RNA–Protein interactions for RNA: ENST00000637844.1

CACNA1D-227, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 3

Gene CACNA1D, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-227ENST00000637844 ARAP1Q96P48 1450 aa9.76□□□□□ -0.85
CACNA1D-227ENST00000637844 ZNF608Q9ULD9 1512 aaPredicted RBP9.76□□□□□ -0.85
CACNA1D-227ENST00000637844 ARHGAP35Q9NRY4 1499 aa9.75□□□□□ -0.85
CACNA1D-227ENST00000637844 MAGI1Q96QZ7 1491 aaPredicted RBP9.74□□□□□ -0.85
CACNA1D-227ENST00000637844 SNAPC4Q5SXM2 1469 aa9.72□□□□□ -0.85
CACNA1D-227ENST00000637844 IQGAP2Q13576 1575 aa9.71□□□□□ -0.86
CACNA1D-227ENST00000637844 PPARGC1BQ86YN6 1023 aaKnown RBP9.7□□□□□ -0.86
CACNA1D-227ENST00000637844 SAMD9Q5K651 1589 aa9.7□□□□□ -0.86
CACNA1D-227ENST00000637844 SYNJ2O15056 1496 aa9.69□□□□□ -0.86
CACNA1D-227ENST00000637844 GRIN2AQ12879 1464 aa9.68□□□□□ -0.86
CACNA1D-227ENST00000637844 FMN1Q68DA7 1419 aa9.67□□□□□ -0.86
CACNA1D-227ENST00000637844 CHMP7Q8WUX9 453 aaPredicted RBP9.66□□□□□ -0.86
CACNA1D-227ENST00000637844 MAP3K1Q13233 1512 aa9.66□□□□□ -0.86
CACNA1D-227ENST00000637844 FYCO1Q9BQS8 1478 aa9.66□□□□□ -0.86
CACNA1D-227ENST00000637844 CFAP43Q8NDM7 1665 aa9.65□□□□□ -0.86
CACNA1D-227ENST00000637844 TTBK1Q5TCY1 1321 aaPredicted RBP9.65□□□□□ -0.86
CACNA1D-227ENST00000637844 PCF11O94913 1555 aaKnown RBP9.65□□□□□ -0.86
CACNA1D-227ENST00000637844 KIAA0586Q9BVV6 1533 aa9.65□□□□□ -0.86
CACNA1D-227ENST00000637844 FHOD3Q2V2M9 1422 aa9.65□□□□□ -0.87
CACNA1D-227ENST00000637844 TIAM1Q13009 1591 aa9.64□□□□□ -0.87
CACNA1D-227ENST00000637844 P3H3Q8IVL6 736 aa9.64□□□□□ -0.87
CACNA1D-227ENST00000637844 UGGT2Q9NYU1 1516 aa9.63□□□□□ -0.87
CACNA1D-227ENST00000637844 CASKIN1Q8WXD9 1431 aa9.63□□□□□ -0.87
CACNA1D-227ENST00000637844 FBLN2P98095 1184 aa9.62□□□□□ -0.87
CACNA1D-227ENST00000637844 CEP170Q5SW79 1584 aa9.61□□□□□ -0.87
CACNA1D-227ENST00000637844 ATP1B4Q9UN42 357 aaPredicted RBP9.6□□□□□ -0.87
CACNA1D-227ENST00000637844 KIAA0556O60303 1618 aa9.6□□□□□ -0.87
CACNA1D-227ENST00000637844 HECW1Q76N89 1606 aa9.6□□□□□ -0.87
CACNA1D-227ENST00000637844 CHD1O14646 1710 aa9.59□□□□□ -0.87
CACNA1D-227ENST00000637844 NUP160Q12769 1436 aa9.58□□□□□ -0.88
CACNA1D-227ENST00000637844 CCDC18Q5T9S5 1454 aa9.58□□□□□ -0.88
CACNA1D-227ENST00000637844 LRRC9Q6ZRR7 1453 aa9.58□□□□□ -0.88
CACNA1D-227ENST00000637844 CARMIL2Q6F5E8 1435 aa9.57□□□□□ -0.88
CACNA1D-227ENST00000637844 HRCP23327 699 aa9.55□□□□□ -0.88
CACNA1D-227ENST00000637844 KANK4Q5T7N3 995 aaPredicted RBP9.54□□□□□ -0.88
CACNA1D-227ENST00000637844 DISP1Q96F81 1524 aa9.54□□□□□ -0.88
CACNA1D-227ENST00000637844 LRRIQ1Q96JM4 1722 aa9.53□□□□□ -0.88
CACNA1D-227ENST00000637844 ZEB1P37275 1124 aaPredicted RBP9.53□□□□□ -0.88
CACNA1D-227ENST00000637844 RAPGEF6Q8TEU7 1601 aa9.53□□□□□ -0.88
CACNA1D-227ENST00000637844 MTUS2Q5JR59 1369 aa9.52□□□□□ -0.88
CACNA1D-227ENST00000637844 EHBP1L1Q8N3D4 1523 aa9.52□□□□□ -0.88
CACNA1D-227ENST00000637844 SUPT6HQ7KZ85 1726 aaKnown RBP9.52□□□□□ -0.89
CACNA1D-227ENST00000637844 JPH4Q96JJ6 628 aa9.51□□□□□ -0.89
CACNA1D-227ENST00000637844 RRBP1Q9P2E9 1410 aaKnown RBP9.5□□□□□ -0.89
CACNA1D-227ENST00000637844 CCNB3Q8WWL7 1395 aa9.5□□□□□ -0.89
CACNA1D-227ENST00000637844 EPRSP07814 1512 aaKnown RBP9.49□□□□□ -0.89
CACNA1D-227ENST00000637844 SHROOM2Q13796 1616 aa9.49□□□□□ -0.89
CACNA1D-227ENST00000637844 HNRNPUL2Q1KMD3 747 aaKnown RBP9.47□□□□□ -0.89
CACNA1D-227ENST00000637844 PRG4Q92954 1404 aaPredicted RBP9.47□□□□□ -0.89
CACNA1D-227ENST00000637844 CCER1Q8TC90 406 aaPredicted RBP9.46□□□□□ -0.9
CACNA1D-227ENST00000637844 CDK11AQ9UQ88 783 aaPredicted RBP9.46□□□□□ -0.9
CACNA1D-227ENST00000637844 CDK13Q14004 1512 aaKnown RBP9.45□□□□□ -0.9
CACNA1D-227ENST00000637844 CLASP1Q7Z460 1538 aa9.45□□□□□ -0.9
CACNA1D-227ENST00000637844 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.44□□□□□ -0.9
CACNA1D-227ENST00000637844 NUP153P49790 1475 aaKnown RBP9.44□□□□□ -0.9
CACNA1D-227ENST00000637844 NCOA2Q15596 1464 aa9.44□□□□□ -0.9
CACNA1D-227ENST00000637844 ABCA8O94911 1581 aa9.43□□□□□ -0.9
CACNA1D-227ENST00000637844 PHLDB1Q86UU1 1377 aa9.43□□□□□ -0.9
CACNA1D-227ENST00000637844 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.43□□□□□ -0.9
CACNA1D-227ENST00000637844 PLB1Q6P1J6 1458 aa9.42□□□□□ -0.9
CACNA1D-227ENST00000637844 PTPRGP23470 1445 aa9.42□□□□□ -0.9
CACNA1D-227ENST00000637844 FAM50AQ14320 339 aaKnown RBP9.42□□□□□ -0.9
CACNA1D-227ENST00000637844 MYOM3Q5VTT5 1437 aa9.41□□□□□ -0.9
CACNA1D-227ENST00000637844 FGD6Q6ZV73 1430 aa9.41□□□□□ -0.9
CACNA1D-227ENST00000637844 ITSN2Q9NZM3 1697 aa9.41□□□□□ -0.9
CACNA1D-227ENST00000637844 ARHGEF11O15085 1522 aa9.41□□□□□ -0.9
CACNA1D-227ENST00000637844 MAGI3Q5TCQ9 1506 aa9.41□□□□□ -0.9
CACNA1D-227ENST00000637844 ADCY10Q96PN6 1610 aa9.4□□□□□ -0.9
CACNA1D-227ENST00000637844 PTPN23Q9H3S7 1636 aa9.4□□□□□ -0.9
CACNA1D-227ENST00000637844 TROQ12816 1431 aaPredicted RBP9.39□□□□□ -0.91
CACNA1D-227ENST00000637844 ARID3CA6NKF2 412 aa9.38□□□□□ -0.91
CACNA1D-227ENST00000637844 ITGAEP38570 1179 aa9.38□□□□□ -0.91
CACNA1D-227ENST00000637844 MIA2Q96PC5 1412 aa9.38□□□□□ -0.91
CACNA1D-227ENST00000637844 UACAQ9BZF9 1416 aa9.38□□□□□ -0.91
CACNA1D-227ENST00000637844 KIF14Q15058 1648 aa9.38□□□□□ -0.91
CACNA1D-227ENST00000637844 PLEKHD1A6NEE1 506 aa9.36□□□□□ -0.91
CACNA1D-227ENST00000637844 ABCC2Q92887 1545 aa9.36□□□□□ -0.91
CACNA1D-227ENST00000637844 TCOF1Q13428 1488 aaKnown RBP9.35□□□□□ -0.91
CACNA1D-227ENST00000637844 ATP10BO94823 1461 aa9.34□□□□□ -0.91
CACNA1D-227ENST00000637844 ERCC6L2Q5T890 1561 aa9.34□□□□□ -0.91
CACNA1D-227ENST00000637844 SETD5Q9C0A6 1442 aa9.33□□□□□ -0.92
CACNA1D-227ENST00000637844 OSCARQ8IYS5 282 aa9.33□□□□□ -0.92
CACNA1D-227ENST00000637844 UHRF1BP1LA0JNW5 1464 aa9.33□□□□□ -0.92
CACNA1D-227ENST00000637844 CLSPNQ9HAW4 1339 aa9.31□□□□□ -0.92
CACNA1D-227ENST00000637844 CDC42BPAQ5VT25 1732 aa9.31□□□□□ -0.92
CACNA1D-227ENST00000637844 ZCCHC11Q5TAX3 1644 aaKnown RBP9.31□□□□□ -0.92
CACNA1D-227ENST00000637844 GCC2Q8IWJ2 1684 aa9.3□□□□□ -0.92
CACNA1D-227ENST00000637844 RAB3GAP2Q9H2M9 1393 aa9.3□□□□□ -0.92
CACNA1D-227ENST00000637844 DNMT1P26358 1616 aaKnown RBP9.3□□□□□ -0.92
CACNA1D-227ENST00000637844 ADGBQ8N7X0 1667 aa9.29□□□□□ -0.92
CACNA1D-227ENST00000637844 ACIN1Q9UKV3 1341 aaKnown RBP9.29□□□□□ -0.92
CACNA1D-227ENST00000637844 GPATCH8Q9UKJ3 1502 aaKnown RBP9.28□□□□□ -0.92
CACNA1D-227ENST00000637844 CFDP1Q9UEE9 299 aaPredicted RBP9.28□□□□□ -0.92
CACNA1D-227ENST00000637844 AKNAQ7Z591 1439 aa9.28□□□□□ -0.92
CACNA1D-227ENST00000637844 MYO5CQ9NQX4 1742 aa9.28□□□□□ -0.92
CACNA1D-227ENST00000637844 CAMSAP2Q08AD1 1489 aa9.28□□□□□ -0.92
CACNA1D-227ENST00000637844 PREX2Q70Z35 1606 aa9.27□□□□□ -0.92
CACNA1D-227ENST00000637844 DHX57Q6P158 1386 aaKnown RBP9.27□□□□□ -0.93
CACNA1D-227ENST00000637844 HFM1A2PYH4 1435 aa9.27□□□□□ -0.93
CACNA1D-227ENST00000637844 ABCC10Q5T3U5 1492 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms