RNA–Protein interactions for RNA: ENST00000638144.1

CLN6-225, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-225ENST00000638144 CHIC1Q5VXU3 224 aa21.13■□□□□ 0.97
CLN6-225ENST00000638144 RAPGEF2Q9Y4G8 1499 aa21.1■□□□□ 0.97
CLN6-225ENST00000638144 PRG4Q92954 1404 aaPredicted RBP21.08■□□□□ 0.97
CLN6-225ENST00000638144 KIAA0586Q9BVV6 1533 aa21.08■□□□□ 0.96
CLN6-225ENST00000638144 JPH4Q96JJ6 628 aa21.06■□□□□ 0.96
CLN6-225ENST00000638144 FAM9AQ8IZU1 332 aaPredicted RBP21.04■□□□□ 0.96
CLN6-225ENST00000638144 PRXQ9BXM0 1461 aa21.02■□□□□ 0.96
CLN6-225ENST00000638144 IQGAP2Q13576 1575 aa21.02■□□□□ 0.95
CLN6-225ENST00000638144 CTTNBP2Q8WZ74 1663 aa20.98■□□□□ 0.95
CLN6-225ENST00000638144 CSRNP3Q8WYN3 585 aa20.97■□□□□ 0.95
CLN6-225ENST00000638144 EEA1Q15075 1411 aa20.95■□□□□ 0.95
CLN6-225ENST00000638144 TTBK1Q5TCY1 1321 aaPredicted RBP20.9■□□□□ 0.94
CLN6-225ENST00000638144 UGGT2Q9NYU1 1516 aa20.87■□□□□ 0.93
CLN6-225ENST00000638144 EHMT2Q96KQ7 1210 aa20.86■□□□□ 0.93
CLN6-225ENST00000638144 DISP1Q96F81 1524 aa20.86■□□□□ 0.93
CLN6-225ENST00000638144 KIAA0556O60303 1618 aa20.84■□□□□ 0.93
CLN6-225ENST00000638144 CARMIL2Q6F5E8 1435 aa20.84■□□□□ 0.93
CLN6-225ENST00000638144 KIF21BO75037 1637 aa20.83■□□□□ 0.93
CLN6-225ENST00000638144 ADCY10Q96PN6 1610 aa20.81■□□□□ 0.92
CLN6-225ENST00000638144 TNIKQ9UKE5 1360 aa20.79■□□□□ 0.92
CLN6-225ENST00000638144 PTPRGP23470 1445 aa20.78■□□□□ 0.92
CLN6-225ENST00000638144 TRHP20396 242 aaPredicted RBP20.77■□□□□ 0.92
CLN6-225ENST00000638144 RANGAP1P46060 587 aaPredicted RBP20.74■□□□□ 0.91
CLN6-225ENST00000638144 GOLGA3Q08378 1498 aa20.71■□□□□ 0.91
CLN6-225ENST00000638144 P3H3Q8IVL6 736 aa20.69■□□□□ 0.9
CLN6-225ENST00000638144 SAMD9Q5K651 1589 aa20.68■□□□□ 0.9
CLN6-225ENST00000638144 UACAQ9BZF9 1416 aa20.65■□□□□ 0.9
CLN6-225ENST00000638144 UBTFP17480 764 aaKnown RBP20.65■□□□□ 0.9
CLN6-225ENST00000638144 ABCC2Q92887 1545 aa20.64■□□□□ 0.9
CLN6-225ENST00000638144 PLB1Q6P1J6 1458 aa20.63■□□□□ 0.89
CLN6-225ENST00000638144 NPM1P06748 294 aaKnown RBP eCLIP20.63■□□□□ 0.89
CLN6-225ENST00000638144 KIF13AQ9H1H9 1805 aa20.61■□□□□ 0.89
CLN6-225ENST00000638144 UHRF1BP1LA0JNW5 1464 aa20.61■□□□□ 0.89
CLN6-225ENST00000638144 MAPKBP1O60336 1514 aa20.6■□□□□ 0.89
CLN6-225ENST00000638144 FHOD3Q2V2M9 1422 aa20.59■□□□□ 0.89
CLN6-225ENST00000638144 ABCA8O94911 1581 aa20.59■□□□□ 0.89
CLN6-225ENST00000638144 ZCCHC11Q5TAX3 1644 aaKnown RBP20.57■□□□□ 0.88
CLN6-225ENST00000638144 DIP2BQ9P265 1576 aa20.54■□□□□ 0.88
CLN6-225ENST00000638144 EFCAB5A4FU69 1503 aa20.53■□□□□ 0.88
CLN6-225ENST00000638144 KDM5BQ9UGL1 1544 aa20.53■□□□□ 0.88
CLN6-225ENST00000638144 ARID3CA6NKF2 412 aa20.53■□□□□ 0.88
CLN6-225ENST00000638144 ASXL2Q76L83 1435 aa20.52■□□□□ 0.87
CLN6-225ENST00000638144 ABCC10Q5T3U5 1492 aa20.51■□□□□ 0.87
CLN6-225ENST00000638144 RAPGEF6Q8TEU7 1601 aa20.49■□□□□ 0.87
CLN6-225ENST00000638144 FAM69CQ0P6D2 419 aa20.48■□□□□ 0.87
CLN6-225ENST00000638144 ARHGAP35Q9NRY4 1499 aa20.47■□□□□ 0.87
CLN6-225ENST00000638144 TSPOAP1O95153 1857 aa20.45■□□□□ 0.86
CLN6-225ENST00000638144 NUP153P49790 1475 aaKnown RBP20.41■□□□□ 0.86
CLN6-225ENST00000638144 ATP10BO94823 1461 aa20.4■□□□□ 0.86
CLN6-225ENST00000638144 EPRSP07814 1512 aaKnown RBP20.39■□□□□ 0.85
CLN6-225ENST00000638144 WDR7Q9Y4E6 1490 aa20.39■□□□□ 0.85
CLN6-225ENST00000638144 GLI2P10070 1586 aa20.35■□□□□ 0.85
CLN6-225ENST00000638144 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.34■□□□□ 0.85
CLN6-225ENST00000638144 HNRNPUL2Q1KMD3 747 aaKnown RBP20.34■□□□□ 0.85
CLN6-225ENST00000638144 CLIP1P30622 1438 aa20.34■□□□□ 0.85
CLN6-225ENST00000638144 PPRC1Q5VV67 1664 aaKnown RBP20.33■□□□□ 0.85
CLN6-225ENST00000638144 KCNH8Q96L42 1107 aa20.33■□□□□ 0.85
CLN6-225ENST00000638144 CDK13Q14004 1512 aaKnown RBP20.32■□□□□ 0.84
CLN6-225ENST00000638144 LOC105371045A0A1W2PR82 267 aa20.32■□□□□ 0.84
CLN6-225ENST00000638144 FMN1Q68DA7 1419 aa20.32■□□□□ 0.84
CLN6-225ENST00000638144 MAP3K4Q9Y6R4 1608 aa20.31■□□□□ 0.84
CLN6-225ENST00000638144 ATP1B4Q9UN42 357 aaPredicted RBP20.31■□□□□ 0.84
CLN6-225ENST00000638144 HECW1Q76N89 1606 aa20.3■□□□□ 0.84
CLN6-225ENST00000638144 PCF11O94913 1555 aaKnown RBP20.29■□□□□ 0.84
CLN6-225ENST00000638144 LRRIQ1Q96JM4 1722 aa20.28■□□□□ 0.84
CLN6-225ENST00000638144 CEP162Q5TB80 1403 aa20.26■□□□□ 0.83
CLN6-225ENST00000638144 CFAP43Q8NDM7 1665 aa20.24■□□□□ 0.83
CLN6-225ENST00000638144 KDM6BO15054 1643 aa20.22■□□□□ 0.83
CLN6-225ENST00000638144 CD109Q6YHK3 1445 aa20.19■□□□□ 0.82
CLN6-225ENST00000638144 ABCA9Q8IUA7 1624 aa20.19■□□□□ 0.82
CLN6-225ENST00000638144 CASKIN1Q8WXD9 1431 aa20.19■□□□□ 0.82
CLN6-225ENST00000638144 PLEKHD1A6NEE1 506 aa20.16■□□□□ 0.82
CLN6-225ENST00000638144 TEX14Q8IWB6 1497 aa20.16■□□□□ 0.82
CLN6-225ENST00000638144 FYCO1Q9BQS8 1478 aa20.15■□□□□ 0.82
CLN6-225ENST00000638144 TTC37Q6PGP7 1564 aa20.15■□□□□ 0.82
CLN6-225ENST00000638144 MAGI3Q5TCQ9 1506 aa20.13■□□□□ 0.81
CLN6-225ENST00000638144 KIF14Q15058 1648 aa20.12■□□□□ 0.81
CLN6-225ENST00000638144 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.12■□□□□ 0.812e-6■■■■□ 19.9
CLN6-225ENST00000638144 COL17A1Q9UMD9 1497 aaPredicted RBP20.11■□□□□ 0.81
CLN6-225ENST00000638144 CCDC18Q5T9S5 1454 aa20.1■□□□□ 0.81
CLN6-225ENST00000638144 TROQ12816 1431 aaPredicted RBP20.06■□□□□ 0.8
CLN6-225ENST00000638144 CDK11AQ9UQ88 783 aaPredicted RBP20.04■□□□□ 0.8
CLN6-225ENST00000638144 MYO5CQ9NQX4 1742 aa20.02■□□□□ 0.79
CLN6-225ENST00000638144 VPS8Q8N3P4 1428 aa19.98■□□□□ 0.79
CLN6-225ENST00000638144 FANCAO15360 1455 aa19.98■□□□□ 0.79
CLN6-225ENST00000638144 NEO1Q92859 1461 aa19.98■□□□□ 0.79
CLN6-225ENST00000638144 ARAP3Q8WWN8 1544 aa19.96■□□□□ 0.79
CLN6-225ENST00000638144 CFAP74Q9C0B2 1584 aa19.95■□□□□ 0.78
CLN6-225ENST00000638144 PLCH2O75038 1416 aa19.94■□□□□ 0.78
CLN6-225ENST00000638144 FRMPD1Q5SYB0 1578 aa19.94■□□□□ 0.78
CLN6-225ENST00000638144 CDC42BPBQ9Y5S2 1711 aa19.93■□□□□ 0.78
CLN6-225ENST00000638144 AKNAQ7Z591 1439 aa19.93■□□□□ 0.78
CLN6-225ENST00000638144 ARHGAP5Q13017 1502 aa19.92■□□□□ 0.78
CLN6-225ENST00000638144 RAPGEF3O95398 923 aa19.92■□□□□ 0.78
CLN6-225ENST00000638144 MTUS2Q5JR59 1369 aa19.92■□□□□ 0.78
CLN6-225ENST00000638144 PREX2Q70Z35 1606 aa19.91■□□□□ 0.78
CLN6-225ENST00000638144 CDC42BPAQ5VT25 1732 aa19.91■□□□□ 0.78
CLN6-225ENST00000638144 TIAM1Q13009 1591 aa19.91■□□□□ 0.78
CLN6-225ENST00000638144 RICTORQ6R327 1708 aa19.89■□□□□ 0.77
CLN6-225ENST00000638144 PHLDB1Q86UU1 1377 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms