RNA–Protein interactions for RNA: ENST00000638041.1

MECP2-225, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-225ENST00000638041 JPH4Q96JJ6 628 aa11.85□□□□□ -0.51
MECP2-225ENST00000638041 CARMIL2Q6F5E8 1435 aa11.85□□□□□ -0.51
MECP2-225ENST00000638041 IGF1RP08069 1367 aa11.84□□□□□ -0.51
MECP2-225ENST00000638041 KIAA0586Q9BVV6 1533 aa11.81□□□□□ -0.52
MECP2-225ENST00000638041 ARAP1Q96P48 1450 aa11.81□□□□□ -0.52
MECP2-225ENST00000638041 EEA1Q15075 1411 aa11.8□□□□□ -0.52
MECP2-225ENST00000638041 CEP170Q5SW79 1584 aa11.79□□□□□ -0.52
MECP2-225ENST00000638041 PRG4Q92954 1404 aaPredicted RBP11.79□□□□□ -0.52
MECP2-225ENST00000638041 RAPGEF2Q9Y4G8 1499 aa11.79□□□□□ -0.52
MECP2-225ENST00000638041 SHROOM2Q13796 1616 aa11.75□□□□□ -0.53
MECP2-225ENST00000638041 RUSC2Q8N2Y8 1516 aa11.74□□□□□ -0.53
MECP2-225ENST00000638041 IQGAP2Q13576 1575 aa11.72□□□□□ -0.53
MECP2-225ENST00000638041 GOLGA3Q08378 1498 aa11.72□□□□□ -0.53
MECP2-225ENST00000638041 CSRNP3Q8WYN3 585 aa11.72□□□□□ -0.53
MECP2-225ENST00000638041 PTPRGP23470 1445 aa11.7□□□□□ -0.54
MECP2-225ENST00000638041 TNIKQ9UKE5 1360 aa11.7□□□□□ -0.54
MECP2-225ENST00000638041 SENP3Q9H4L4 574 aaPredicted RBP11.7□□□□□ -0.54
MECP2-225ENST00000638041 TTBK1Q5TCY1 1321 aaPredicted RBP11.65□□□□□ -0.54
MECP2-225ENST00000638041 CTTNBP2Q8WZ74 1663 aa11.64□□□□□ -0.55
MECP2-225ENST00000638041 UGGT2Q9NYU1 1516 aa11.62□□□□□ -0.55
MECP2-225ENST00000638041 PRXQ9BXM0 1461 aa11.61□□□□□ -0.55
MECP2-225ENST00000638041 ERCC6L2Q5T890 1561 aa11.6□□□□□ -0.55
MECP2-225ENST00000638041 UBTFP17480 764 aaKnown RBP11.6□□□□□ -0.55
MECP2-225ENST00000638041 UACAQ9BZF9 1416 aa11.59□□□□□ -0.55
MECP2-225ENST00000638041 FAM69CQ0P6D2 419 aa11.58□□□□□ -0.56
MECP2-225ENST00000638041 PLB1Q6P1J6 1458 aa11.57□□□□□ -0.56
MECP2-225ENST00000638041 MAPKBP1O60336 1514 aa11.57□□□□□ -0.56
MECP2-225ENST00000638041 UHRF1BP1LA0JNW5 1464 aa11.57□□□□□ -0.56
MECP2-225ENST00000638041 KIAA0556O60303 1618 aa11.56□□□□□ -0.56
MECP2-225ENST00000638041 ABCC2Q92887 1545 aa11.55□□□□□ -0.56
MECP2-225ENST00000638041 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.54□□□□□ -0.56
MECP2-225ENST00000638041 HNRNPUL2Q1KMD3 747 aaKnown RBP11.54□□□□□ -0.56
MECP2-225ENST00000638041 KIF21BO75037 1637 aa11.53□□□□□ -0.56
MECP2-225ENST00000638041 ABCC10Q5T3U5 1492 aa11.52□□□□□ -0.56
MECP2-225ENST00000638041 DISP1Q96F81 1524 aa11.52□□□□□ -0.57
MECP2-225ENST00000638041 ADCY10Q96PN6 1610 aa11.52□□□□□ -0.57
MECP2-225ENST00000638041 CDK11AQ9UQ88 783 aaPredicted RBP11.5□□□□□ -0.57
MECP2-225ENST00000638041 EFCAB5A4FU69 1503 aa11.5□□□□□ -0.57
MECP2-225ENST00000638041 TEX14Q8IWB6 1497 aa11.49□□□□□ -0.57
MECP2-225ENST00000638041 RANGAP1P46060 587 aaPredicted RBP11.48□□□□□ -0.57
MECP2-225ENST00000638041 KDM5BQ9UGL1 1544 aa11.47□□□□□ -0.57
MECP2-225ENST00000638041 ASXL2Q76L83 1435 aa11.47□□□□□ -0.57
MECP2-225ENST00000638041 P3H3Q8IVL6 736 aa11.47□□□□□ -0.57
MECP2-225ENST00000638041 FMN1Q68DA7 1419 aa11.45□□□□□ -0.58
MECP2-225ENST00000638041 PLEKHD1A6NEE1 506 aa11.45□□□□□ -0.58
MECP2-225ENST00000638041 DIP2BQ9P265 1576 aa11.44□□□□□ -0.58
MECP2-225ENST00000638041 WDR7Q9Y4E6 1490 aa11.44□□□□□ -0.58
MECP2-225ENST00000638041 GLI2P10070 1586 aa11.43□□□□□ -0.58
MECP2-225ENST00000638041 ATP1B4Q9UN42 357 aaPredicted RBP11.43□□□□□ -0.58
MECP2-225ENST00000638041 ZCCHC11Q5TAX3 1644 aaKnown RBP11.42□□□□□ -0.58
MECP2-225ENST00000638041 KIF13AQ9H1H9 1805 aa11.42□□□□□ -0.58
MECP2-225ENST00000638041 KCNH8Q96L42 1107 aa11.42□□□□□ -0.58
MECP2-225ENST00000638041 SAMD9Q5K651 1589 aa11.41□□□□□ -0.58
MECP2-225ENST00000638041 ABCA8O94911 1581 aa11.41□□□□□ -0.58
MECP2-225ENST00000638041 PHLDB1Q86UU1 1377 aa11.41□□□□□ -0.58
MECP2-225ENST00000638041 RAPGEF6Q8TEU7 1601 aa11.4□□□□□ -0.58
MECP2-225ENST00000638041 EHMT2Q96KQ7 1210 aa11.4□□□□□ -0.58
MECP2-225ENST00000638041 EPRSP07814 1512 aaKnown RBP11.39□□□□□ -0.59
MECP2-225ENST00000638041 KDM6BO15054 1643 aa11.38□□□□□ -0.59
MECP2-225ENST00000638041 CD109Q6YHK3 1445 aa11.37□□□□□ -0.59
MECP2-225ENST00000638041 TSPOAP1O95153 1857 aa11.37□□□□□ -0.59
MECP2-225ENST00000638041 CFAP43Q8NDM7 1665 aa11.36□□□□□ -0.59
MECP2-225ENST00000638041 CLIP1P30622 1438 aa11.35□□□□□ -0.59
MECP2-225ENST00000638041 FHOD3Q2V2M9 1422 aa11.35□□□□□ -0.59
MECP2-225ENST00000638041 HECW1Q76N89 1606 aa11.35□□□□□ -0.59
MECP2-225ENST00000638041 ATP10BO94823 1461 aa11.33□□□□□ -0.6
MECP2-225ENST00000638041 ARID3CA6NKF2 412 aa11.33□□□□□ -0.6
MECP2-225ENST00000638041 MAGI3Q5TCQ9 1506 aa11.32□□□□□ -0.6
MECP2-225ENST00000638041 MAP3K4Q9Y6R4 1608 aa11.31□□□□□ -0.6
MECP2-225ENST00000638041 CFAP74Q9C0B2 1584 aa11.31□□□□□ -0.6
MECP2-225ENST00000638041 CCDC18Q5T9S5 1454 aa11.31□□□□□ -0.6
MECP2-225ENST00000638041 NEO1Q92859 1461 aa11.28□□□□□ -0.6
MECP2-225ENST00000638041 NUP153P49790 1475 aaKnown RBP11.27□□□□□ -0.6
MECP2-225ENST00000638041 APLP2Q06481 763 aa11.27□□□□□ -0.61
MECP2-225ENST00000638041 ARHGAP35Q9NRY4 1499 aa11.26□□□□□ -0.61
MECP2-225ENST00000638041 ABCA9Q8IUA7 1624 aa11.25□□□□□ -0.61
MECP2-225ENST00000638041 EFCAB2Q5VUJ9 269 aa11.25□□□□□ -0.61
MECP2-225ENST00000638041 MYT1LQ9UL68 1186 aa11.24□□□□□ -0.61
MECP2-225ENST00000638041 CASKIN1Q8WXD9 1431 aa11.24□□□□□ -0.61
MECP2-225ENST00000638041 FYCO1Q9BQS8 1478 aa11.23□□□□□ -0.61
MECP2-225ENST00000638041 KIF14Q15058 1648 aa11.23□□□□□ -0.61
MECP2-225ENST00000638041 ARAP3Q8WWN8 1544 aa11.22□□□□□ -0.61
MECP2-225ENST00000638041 FANCAO15360 1455 aa11.2□□□□□ -0.62
MECP2-225ENST00000638041 TROQ12816 1431 aaPredicted RBP11.2□□□□□ -0.62
MECP2-225ENST00000638041 DENND4BO75064 1496 aaPredicted RBP11.19□□□□□ -0.62
MECP2-225ENST00000638041 MTUS2Q5JR59 1369 aa11.19□□□□□ -0.62
MECP2-225ENST00000638041 ARID4BQ4LE39 1312 aaPredicted RBP11.19□□□□□ -0.62
MECP2-225ENST00000638041 PPRC1Q5VV67 1664 aaKnown RBP11.19□□□□□ -0.62
MECP2-225ENST00000638041 POGZQ7Z3K3 1410 aa11.18□□□□□ -0.62
MECP2-225ENST00000638041 PLCH2O75038 1416 aa11.18□□□□□ -0.62
MECP2-225ENST00000638041 AKNAQ7Z591 1439 aa11.18□□□□□ -0.62
MECP2-225ENST00000638041 CDK13Q14004 1512 aaKnown RBP11.17□□□□□ -0.62
MECP2-225ENST00000638041 MYO5CQ9NQX4 1742 aa11.17□□□□□ -0.62
MECP2-225ENST00000638041 CEP162Q5TB80 1403 aa11.17□□□□□ -0.62
MECP2-225ENST00000638041 ESF1Q9H501 851 aaKnown RBP11.16□□□□□ -0.62
MECP2-225ENST00000638041 MAGI2Q86UL8 1455 aa11.16□□□□□ -0.62
MECP2-225ENST00000638041 ARHGAP5Q13017 1502 aa11.15□□□□□ -0.62
MECP2-225ENST00000638041 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.15□□□□□ -0.62
MECP2-225ENST00000638041 ADGRL1O94910 1474 aa11.14□□□□□ -0.63
MECP2-225ENST00000638041 CCNB3Q8WWL7 1395 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms