP36.12■■■■□ 3.37
MED17-216ENST00000638790 FYCO1Q9BQS8 1478 aa36.11■■■■□ 3.37
MED17-216ENST00000638790 MAP3K1Q13233 1512 aa36.09■■■■□ 3.37
MED17-216ENST00000638790 CARMIL2Q6F5E8 1435 aa36.04■■■■□ 3.36
MED17-216ENST00000638790 CLASP1Q7Z460 1538 aa36.03■■■■□ 3.36
MED17-216ENST00000638790 SHROOM2Q13796 1616 aa36.02■■■■□ 3.36
MED17-216ENST00000638790 PCGF6Q9BYE7 350 aa35.99■■■■□ 3.35
MED17-216ENST00000638790 TIAM1Q13009 1591 aa35.99■■■■□ 3.35
MED17-216ENST00000638790 KANK4Q5T7N3 995 aaPredicted RBP35.97■■■■□ 3.35
MED17-216ENST00000638790 PRG4Q92954 1404 aaPredicted RBP35.96■■■■□ 3.35
MED17-216ENST00000638790 TTBK1Q5TCY1 1321 aaPredicted RBP35.92■■■■□ 3.34
MED17-216ENST00000638790 CFAP43Q8NDM7 1665 aa35.91■■■■□ 3.34
MED17-216ENST00000638790 ATP1B4Q9UN42 357 aaPredicted RBP35.88■■■■□ 3.33
MED17-216ENST00000638790 LRRIQ1Q96JM4 1722 aa35.85■■■■□ 3.33
MED17-216ENST00000638790 LRRC9Q6ZRR7 1453 aa35.84■■■■□ 3.33
MED17-216ENST00000638790 HECW1Q76N89 1606 aa35.84■■■■□ 3.33
MED17-216ENST00000638790 RAPGEF6Q8TEU7 1601 aa35.78■■■■□ 3.32
MED17-216ENST00000638790 CCDC18Q5T9S5 1454 aa35.77■■■■□ 3.32
MED17-216ENST00000638790 ERCC6L2Q5T890 1561 aa35.76■■■■□ 3.31
MED17-216ENST00000638790 EPRSP07814 1512 aaKnown RBP35.75■■■■□ 3.31
MED17-216ENST00000638790 OSCARQ8IYS5 282 aa35.75■■■■□ 3.31
MED17-216ENST00000638790 PLB1Q6P1J6 1458 aa35.74■■■■□ 3.31
MED17-216ENST00000638790 NUP153P49790 1475 aaKnown RBP35.74■■■■□ 3.31
MED17-216ENST00000638790 PTPRGP23470 1445 aa35.72■■■■□ 3.31
MED17-216ENST00000638790 ABCA8O94911 1581 aa35.7■■■■□ 3.31
MED17-216ENST00000638790 CDK13Q14004 1512 aaKnown RBP35.64■■■■□ 3.3
MED17-216ENST00000638790 MAGI3Q5TCQ9 1506 aa35.6■■■■□ 3.29
MED17-216ENST00000638790 MTUS2Q5JR59 1369 aa35.59■■■■□ 3.29
MED17-216ENST00000638790 EHBP1L1Q8N3D4 1523 aa35.56■■■■□ 3.28
MED17-216ENST00000638790 RRBP1Q9P2E9 1410 aaKnown RBP35.53■■■■□ 3.28
MED17-216ENST00000638790 UACAQ9BZF9 1416 aa35.53■■■■□ 3.28
MED17-216ENST00000638790 PHLDB1Q86UU1 1377 aa35.51■■■■□ 3.28
MED17-216ENST00000638790 ARID3CA6NKF2 412 aa35.51■■■■□ 3.28
MED17-216ENST00000638790 ATP10BO94823 1461 aa35.47■■■■□ 3.27
MED17-216ENST00000638790 ARHGEF11O15085 1522 aa35.45■■■■□ 3.27
MED17-216ENST00000638790 NCOA2Q15596 1464 aa35.43■■■■□ 3.26
MED17-216ENST00000638790 SUPT6HQ7KZ85 1726 aaKnown RBP35.42■■■■□ 3.26
MED17-216ENST00000638790 ABCC2Q92887 1545 aa35.42■■■■□ 3.26
MED17-216ENST00000638790 CDK11AQ9UQ88 783 aaPredicted RBP35.41■■■■□ 3.26
MED17-216ENST00000638790 CCNB3Q8WWL7 1395 aa35.39■■■■□ 3.26
MED17-216ENST00000638790 UHRF1BP1LA0JNW5 1464 aa35.39■■■■□ 3.26
MED17-216ENST00000638790 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.37■■■■□ 3.25
MED17-216ENST00000638790 HNRNPUL2Q1KMD3 747 aaKnown RBP35.37■■■■□ 3.25
MED17-216ENST00000638790 TROQ12816 1431 aaPredicted RBP35.35■■■■□ 3.25
MED17-216ENST00000638790 MYOM3Q5VTT5 1437 aa35.28■■■■□ 3.24
MED17-216ENST00000638790 FGD6Q6ZV73 1430 aa35.26■■■■□ 3.24
MED17-216ENST00000638790 PLEKHD1A6NEE1 506 aa35.25■■■■□ 3.23
MED17-216ENST00000638790 KDM5BQ9UGL1 1544 aa35.24■■■■□ 3.23
MED17-216ENST00000638790 ADCY10Q96PN6 1610 aa35.24■■■■□ 3.23
MED17-216ENST00000638790 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.23■■■■□ 3.23
MED17-216ENST00000638790 KIF14Q15058 1648 aa35.16■■■■□ 3.22
MED17-216ENST00000638790 ZCCHC11Q5TAX3 1644 aaKnown RBP35.14■■■■□ 3.22
MED17-216ENST00000638790 MIA2Q96PC5 1412 aa35.14■■■■□ 3.22
MED17-216ENST00000638790 ABCC10Q5T3U5 1492 aa35.09■■■■□ 3.21
MED17-216ENST00000638790 FAM50AQ14320 339 aaKnown RBP35.09■■■■□ 3.21
MED17-216ENST00000638790 TCOF1Q13428 1488 aaKnown RBP35.09■■■■□ 3.21
MED17-216ENST00000638790 PTPN23Q9H3S7 1636 aa35.06■■■■□ 3.2
MED17-216ENST00000638790 GPATCH8Q9UKJ3 1502 aaKnown RBP35.04■■■■□ 3.2
MED17-216ENST00000638790 RIMBP3CA6NJZ7 1639 aa34.98■■■■□ 3.19
MED17-216ENST00000638790 RIMBP3BA6NNM3 1639 aa34.98■■■■□ 3.19
MED17-216ENST00000638790 RIMBP3Q9UFD9 1639 aa34.98■■■■□ 3.19
MED17-216ENST00000638790 ITSN2Q9NZM3 1697 aa34.97■■■■□ 3.19
MED17-216ENST00000638790 ITGAEP38570 1179 aa34.95■■■■□ 3.19
MED17-216ENST00000638790 CDC42BPAQ5VT25 1732 aa34.93■■■■□ 3.18
MED17-216ENST00000638790 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.91■■■■□ 3.18
MED17-216ENST00000638790 CFDP1Q9UEE9 299 aaPredicted RBP34.9■■■■□ 3.18
MED17-216ENST00000638790 PTPRKQ15262 1439 aa34.89■■■■□ 3.18
MED17-216ENST00000638790 WDR7Q9Y4E6 1490 aa34.88■■■■□ 3.17
MED17-216ENST00000638790 TTC37Q6PGP7 1564 aa34.86■■■■□ 3.17
MED17-216ENST00000638790 ZNF644Q9H582 1327 aaPredicted RBP34.85■■■■□ 3.17
MED17-216ENST00000638790 ASXL2Q76L83 1435 aa34.83■■■■□ 3.17
MED17-216ENST00000638790 KCNH8Q96L42 1107 aa34.82■■■■□ 3.17
MED17-216ENST00000638790 CAMSAP2Q08AD1 1489 aa34.81■■■■□ 3.16
MED17-216ENST00000638790 NPM1P06748 294 aaKnown RBP eCLIP34.81■■■■□ 3.16
MED17-216ENST00000638790 HRCP23327 699 aa34.81■■■■□ 3.16
MED17-216ENST00000638790 PREX2Q70Z35 1606 aa34.81■■■■□ 3.16
MED17-216ENST00000638790 CYB5RLQ6IPT4 315 aa34.8■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms