RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 CCNB3Q8WWL7 1395 aa22.57■■□□□ 1.2
SCARB2-210ENST00000638567 KANK4Q5T7N3 995 aaPredicted RBP22.53■■□□□ 1.2
SCARB2-210ENST00000638567 KDM2AQ9Y2K7 1162 aa22.52■■□□□ 1.2
SCARB2-210ENST00000638567 WIZO95785 1651 aa22.48■■□□□ 1.19
SCARB2-210ENST00000638567 NBR1Q14596 966 aa22.47■■□□□ 1.19
SCARB2-210ENST00000638567 SENP3-EIF4A1A0A087X0R7 540 aa22.43■■□□□ 1.18
SCARB2-210ENST00000638567 TSPY4P0CV99 314 aa22.43■■□□□ 1.18
SCARB2-210ENST00000638567 TSPY10P0CW01 314 aa22.43■■□□□ 1.18
SCARB2-210ENST00000638567 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.43■■□□□ 1.18
SCARB2-210ENST00000638567 ANP32EQ9BTT0 268 aa22.42■■□□□ 1.18
SCARB2-210ENST00000638567 ZBTB47Q9UFB7 747 aaPredicted RBP22.4■■□□□ 1.18
SCARB2-210ENST00000638567 BCL11AQ9H165 835 aa22.39■■□□□ 1.18
SCARB2-210ENST00000638567 CARMIL1Q5VZK9 1371 aa22.35■■□□□ 1.17
SCARB2-210ENST00000638567 CUX2O14529 1486 aa22.32■■□□□ 1.16
SCARB2-210ENST00000638567 RUSC2Q8N2Y8 1516 aa22.31■■□□□ 1.16
SCARB2-210ENST00000638567 TOP2AP11388 1531 aaKnown RBP22.31■■□□□ 1.16
SCARB2-210ENST00000638567 FHAD1B1AJZ9 1412 aa22.3■■□□□ 1.16
SCARB2-210ENST00000638567 TIMELESSQ9UNS1 1208 aa22.3■■□□□ 1.16
SCARB2-210ENST00000638567 SETD5Q9C0A6 1442 aa22.3■■□□□ 1.16
SCARB2-210ENST00000638567 CHGAP10645 457 aaKnown RBP22.29■■□□□ 1.16
SCARB2-210ENST00000638567 CHMP7Q8WUX9 453 aaPredicted RBP22.28■■□□□ 1.16
SCARB2-210ENST00000638567 RAB3GAP2Q9H2M9 1393 aa22.27■■□□□ 1.16
SCARB2-210ENST00000638567 WDR43Q15061 677 aaKnown RBP eCLIP22.24■■□□□ 1.15
SCARB2-210ENST00000638567 NEFMP07197 916 aa22.24■■□□□ 1.15
SCARB2-210ENST00000638567 CFDP1Q9UEE9 299 aaPredicted RBP22.23■■□□□ 1.15
SCARB2-210ENST00000638567 CCER2I3L3R5 266 aa22.22■■□□□ 1.15
SCARB2-210ENST00000638567 RAPGEF2Q9Y4G8 1499 aa22.22■■□□□ 1.15
SCARB2-210ENST00000638567 RGL3Q3MIN7 710 aa22.22■■□□□ 1.15
SCARB2-210ENST00000638567 PPP4R2Q9NY27 417 aa22.21■■□□□ 1.15
SCARB2-210ENST00000638567 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.19■■□□□ 1.14
SCARB2-210ENST00000638567 B4GALNT3Q6L9W6 998 aa22.17■■□□□ 1.14
SCARB2-210ENST00000638567 PLEKHD1A6NEE1 506 aa22.17■■□□□ 1.14
SCARB2-210ENST00000638567 CARD11Q9BXL7 1154 aa22.17■■□□□ 1.14
SCARB2-210ENST00000638567 DHX57Q6P158 1386 aaKnown RBP22.14■■□□□ 1.13
SCARB2-210ENST00000638567 UPF2Q9HAU5 1272 aaKnown RBP22.13■■□□□ 1.13
SCARB2-210ENST00000638567 RBM19Q9Y4C8 960 aaKnown RBP22.13■■□□□ 1.13
SCARB2-210ENST00000638567 HSPA5P11021 654 aaKnown RBP22.12■■□□□ 1.13
SCARB2-210ENST00000638567 PPP1R15AO75807 674 aaPredicted RBP22.12■■□□□ 1.13
SCARB2-210ENST00000638567 TSHZ2Q9NRE2 1034 aa22.1■■□□□ 1.13
SCARB2-210ENST00000638567 ARHGAP35Q9NRY4 1499 aa22.1■■□□□ 1.13
SCARB2-210ENST00000638567 KCNH8Q96L42 1107 aa22.09■■□□□ 1.13
SCARB2-210ENST00000638567 EIF5BO60841 1220 aaKnown RBP22.09■■□□□ 1.13
SCARB2-210ENST00000638567 SMARCA2P51531 1590 aa22.07■■□□□ 1.12
SCARB2-210ENST00000638567 SLC24A1O60721 1099 aa22.06■■□□□ 1.12
SCARB2-210ENST00000638567 FOXD1Q16676 465 aa22.06■■□□□ 1.12
SCARB2-210ENST00000638567 SMARCA4P51532 1647 aa22.02■■□□□ 1.12
SCARB2-210ENST00000638567 HSP90AA1P07900 732 aaKnown RBP22.01■■□□□ 1.11
SCARB2-210ENST00000638567 ARXQ96QS3 562 aa21.97■■□□□ 1.11
SCARB2-210ENST00000638567 ATAD2BQ9ULI0 1458 aa21.96■■□□□ 1.11
SCARB2-210ENST00000638567 NOP58Q9Y2X3 529 aaKnown RBP21.95■■□□□ 1.1
SCARB2-210ENST00000638567 KNSTRNQ9Y448 316 aa21.95■■□□□ 1.1
SCARB2-210ENST00000638567 EIF4G1Q04637 1599 aaKnown RBP21.95■■□□□ 1.1
SCARB2-210ENST00000638567 STAG3Q9UJ98 1225 aa21.94■■□□□ 1.1
SCARB2-210ENST00000638567 DCAF11Q8TEB1 546 aa21.93■■□□□ 1.1
SCARB2-210ENST00000638567 MPHOSPH9Q99550 1183 aa21.93■■□□□ 1.1
SCARB2-210ENST00000638567 FHOD3Q2V2M9 1422 aa21.92■■□□□ 1.1
SCARB2-210ENST00000638567 DDRGK1Q96HY6 314 aa21.92■■□□□ 1.1
SCARB2-210ENST00000638567 TDRD9Q8NDG6 1382 aaKnown RBP21.91■■□□□ 1.1
SCARB2-210ENST00000638567 CC2D1BQ5T0F9 858 aaKnown RBP21.91■■□□□ 1.1
SCARB2-210ENST00000638567 NPM1P06748 294 aaKnown RBP eCLIP21.9■■□□□ 1.1
SCARB2-210ENST00000638567 FMN1Q68DA7 1419 aa21.9■■□□□ 1.1
SCARB2-210ENST00000638567 LAS1LQ9Y4W2 734 aaKnown RBP21.89■■□□□ 1.1
SCARB2-210ENST00000638567 L3MBTL2Q969R5 705 aa21.88■■□□□ 1.09
SCARB2-210ENST00000638567 SENP3Q9H4L4 574 aaPredicted RBP21.87■■□□□ 1.09
SCARB2-210ENST00000638567 PKD2Q13563 968 aa21.87■■□□□ 1.09
SCARB2-210ENST00000638567 CDCA8Q53HL2 280 aa21.85■■□□□ 1.09
SCARB2-210ENST00000638567 RGS3P49796 1198 aa21.83■■□□□ 1.09
SCARB2-210ENST00000638567 ERICH6BQ5W0A0 696 aa21.82■■□□□ 1.08
SCARB2-210ENST00000638567 ANP32BQ92688 251 aaKnown RBP21.82■■□□□ 1.08
SCARB2-210ENST00000638567 NEUROD2Q15784 382 aa21.82■■□□□ 1.08
SCARB2-210ENST00000638567 PPM1GO15355 546 aaPredicted RBP21.8■■□□□ 1.08
SCARB2-210ENST00000638567 CADPSQ9ULU8 1353 aa21.79■■□□□ 1.08
SCARB2-210ENST00000638567 ESF1Q9H501 851 aaKnown RBP21.77■■□□□ 1.08
SCARB2-210ENST00000638567 BECN1Q14457 450 aa21.77■■□□□ 1.08
SCARB2-210ENST00000638567 TMF1P82094 1093 aa21.74■■□□□ 1.07
SCARB2-210ENST00000638567 KIF21BO75037 1637 aa21.73■■□□□ 1.07
SCARB2-210ENST00000638567 DEKP35659 375 aaKnown RBP21.72■■□□□ 1.07
SCARB2-210ENST00000638567 FRAT1Q92837 279 aaPredicted RBP21.71■■□□□ 1.07
SCARB2-210ENST00000638567 CFAP53Q96M91 514 aa21.71■■□□□ 1.07
SCARB2-210ENST00000638567 TNNT2P45379 298 aaPredicted RBP21.7■■□□□ 1.06
SCARB2-210ENST00000638567 RTN4Q9NQC3 1192 aaKnown RBP21.69■■□□□ 1.06
SCARB2-210ENST00000638567 NUP155O75694 1391 aa21.68■■□□□ 1.06
SCARB2-210ENST00000638567 RCAN3Q9UKA8 241 aa21.67■■□□□ 1.06
SCARB2-210ENST00000638567 NUDCQ9Y266 331 aa21.67■■□□□ 1.06
SCARB2-210ENST00000638567 IGF1RP08069 1367 aa21.67■■□□□ 1.06
SCARB2-210ENST00000638567 PRKRIP1Q9H875 184 aaPredicted RBP21.64■■□□□ 1.06
SCARB2-210ENST00000638567 KTN1Q86UP2 1357 aaKnown RBP21.64■■□□□ 1.06
SCARB2-210ENST00000638567 FTSJ3Q8IY81 847 aaKnown RBP21.63■■□□□ 1.05
SCARB2-210ENST00000638567 MYH16Q9H6N6 1097 aa21.63■■□□□ 1.05
SCARB2-210ENST00000638567 PLPPR3Q6T4P5 718 aa21.62■■□□□ 1.05
SCARB2-210ENST00000638567 PHLDB1Q86UU1 1377 aa21.62■■□□□ 1.05
SCARB2-210ENST00000638567 RALBP1Q15311 655 aa21.61■■□□□ 1.05
SCARB2-210ENST00000638567 CCDC18Q5T9S5 1454 aa21.61■■□□□ 1.05
SCARB2-210ENST00000638567 ROCK2O75116 1388 aaKnown RBP21.6■■□□□ 1.05
SCARB2-210ENST00000638567 ERCC6Q03468 1493 aa21.59■■□□□ 1.05
SCARB2-210ENST00000638567 PDS5BQ9NTI5 1447 aa21.59■■□□□ 1.05
SCARB2-210ENST00000638567 ANKRD30AQ9BXX3 1397 aa21.59■■□□□ 1.05
SCARB2-210ENST00000638567 ARAP1Q96P48 1450 aa21.57■■□□□ 1.04
SCARB2-210ENST00000638567 TCERG1O14776 1098 aaKnown RBP21.54■■□□□ 1.04
SCARB2-210ENST00000638567 SYNJ1O43426 1573 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms