RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 PRG4Q92954 1404 aaPredicted RBP28.69■■■□□ 2.18
CACNA1A-259ENST00000638114 CARMIL1Q5VZK9 1371 aa28.68■■■□□ 2.18
CACNA1A-259ENST00000638114 TRHP20396 242 aaPredicted RBP28.66■■■□□ 2.18
CACNA1A-259ENST00000638114 KIAA0586Q9BVV6 1533 aa28.62■■■□□ 2.17
CACNA1A-259ENST00000638114 RAPGEF2Q9Y4G8 1499 aa28.47■■■□□ 2.15
CACNA1A-259ENST00000638114 IQGAP2Q13576 1575 aa28.43■■■□□ 2.14
CACNA1A-259ENST00000638114 CARMIL2Q6F5E8 1435 aa28.35■■■□□ 2.13
CACNA1A-259ENST00000638114 ADCY10Q96PN6 1610 aa28.3■■■□□ 2.12
CACNA1A-259ENST00000638114 PTPRGP23470 1445 aa28.29■■■□□ 2.12
CACNA1A-259ENST00000638114 TTBK1Q5TCY1 1321 aaPredicted RBP28.29■■■□□ 2.12
CACNA1A-259ENST00000638114 TNIKQ9UKE5 1360 aa28.27■■■□□ 2.12
CACNA1A-259ENST00000638114 NPM1P06748 294 aaKnown RBP eCLIP28.27■■■□□ 2.12
CACNA1A-259ENST00000638114 PRXQ9BXM0 1461 aa28.27■■■□□ 2.12
CACNA1A-259ENST00000638114 CTTNBP2Q8WZ74 1663 aa28.25■■■□□ 2.11
CACNA1A-259ENST00000638114 DISP1Q96F81 1524 aa28.24■■■□□ 2.11
CACNA1A-259ENST00000638114 UGGT2Q9NYU1 1516 aa28.24■■■□□ 2.11
CACNA1A-259ENST00000638114 CSRNP3Q8WYN3 585 aa28.17■■■□□ 2.1
CACNA1A-259ENST00000638114 MAPKBP1O60336 1514 aa28.17■■■□□ 2.1
CACNA1A-259ENST00000638114 KIAA0556O60303 1618 aa28.16■■■□□ 2.1
CACNA1A-259ENST00000638114 KIF13AQ9H1H9 1805 aa28.15■■■□□ 2.1
CACNA1A-259ENST00000638114 EEA1Q15075 1411 aa28.13■■■□□ 2.09
CACNA1A-259ENST00000638114 ABCC10Q5T3U5 1492 aa28.09■■■□□ 2.09
CACNA1A-259ENST00000638114 UACAQ9BZF9 1416 aa28.09■■■□□ 2.09
CACNA1A-259ENST00000638114 ABCC2Q92887 1545 aa28.08■■■□□ 2.08
CACNA1A-259ENST00000638114 FAM69CQ0P6D2 419 aa28.07■■■□□ 2.08
CACNA1A-259ENST00000638114 GOLGA3Q08378 1498 aa28.07■■■□□ 2.08
CACNA1A-259ENST00000638114 UHRF1BP1LA0JNW5 1464 aa28.06■■■□□ 2.08
CACNA1A-259ENST00000638114 FAM9AQ8IZU1 332 aaPredicted RBP28.05■■■□□ 2.08
CACNA1A-259ENST00000638114 DIP2BQ9P265 1576 aa28.05■■■□□ 2.08
CACNA1A-259ENST00000638114 CHIC1Q5VXU3 224 aa28.01■■■□□ 2.07
CACNA1A-259ENST00000638114 ASXL2Q76L83 1435 aa27.95■■■□□ 2.07
CACNA1A-259ENST00000638114 KDM5BQ9UGL1 1544 aa27.93■■■□□ 2.06
CACNA1A-259ENST00000638114 PLB1Q6P1J6 1458 aa27.93■■■□□ 2.06
CACNA1A-259ENST00000638114 ZCCHC11Q5TAX3 1644 aaKnown RBP27.91■■■□□ 2.06
CACNA1A-259ENST00000638114 KIF21BO75037 1637 aa27.89■■■□□ 2.05
CACNA1A-259ENST00000638114 P3H3Q8IVL6 736 aa27.88■■■□□ 2.05
CACNA1A-259ENST00000638114 ABCA8O94911 1581 aa27.86■■■□□ 2.05
CACNA1A-259ENST00000638114 TSPOAP1O95153 1857 aa27.86■■■□□ 2.05
CACNA1A-259ENST00000638114 SAMD9Q5K651 1589 aa27.84■■■□□ 2.05
CACNA1A-259ENST00000638114 RANGAP1P46060 587 aaPredicted RBP27.81■■■□□ 2.04
CACNA1A-259ENST00000638114 GLI2P10070 1586 aa27.8■■■□□ 2.04
CACNA1A-259ENST00000638114 EPRSP07814 1512 aaKnown RBP27.77■■■□□ 2.04
CACNA1A-259ENST00000638114 EHMT2Q96KQ7 1210 aa27.75■■■□□ 2.03
CACNA1A-259ENST00000638114 WDR7Q9Y4E6 1490 aa27.75■■■□□ 2.03
CACNA1A-259ENST00000638114 KDM6BO15054 1643 aa27.71■■■□□ 2.03
CACNA1A-259ENST00000638114 FHOD3Q2V2M9 1422 aa27.69■■■□□ 2.02
CACNA1A-259ENST00000638114 ARID3CA6NKF2 412 aa27.69■■■□□ 2.02
CACNA1A-259ENST00000638114 PPRC1Q5VV67 1664 aaKnown RBP27.68■■■□□ 2.02
CACNA1A-259ENST00000638114 MAP3K4Q9Y6R4 1608 aa27.68■■■□□ 2.02
CACNA1A-259ENST00000638114 UBTFP17480 764 aaKnown RBP27.68■■■□□ 2.02
CACNA1A-259ENST00000638114 RAPGEF6Q8TEU7 1601 aa27.67■■■□□ 2.02
CACNA1A-259ENST00000638114 EFCAB5A4FU69 1503 aa27.66■■■□□ 2.02
CACNA1A-259ENST00000638114 ATP10BO94823 1461 aa27.64■■■□□ 2.01
CACNA1A-259ENST00000638114 KCNH8Q96L42 1107 aa27.62■■■□□ 2.01
CACNA1A-259ENST00000638114 TEX14Q8IWB6 1497 aa27.58■■■□□ 2.01
CACNA1A-259ENST00000638114 NUP153P49790 1475 aaKnown RBP27.55■■■□□ 2
CACNA1A-259ENST00000638114 CFAP43Q8NDM7 1665 aa27.55■■■□□ 2
CACNA1A-259ENST00000638114 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.54■■■□□ 2
CACNA1A-259ENST00000638114 HNRNPUL2Q1KMD3 747 aaKnown RBP27.54■■■□□ 2
CACNA1A-259ENST00000638114 CD109Q6YHK3 1445 aa27.53■■■□□ 2
CACNA1A-259ENST00000638114 AEBP2Q6ZN18 517 aaPredicted RBP27.49■■□□□ 1.99
CACNA1A-259ENST00000638114 MAGI3Q5TCQ9 1506 aa27.48■■□□□ 1.99
CACNA1A-259ENST00000638114 ARHGAP35Q9NRY4 1499 aa27.46■■□□□ 1.99
CACNA1A-259ENST00000638114 COL17A1Q9UMD9 1497 aaPredicted RBP27.45■■□□□ 1.99
CACNA1A-259ENST00000638114 ABCA9Q8IUA7 1624 aa27.41■■□□□ 1.98
CACNA1A-259ENST00000638114 FMN1Q68DA7 1419 aa27.41■■□□□ 1.98
CACNA1A-259ENST00000638114 PLEKHD1A6NEE1 506 aa27.37■■□□□ 1.97
CACNA1A-259ENST00000638114 ATP1B4Q9UN42 357 aaPredicted RBP27.35■■□□□ 1.97
CACNA1A-259ENST00000638114 CDK13Q14004 1512 aaKnown RBP27.35■■□□□ 1.97
CACNA1A-259ENST00000638114 HECW1Q76N89 1606 aa27.34■■□□□ 1.97
CACNA1A-259ENST00000638114 ARAP3Q8WWN8 1544 aa27.25■■□□□ 1.95
CACNA1A-259ENST00000638114 PHLDB1Q86UU1 1377 aa27.22■■□□□ 1.95
CACNA1A-259ENST00000638114 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.22■■□□□ 1.95
CACNA1A-259ENST00000638114 NEO1Q92859 1461 aa27.22■■□□□ 1.95
CACNA1A-259ENST00000638114 KDM4FA0A1W2PPD8 638 aa27.22■■□□□ 1.95
CACNA1A-259ENST00000638114 CLIP1P30622 1438 aa27.2■■□□□ 1.94
CACNA1A-259ENST00000638114 TTC37Q6PGP7 1564 aa27.2■■□□□ 1.94
CACNA1A-259ENST00000638114 CDK11AQ9UQ88 783 aaPredicted RBP27.18■■□□□ 1.94
CACNA1A-259ENST00000638114 PCF11O94913 1555 aaKnown RBP27.18■■□□□ 1.94
CACNA1A-259ENST00000638114 LRRIQ1Q96JM4 1722 aa27.16■■□□□ 1.94
CACNA1A-259ENST00000638114 CASKIN1Q8WXD9 1431 aa27.15■■□□□ 1.94
CACNA1A-259ENST00000638114 ADGRL1O94910 1474 aa27.13■■□□□ 1.93
CACNA1A-259ENST00000638114 CFAP74Q9C0B2 1584 aa27.13■■□□□ 1.93
CACNA1A-259ENST00000638114 FANCAO15360 1455 aa27.13■■□□□ 1.93
CACNA1A-259ENST00000638114 RAPGEF3O95398 923 aa27.11■■□□□ 1.93
CACNA1A-259ENST00000638114 TROQ12816 1431 aaPredicted RBP27.09■■□□□ 1.93
CACNA1A-259ENST00000638114 KIF14Q15058 1648 aa27.08■■□□□ 1.93
CACNA1A-259ENST00000638114 AKNAQ7Z591 1439 aa27.08■■□□□ 1.93
CACNA1A-259ENST00000638114 CCDC18Q5T9S5 1454 aa27.08■■□□□ 1.93
CACNA1A-259ENST00000638114 FYCO1Q9BQS8 1478 aa27.07■■□□□ 1.92
CACNA1A-259ENST00000638114 FRMPD1Q5SYB0 1578 aa27.06■■□□□ 1.92
CACNA1A-259ENST00000638114 PLCH2O75038 1416 aa27.05■■□□□ 1.92
CACNA1A-259ENST00000638114 DENND4BO75064 1496 aaPredicted RBP27.05■■□□□ 1.92
CACNA1A-259ENST00000638114 MYO5CQ9NQX4 1742 aa27.04■■□□□ 1.92
CACNA1A-259ENST00000638114 RICTORQ6R327 1708 aa27■■□□□ 1.91
CACNA1A-259ENST00000638114 CEP162Q5TB80 1403 aa26.99■■□□□ 1.91
CACNA1A-259ENST00000638114 EFCAB2Q5VUJ9 269 aa26.95■■□□□ 1.9
CACNA1A-259ENST00000638114 ARHGAP5Q13017 1502 aa26.94■■□□□ 1.9
CACNA1A-259ENST00000638114 SCAPERQ9BY12 1400 aa26.93■■□□□ 1.9
CACNA1A-259ENST00000638114 ARHGEF40Q8TER5 1519 aa26.91■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms