RNA–Protein interactions for RNA: ENST00000638443.1

ATM-226, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 2,146 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-226ENST00000638443 PRKCSHP14314 528 aaPredicted RBP15.5■□□□□ 0.07
ATM-226ENST00000638443 AQRO60306 1485 aaKnown RBP eCLIP15.5■□□□□ 0.07
ATM-226ENST00000638443 ZNF608Q9ULD9 1512 aaPredicted RBP15.49■□□□□ 0.07
ATM-226ENST00000638443 CUL7Q14999 1698 aa15.49■□□□□ 0.07
ATM-226ENST00000638443 ARAP1Q96P48 1450 aa15.49■□□□□ 0.07
ATM-226ENST00000638443 VPS8Q8N3P4 1428 aa15.47■□□□□ 0.07
ATM-226ENST00000638443 PBRM1Q86U86 1689 aa15.46■□□□□ 0.06
ATM-226ENST00000638443 ARHGAP35Q9NRY4 1499 aa15.45■□□□□ 0.06
ATM-226ENST00000638443 IFT140Q96RY7 1462 aa15.43■□□□□ 0.06
ATM-226ENST00000638443 EIF4G3O43432 1585 aaKnown RBP15.4■□□□□ 0.06
ATM-226ENST00000638443 ADAMTS12P58397 1594 aa15.38■□□□□ 0.05
ATM-226ENST00000638443 CTTNBP2Q8WZ74 1663 aa15.38■□□□□ 0.05
ATM-226ENST00000638443 GRIN2BQ13224 1484 aa15.36■□□□□ 0.05
ATM-226ENST00000638443 P3H3Q8IVL6 736 aa15.35■□□□□ 0.05
ATM-226ENST00000638443 ADRA2BP18089 450 aa15.34■□□□□ 0.05
ATM-226ENST00000638443 SNAPC4Q5SXM2 1469 aa15.33■□□□□ 0.04
ATM-226ENST00000638443 FHAD1B1AJZ9 1412 aa15.33■□□□□ 0.04
ATM-226ENST00000638443 FHOD3Q2V2M9 1422 aa15.31■□□□□ 0.04
ATM-226ENST00000638443 APLP2Q06481 763 aa15.26■□□□□ 0.03
ATM-226ENST00000638443 KANK4Q5T7N3 995 aaPredicted RBP15.26■□□□□ 0.03
ATM-226ENST00000638443 PCF11O94913 1555 aaKnown RBP15.25■□□□□ 0.03
ATM-226ENST00000638443 EFCAB5A4FU69 1503 aa15.24■□□□□ 0.03
ATM-226ENST00000638443 HRCP23327 699 aa15.23■□□□□ 0.03
ATM-226ENST00000638443 SAMD9Q5K651 1589 aa15.23■□□□□ 0.03
ATM-226ENST00000638443 GRIN2AQ12879 1464 aa15.22■□□□□ 0.03
ATM-226ENST00000638443 IQGAP2Q13576 1575 aa15.21■□□□□ 0.03
ATM-226ENST00000638443 MAGI1Q96QZ7 1491 aaPredicted RBP15.2■□□□□ 0.02
ATM-226ENST00000638443 FBLN2P98095 1184 aa15.19■□□□□ 0.02
ATM-226ENST00000638443 ATP1B4Q9UN42 357 aaPredicted RBP15.17■□□□□ 0.02
ATM-226ENST00000638443 SYNJ2O15056 1496 aa15.17■□□□□ 0.02
ATM-226ENST00000638443 TIAM1Q13009 1591 aa15.17■□□□□ 0.02
ATM-226ENST00000638443 CEP170Q5SW79 1584 aa15.16■□□□□ 0.02
ATM-226ENST00000638443 CHMP7Q8WUX9 453 aaPredicted RBP15.15■□□□□ 0.02
ATM-226ENST00000638443 ARXQ96QS3 562 aa15.14■□□□□ 0.01
ATM-226ENST00000638443 FYCO1Q9BQS8 1478 aa15.13■□□□□ 0.01
ATM-226ENST00000638443 CFAP43Q8NDM7 1665 aa15.12■□□□□ 0.01
ATM-226ENST00000638443 TIMELESSQ9UNS1 1208 aa15.12■□□□□ 0.01
ATM-226ENST00000638443 KIAA0586Q9BVV6 1533 aa15.12■□□□□ 0.01
ATM-226ENST00000638443 CASKIN1Q8WXD9 1431 aa15.12■□□□□ 0.01
ATM-226ENST00000638443 FMN1Q68DA7 1419 aa15.11■□□□□ 0.01
ATM-226ENST00000638443 LRRIQ1Q96JM4 1722 aa15.1■□□□□ 0.01
ATM-226ENST00000638443 UGGT2Q9NYU1 1516 aa15.1■□□□□ 0.01
ATM-226ENST00000638443 LRRC9Q6ZRR7 1453 aa15.09■□□□□ 0.01
ATM-226ENST00000638443 DISP1Q96F81 1524 aa15.08■□□□□ 0.01
ATM-226ENST00000638443 HNRNPUL2Q1KMD3 747 aaKnown RBP15.08■□□□□ 0.01
ATM-226ENST00000638443 MAP3K1Q13233 1512 aa15.08■□□□□ 0
ATM-226ENST00000638443 NUP160Q12769 1436 aa15.07■□□□□ 0
ATM-226ENST00000638443 KIAA0556O60303 1618 aa15.07■□□□□ 0
ATM-226ENST00000638443 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.07■□□□□ 0
ATM-226ENST00000638443 CHD1O14646 1710 aa15.04■□□□□ -0
ATM-226ENST00000638443 ARID3CA6NKF2 412 aa15.03■□□□□ -0
ATM-226ENST00000638443 PPP6R1Q9UPN7 881 aa15.03■□□□□ -0
ATM-226ENST00000638443 PHLDB1Q86UU1 1377 aa15.02■□□□□ -0
ATM-226ENST00000638443 RRBP1Q9P2E9 1410 aaKnown RBP15.01□□□□□ -0.01
ATM-226ENST00000638443 SLC4A1APQ9BWU0 796 aaKnown RBP15.01□□□□□ -0.01
ATM-226ENST00000638443 CDK13Q14004 1512 aaKnown RBP14.99□□□□□ -0.01
ATM-226ENST00000638443 MAGI3Q5TCQ9 1506 aa14.99□□□□□ -0.01
ATM-226ENST00000638443 TAOK2Q9UL54 1235 aa14.99□□□□□ -0.01
ATM-226ENST00000638443 HECW1Q76N89 1606 aa14.98□□□□□ -0.01
ATM-226ENST00000638443 JPH4Q96JJ6 628 aa14.98□□□□□ -0.01
ATM-226ENST00000638443 CCNB3Q8WWL7 1395 aa14.97□□□□□ -0.01
ATM-226ENST00000638443 MTUS2Q5JR59 1369 aa14.96□□□□□ -0.02
ATM-226ENST00000638443 EPRSP07814 1512 aaKnown RBP14.95□□□□□ -0.02
ATM-226ENST00000638443 CCER1Q8TC90 406 aaPredicted RBP14.95□□□□□ -0.02
ATM-226ENST00000638443 ITGAEP38570 1179 aa14.94□□□□□ -0.02
ATM-226ENST00000638443 PLB1Q6P1J6 1458 aa14.94□□□□□ -0.02
ATM-226ENST00000638443 NUP153P49790 1475 aaKnown RBP14.93□□□□□ -0.02
ATM-226ENST00000638443 RAPGEF6Q8TEU7 1601 aa14.92□□□□□ -0.02
ATM-226ENST00000638443 CCDC18Q5T9S5 1454 aa14.92□□□□□ -0.02
ATM-226ENST00000638443 EHBP1L1Q8N3D4 1523 aa14.91□□□□□ -0.02
ATM-226ENST00000638443 NCOA2Q15596 1464 aa14.9□□□□□ -0.02
ATM-226ENST00000638443 CARMIL2Q6F5E8 1435 aa14.9□□□□□ -0.02
ATM-226ENST00000638443 PRG4Q92954 1404 aaPredicted RBP14.9□□□□□ -0.02
ATM-226ENST00000638443 FAM50AQ14320 339 aaKnown RBP14.89□□□□□ -0.03
ATM-226ENST00000638443 TULP1O00294 542 aaPredicted RBP14.88□□□□□ -0.03
ATM-226ENST00000638443 ERCC6L2Q5T890 1561 aa14.88□□□□□ -0.03
ATM-226ENST00000638443 SUPT6HQ7KZ85 1726 aaKnown RBP14.87□□□□□ -0.03
ATM-226ENST00000638443 FGD6Q6ZV73 1430 aa14.85□□□□□ -0.03
ATM-226ENST00000638443 SHROOM2Q13796 1616 aa14.85□□□□□ -0.03
ATM-226ENST00000638443 ARHGEF11O15085 1522 aa14.84□□□□□ -0.03
ATM-226ENST00000638443 ZEB1P37275 1124 aaPredicted RBP14.83□□□□□ -0.04
ATM-226ENST00000638443 ABCA8O94911 1581 aa14.82□□□□□ -0.04
ATM-226ENST00000638443 CLASP1Q7Z460 1538 aa14.82□□□□□ -0.04
ATM-226ENST00000638443 MYOM3Q5VTT5 1437 aa14.82□□□□□ -0.04
ATM-226ENST00000638443 PTPRGP23470 1445 aa14.78□□□□□ -0.04
ATM-226ENST00000638443 BCANQ96GW7 911 aa14.78□□□□□ -0.04
ATM-226ENST00000638443 PTPN23Q9H3S7 1636 aa14.77□□□□□ -0.05
ATM-226ENST00000638443 KIF14Q15058 1648 aa14.76□□□□□ -0.05
ATM-226ENST00000638443 PTPRKQ15262 1439 aa14.76□□□□□ -0.05
ATM-226ENST00000638443 ATP10BO94823 1461 aa14.75□□□□□ -0.05
ATM-226ENST00000638443 RAB3GAP2Q9H2M9 1393 aa14.75□□□□□ -0.05
ATM-226ENST00000638443 DHX57Q6P158 1386 aaKnown RBP14.74□□□□□ -0.05
ATM-226ENST00000638443 TROQ12816 1431 aaPredicted RBP14.74□□□□□ -0.05
ATM-226ENST00000638443 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.73□□□□□ -0.05
ATM-226ENST00000638443 TPRNQ4KMQ1 711 aa14.72□□□□□ -0.05
ATM-226ENST00000638443 CDK11AQ9UQ88 783 aaPredicted RBP14.7□□□□□ -0.06
ATM-226ENST00000638443 UACAQ9BZF9 1416 aa14.7□□□□□ -0.06
ATM-226ENST00000638443 TCOF1Q13428 1488 aaKnown RBP14.7□□□□□ -0.06
ATM-226ENST00000638443 FOXD1Q16676 465 aa14.69□□□□□ -0.06
ATM-226ENST00000638443 SETD5Q9C0A6 1442 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms