RNA–Protein interactions for RNA: ENST00000638629.1

PAX6-235, Transcript of paired box 6, humanhuman

TSL 2 BASIC

Gene PAX6, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-235ENST00000638629 ARAP1Q96P48 1450 aa16.15■□□□□ 0.18
PAX6-235ENST00000638629 ARHGAP35Q9NRY4 1499 aa16.15■□□□□ 0.18
PAX6-235ENST00000638629 ADAMTS12P58397 1594 aa16.14■□□□□ 0.17
PAX6-235ENST00000638629 CTTNBP2Q8WZ74 1663 aa16.12■□□□□ 0.17
PAX6-235ENST00000638629 SNAPC4Q5SXM2 1469 aa16.11■□□□□ 0.17
PAX6-235ENST00000638629 MAGI1Q96QZ7 1491 aaPredicted RBP16.06■□□□□ 0.16
PAX6-235ENST00000638629 APLP2Q06481 763 aa16.05■□□□□ 0.16
PAX6-235ENST00000638629 P3H3Q8IVL6 736 aa16.04■□□□□ 0.16
PAX6-235ENST00000638629 TTBK1Q5TCY1 1321 aaPredicted RBP16.03■□□□□ 0.16
PAX6-235ENST00000638629 EFCAB5A4FU69 1503 aa16.03■□□□□ 0.16
PAX6-235ENST00000638629 GRIN2AQ12879 1464 aa16.02■□□□□ 0.15
PAX6-235ENST00000638629 CHMP7Q8WUX9 453 aaPredicted RBP16.02■□□□□ 0.15
PAX6-235ENST00000638629 SYNJ2O15056 1496 aa16.01■□□□□ 0.15
PAX6-235ENST00000638629 FHOD3Q2V2M9 1422 aa15.99■□□□□ 0.15
PAX6-235ENST00000638629 FBLN2P98095 1184 aa15.99■□□□□ 0.15
PAX6-235ENST00000638629 IQGAP2Q13576 1575 aa15.97■□□□□ 0.15
PAX6-235ENST00000638629 SAMD9Q5K651 1589 aa15.96■□□□□ 0.15
PAX6-235ENST00000638629 KIAA0586Q9BVV6 1533 aa15.96■□□□□ 0.15
PAX6-235ENST00000638629 CEP170Q5SW79 1584 aa15.91■□□□□ 0.14
PAX6-235ENST00000638629 FMN1Q68DA7 1419 aa15.91■□□□□ 0.14
PAX6-235ENST00000638629 UGGT2Q9NYU1 1516 aa15.9■□□□□ 0.14
PAX6-235ENST00000638629 KANK4Q5T7N3 995 aaPredicted RBP15.9■□□□□ 0.14
PAX6-235ENST00000638629 NUP160Q12769 1436 aa15.9■□□□□ 0.14
PAX6-235ENST00000638629 PCF11O94913 1555 aaKnown RBP15.89■□□□□ 0.13
PAX6-235ENST00000638629 CASKIN1Q8WXD9 1431 aa15.88■□□□□ 0.13
PAX6-235ENST00000638629 ATP1B4Q9UN42 357 aaPredicted RBP15.88■□□□□ 0.13
PAX6-235ENST00000638629 MAP3K1Q13233 1512 aa15.87■□□□□ 0.13
PAX6-235ENST00000638629 FYCO1Q9BQS8 1478 aa15.86■□□□□ 0.13
PAX6-235ENST00000638629 TIAM1Q13009 1591 aa15.85■□□□□ 0.13
PAX6-235ENST00000638629 DISP1Q96F81 1524 aa15.83■□□□□ 0.13
PAX6-235ENST00000638629 PELP1Q8IZL8 1130 aaKnown RBP15.83■□□□□ 0.13
PAX6-235ENST00000638629 JPH4Q96JJ6 628 aa15.83■□□□□ 0.12
PAX6-235ENST00000638629 CHD1O14646 1710 aa15.82■□□□□ 0.12
PAX6-235ENST00000638629 KIAA0556O60303 1618 aa15.81■□□□□ 0.12
PAX6-235ENST00000638629 CCER1Q8TC90 406 aaPredicted RBP15.81■□□□□ 0.12
PAX6-235ENST00000638629 CFAP43Q8NDM7 1665 aa15.79■□□□□ 0.12
PAX6-235ENST00000638629 LRRC9Q6ZRR7 1453 aa15.79■□□□□ 0.12
PAX6-235ENST00000638629 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.78■□□□□ 0.12
PAX6-235ENST00000638629 CARMIL2Q6F5E8 1435 aa15.76■□□□□ 0.11
PAX6-235ENST00000638629 SCAF1Q9H7N4 1312 aaKnown RBP15.75■□□□□ 0.11
PAX6-235ENST00000638629 LRRIQ1Q96JM4 1722 aa15.73■□□□□ 0.11
PAX6-235ENST00000638629 HECW1Q76N89 1606 aa15.72■□□□□ 0.11
PAX6-235ENST00000638629 PRG4Q92954 1404 aaPredicted RBP15.7■□□□□ 0.1
PAX6-235ENST00000638629 CCDC18Q5T9S5 1454 aa15.7■□□□□ 0.1
PAX6-235ENST00000638629 RRBP1Q9P2E9 1410 aaKnown RBP15.69■□□□□ 0.1
PAX6-235ENST00000638629 EPRSP07814 1512 aaKnown RBP15.68■□□□□ 0.1
PAX6-235ENST00000638629 MTUS2Q5JR59 1369 aa15.68■□□□□ 0.1
PAX6-235ENST00000638629 HNRNPUL2Q1KMD3 747 aaKnown RBP15.68■□□□□ 0.1
PAX6-235ENST00000638629 RAPGEF6Q8TEU7 1601 aa15.67■□□□□ 0.1
PAX6-235ENST00000638629 PHLDB1Q86UU1 1377 aa15.66■□□□□ 0.1
PAX6-235ENST00000638629 SHROOM2Q13796 1616 aa15.66■□□□□ 0.1
PAX6-235ENST00000638629 ARID3CA6NKF2 412 aa15.65■□□□□ 0.1
PAX6-235ENST00000638629 CCNB3Q8WWL7 1395 aa15.65■□□□□ 0.1
PAX6-235ENST00000638629 CDK13Q14004 1512 aaKnown RBP15.64■□□□□ 0.09
PAX6-235ENST00000638629 NUP153P49790 1475 aaKnown RBP15.64■□□□□ 0.09
PAX6-235ENST00000638629 PLB1Q6P1J6 1458 aa15.64■□□□□ 0.09
PAX6-235ENST00000638629 CLASP1Q7Z460 1538 aa15.63■□□□□ 0.09
PAX6-235ENST00000638629 ACIN1Q9UKV3 1341 aaKnown RBP15.63■□□□□ 0.09
PAX6-235ENST00000638629 EHBP1L1Q8N3D4 1523 aa15.62■□□□□ 0.09
PAX6-235ENST00000638629 DIEXFQ68CQ4 756 aaKnown RBP15.62■□□□□ 0.09
PAX6-235ENST00000638629 MAGI3Q5TCQ9 1506 aa15.62■□□□□ 0.09
PAX6-235ENST00000638629 PTPRGP23470 1445 aa15.62■□□□□ 0.09
PAX6-235ENST00000638629 ABCA8O94911 1581 aa15.59■□□□□ 0.09
PAX6-235ENST00000638629 NCOA2Q15596 1464 aa15.59■□□□□ 0.09
PAX6-235ENST00000638629 SUPT6HQ7KZ85 1726 aaKnown RBP15.59■□□□□ 0.09
PAX6-235ENST00000638629 ERCC6L2Q5T890 1561 aa15.57■□□□□ 0.08
PAX6-235ENST00000638629 CDK11AQ9UQ88 783 aaPredicted RBP15.57■□□□□ 0.08
PAX6-235ENST00000638629 CENPBP07199 599 aaPredicted RBP15.55■□□□□ 0.08
PAX6-235ENST00000638629 FAM50AQ14320 339 aaKnown RBP15.55■□□□□ 0.08
PAX6-235ENST00000638629 ARHGEF11O15085 1522 aa15.54■□□□□ 0.08
PAX6-235ENST00000638629 ITGAEP38570 1179 aa15.54■□□□□ 0.08
PAX6-235ENST00000638629 FGD6Q6ZV73 1430 aa15.53■□□□□ 0.08
PAX6-235ENST00000638629 OSCARQ8IYS5 282 aa15.53■□□□□ 0.08
PAX6-235ENST00000638629 MYOM3Q5VTT5 1437 aa15.53■□□□□ 0.08
PAX6-235ENST00000638629 ZNF316A6NFI3 1004 aaPredicted RBP15.52■□□□□ 0.08
PAX6-235ENST00000638629 ATP10BO94823 1461 aa15.52■□□□□ 0.07
PAX6-235ENST00000638629 UACAQ9BZF9 1416 aa15.51■□□□□ 0.07
PAX6-235ENST00000638629 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.51■□□□□ 0.07
PAX6-235ENST00000638629 NEUROD1Q13562 356 aa15.51■□□□□ 0.07
PAX6-235ENST00000638629 TROQ12816 1431 aaPredicted RBP15.5■□□□□ 0.07
PAX6-235ENST00000638629 PLEKHD1A6NEE1 506 aa15.48■□□□□ 0.07
PAX6-235ENST00000638629 ABCC2Q92887 1545 aa15.44■□□□□ 0.06
PAX6-235ENST00000638629 PTPN23Q9H3S7 1636 aa15.44■□□□□ 0.06
PAX6-235ENST00000638629 MIA2Q96PC5 1412 aa15.44■□□□□ 0.06
PAX6-235ENST00000638629 ADCY10Q96PN6 1610 aa15.42■□□□□ 0.06
PAX6-235ENST00000638629 CLSPNQ9HAW4 1339 aa15.42■□□□□ 0.06
PAX6-235ENST00000638629 TCOF1Q13428 1488 aaKnown RBP15.42■□□□□ 0.06
PAX6-235ENST00000638629 KIF14Q15058 1648 aa15.41■□□□□ 0.06
PAX6-235ENST00000638629 UHRF1BP1LA0JNW5 1464 aa15.41■□□□□ 0.06
PAX6-235ENST00000638629 SETD5Q9C0A6 1442 aa15.38■□□□□ 0.05
PAX6-235ENST00000638629 PTPRKQ15262 1439 aa15.38■□□□□ 0.05
PAX6-235ENST00000638629 GPATCH8Q9UKJ3 1502 aaKnown RBP15.37■□□□□ 0.05
PAX6-235ENST00000638629 RAB3GAP2Q9H2M9 1393 aa15.36■□□□□ 0.05
PAX6-235ENST00000638629 GTF3C3Q9Y5Q9 886 aa15.36■□□□□ 0.05
PAX6-235ENST00000638629 ABCC10Q5T3U5 1492 aa15.36■□□□□ 0.05
PAX6-235ENST00000638629 CFDP1Q9UEE9 299 aaPredicted RBP15.36■□□□□ 0.05
PAX6-235ENST00000638629 KDM5BQ9UGL1 1544 aa15.35■□□□□ 0.05
PAX6-235ENST00000638629 ZNF644Q9H582 1327 aaPredicted RBP15.34■□□□□ 0.05
PAX6-235ENST00000638629 ITSN2Q9NZM3 1697 aa15.34■□□□□ 0.05
PAX6-235ENST00000638629 ZCCHC11Q5TAX3 1644 aaKnown RBP15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms