RNA–Protein interactions for RNA: ENST00000638334.1

NECAP1-211, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-211ENST00000638334 CENPBP07199 599 aaPredicted RBP15.18■□□□□ 0.02
NECAP1-211ENST00000638334 LRRC9Q6ZRR7 1453 aa15.16■□□□□ 0.02
NECAP1-211ENST00000638334 DHX57Q6P158 1386 aaKnown RBP15.15■□□□□ 0.02
NECAP1-211ENST00000638334 CTTNBP2Q8WZ74 1663 aa15.15■□□□□ 0.02
NECAP1-211ENST00000638334 KANK4Q5T7N3 995 aaPredicted RBP15.14■□□□□ 0.01
NECAP1-211ENST00000638334 FMN1Q68DA7 1419 aa15.14■□□□□ 0.01
NECAP1-211ENST00000638334 CASKIN1Q8WXD9 1431 aa15.14■□□□□ 0.01
NECAP1-211ENST00000638334 ABCA5Q8WWZ7 1642 aa15.13■□□□□ 0.01
NECAP1-211ENST00000638334 THOC2Q8NI27 1593 aaKnown RBP15.12■□□□□ 0.01
NECAP1-211ENST00000638334 KIF21AQ7Z4S6 1674 aa15.09■□□□□ 0.01
NECAP1-211ENST00000638334 URB2Q14146 1524 aaKnown RBP15.08■□□□□ 0.01
NECAP1-211ENST00000638334 RANGAP1P46060 587 aaPredicted RBP15.08■□□□□ 0
NECAP1-211ENST00000638334 ACIN1Q9UKV3 1341 aaKnown RBP15.08■□□□□ 0
NECAP1-211ENST00000638334 TIMELESSQ9UNS1 1208 aa15.07■□□□□ 0
NECAP1-211ENST00000638334 RAD54L2Q9Y4B4 1467 aa15.07■□□□□ 0
NECAP1-211ENST00000638334 PCF11O94913 1555 aaKnown RBP15.07■□□□□ 0
NECAP1-211ENST00000638334 SAMD9Q5K651 1589 aa15.06■□□□□ 0
NECAP1-211ENST00000638334 GAPVD1Q14C86 1478 aa15.05■□□□□ -0
NECAP1-211ENST00000638334 NESP48681 1621 aa15.03■□□□□ -0
NECAP1-211ENST00000638334 SETD5Q9C0A6 1442 aa15.03■□□□□ -0
NECAP1-211ENST00000638334 SNAPC4Q5SXM2 1469 aa14.99□□□□□ -0.01
NECAP1-211ENST00000638334 TARBP1Q13395 1621 aaKnown RBP14.99□□□□□ -0.01
NECAP1-211ENST00000638334 PHLDB1Q86UU1 1377 aa14.97□□□□□ -0.01
NECAP1-211ENST00000638334 RAB3GAP2Q9H2M9 1393 aa14.97□□□□□ -0.01
NECAP1-211ENST00000638334 SCAF1Q9H7N4 1312 aaKnown RBP14.96□□□□□ -0.01
NECAP1-211ENST00000638334 CCDC18Q5T9S5 1454 aa14.96□□□□□ -0.01
NECAP1-211ENST00000638334 FHOD3Q2V2M9 1422 aa14.95□□□□□ -0.02
NECAP1-211ENST00000638334 EHBP1L1Q8N3D4 1523 aa14.93□□□□□ -0.02
NECAP1-211ENST00000638334 GRIN2BQ13224 1484 aa14.93□□□□□ -0.02
NECAP1-211ENST00000638334 MRC2Q9UBG0 1479 aa14.93□□□□□ -0.02
NECAP1-211ENST00000638334 FGD6Q6ZV73 1430 aa14.92□□□□□ -0.02
NECAP1-211ENST00000638334 MAPKBP1O60336 1514 aa14.91□□□□□ -0.02
NECAP1-211ENST00000638334 SUPT6HQ7KZ85 1726 aaKnown RBP14.89□□□□□ -0.03
NECAP1-211ENST00000638334 MTUS2Q5JR59 1369 aa14.88□□□□□ -0.03
NECAP1-211ENST00000638334 TDRD9Q8NDG6 1382 aaKnown RBP14.88□□□□□ -0.03
NECAP1-211ENST00000638334 PBRM1Q86U86 1689 aa14.88□□□□□ -0.03
NECAP1-211ENST00000638334 NEUROD1Q13562 356 aa14.88□□□□□ -0.03
NECAP1-211ENST00000638334 IFT140Q96RY7 1462 aa14.88□□□□□ -0.03
NECAP1-211ENST00000638334 ARHGEF11O15085 1522 aa14.87□□□□□ -0.03
NECAP1-211ENST00000638334 ADAMTS12P58397 1594 aa14.87□□□□□ -0.03
NECAP1-211ENST00000638334 AKNAQ7Z591 1439 aa14.87□□□□□ -0.03
NECAP1-211ENST00000638334 HECW1Q76N89 1606 aa14.87□□□□□ -0.03
NECAP1-211ENST00000638334 IQGAP2Q13576 1575 aa14.86□□□□□ -0.03
NECAP1-211ENST00000638334 HFM1A2PYH4 1435 aa14.86□□□□□ -0.03
NECAP1-211ENST00000638334 MYOM3Q5VTT5 1437 aa14.86□□□□□ -0.03
NECAP1-211ENST00000638334 UGGT2Q9NYU1 1516 aa14.86□□□□□ -0.03
NECAP1-211ENST00000638334 WDR62O43379 1518 aa14.84□□□□□ -0.03
NECAP1-211ENST00000638334 MIA2Q96PC5 1412 aa14.83□□□□□ -0.04
NECAP1-211ENST00000638334 TCOF1Q13428 1488 aaKnown RBP14.82□□□□□ -0.04
NECAP1-211ENST00000638334 MYT1Q01538 1121 aa14.82□□□□□ -0.04
NECAP1-211ENST00000638334 FAM50AQ14320 339 aaKnown RBP14.82□□□□□ -0.04
NECAP1-211ENST00000638334 MIER1Q8N108 512 aa14.82□□□□□ -0.04
NECAP1-211ENST00000638334 NCOA2Q15596 1464 aa14.82□□□□□ -0.04
NECAP1-211ENST00000638334 UACAQ9BZF9 1416 aa14.81□□□□□ -0.04
NECAP1-211ENST00000638334 KIAA0586Q9BVV6 1533 aa14.78□□□□□ -0.04
NECAP1-211ENST00000638334 P3H3Q8IVL6 736 aa14.78□□□□□ -0.04
NECAP1-211ENST00000638334 PTPN23Q9H3S7 1636 aa14.76□□□□□ -0.05
NECAP1-211ENST00000638334 LRRIQ1Q96JM4 1722 aa14.75□□□□□ -0.05
NECAP1-211ENST00000638334 ITGAEP38570 1179 aa14.75□□□□□ -0.05
NECAP1-211ENST00000638334 EPRSP07814 1512 aaKnown RBP14.75□□□□□ -0.05
NECAP1-211ENST00000638334 ATP1B4Q9UN42 357 aaPredicted RBP14.74□□□□□ -0.05
NECAP1-211ENST00000638334 GTF3C3Q9Y5Q9 886 aa14.74□□□□□ -0.05
NECAP1-211ENST00000638334 MAGI1Q96QZ7 1491 aaPredicted RBP14.73□□□□□ -0.05
NECAP1-211ENST00000638334 NAIPQ13075 1403 aa14.73□□□□□ -0.05
NECAP1-211ENST00000638334 GCC2Q8IWJ2 1684 aa14.72□□□□□ -0.05
NECAP1-211ENST00000638334 PPP1R15AO75807 674 aaPredicted RBP14.69□□□□□ -0.06
NECAP1-211ENST00000638334 ROCK1Q13464 1354 aa14.69□□□□□ -0.06
NECAP1-211ENST00000638334 KIAA0556O60303 1618 aa14.68□□□□□ -0.06
NECAP1-211ENST00000638334 CDK11AQ9UQ88 783 aaPredicted RBP14.67□□□□□ -0.06
NECAP1-211ENST00000638334 GRIN2AQ12879 1464 aa14.67□□□□□ -0.06
NECAP1-211ENST00000638334 TONSLQ96HA7 1378 aa14.65□□□□□ -0.06
NECAP1-211ENST00000638334 MAGI3Q5TCQ9 1506 aa14.65□□□□□ -0.06
NECAP1-211ENST00000638334 PTPRKQ15262 1439 aa14.65□□□□□ -0.06
NECAP1-211ENST00000638334 DISP1Q96F81 1524 aa14.63□□□□□ -0.07
NECAP1-211ENST00000638334 EIF4G3O43432 1585 aaKnown RBP14.63□□□□□ -0.07
NECAP1-211ENST00000638334 SYNJ2O15056 1496 aa14.63□□□□□ -0.07
NECAP1-211ENST00000638334 RAPGEF6Q8TEU7 1601 aa14.62□□□□□ -0.07
NECAP1-211ENST00000638334 CCER2I3L3R5 266 aa14.6□□□□□ -0.07
NECAP1-211ENST00000638334 CARMIL2Q6F5E8 1435 aa14.59□□□□□ -0.07
NECAP1-211ENST00000638334 DNMT1P26358 1616 aaKnown RBP14.59□□□□□ -0.07
NECAP1-211ENST00000638334 ZNF608Q9ULD9 1512 aaPredicted RBP14.58□□□□□ -0.08
NECAP1-211ENST00000638334 DNAJC5BQ9UF47 199 aa14.58□□□□□ -0.08
NECAP1-211ENST00000638334 ADCY10Q96PN6 1610 aa14.58□□□□□ -0.08
NECAP1-211ENST00000638334 ITSN2Q9NZM3 1697 aa14.58□□□□□ -0.08
NECAP1-211ENST00000638334 NUP160Q12769 1436 aa14.58□□□□□ -0.08
NECAP1-211ENST00000638334 NUP153P49790 1475 aaKnown RBP14.57□□□□□ -0.08
NECAP1-211ENST00000638334 YTHDC1Q96MU7 727 aaKnown RBP14.57□□□□□ -0.08
NECAP1-211ENST00000638334 SIN3AQ96ST3 1273 aa14.57□□□□□ -0.08
NECAP1-211ENST00000638334 TROQ12816 1431 aaPredicted RBP14.57□□□□□ -0.08
NECAP1-211ENST00000638334 ERCC6Q03468 1493 aa14.55□□□□□ -0.08
NECAP1-211ENST00000638334 CDK13Q14004 1512 aaKnown RBP14.55□□□□□ -0.08
NECAP1-211ENST00000638334 DAPK1P53355 1430 aa14.54□□□□□ -0.08
NECAP1-211ENST00000638334 ADGRL2O95490 1459 aa14.51□□□□□ -0.09
NECAP1-211ENST00000638334 KDM5BQ9UGL1 1544 aa14.51□□□□□ -0.09
NECAP1-211ENST00000638334 ABCC5O15440 1437 aa14.49□□□□□ -0.09
NECAP1-211ENST00000638334 ADGBQ8N7X0 1667 aa14.49□□□□□ -0.09
NECAP1-211ENST00000638334 CEP170Q5SW79 1584 aa14.48□□□□□ -0.09
NECAP1-211ENST00000638334 ANP32CO43423 234 aa14.48□□□□□ -0.09
NECAP1-211ENST00000638334 SHANK2Q9UPX8 1470 aa14.48□□□□□ -0.09
NECAP1-211ENST00000638334 CHMP7Q8WUX9 453 aaPredicted RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms