RNA–Protein interactions for RNA: ENST00000637774.1

CACNA1A-248, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,381 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-248ENST00000637774 CHMP7Q8WUX9 453 aaPredicted RBP14.25□□□□□ -0.13
CACNA1A-248ENST00000637774 LAMC3Q9Y6N6 1575 aa14.23□□□□□ -0.13
CACNA1A-248ENST00000637774 NEUROD1Q13562 356 aa14.22□□□□□ -0.13
CACNA1A-248ENST00000637774 ABCA10Q8WWZ4 1543 aa14.21□□□□□ -0.13
CACNA1A-248ENST00000637774 MTUS2Q5JR59 1369 aa14.2□□□□□ -0.14
CACNA1A-248ENST00000637774 CCNB3Q8WWL7 1395 aa14.2□□□□□ -0.14
CACNA1A-248ENST00000637774 FHAD1B1AJZ9 1412 aa14.18□□□□□ -0.14
CACNA1A-248ENST00000637774 YTHDC1Q96MU7 727 aaKnown RBP14.17□□□□□ -0.14
CACNA1A-248ENST00000637774 CHIC2Q9UKJ5 165 aa14.16□□□□□ -0.14
CACNA1A-248ENST00000637774 ZNF316A6NFI3 1004 aaPredicted RBP14.16□□□□□ -0.14
CACNA1A-248ENST00000637774 PRDM2Q13029 1718 aa14.13□□□□□ -0.15
CACNA1A-248ENST00000637774 MRC2Q9UBG0 1479 aa14.1□□□□□ -0.15
CACNA1A-248ENST00000637774 PHLDB1Q86UU1 1377 aa14.1□□□□□ -0.15
CACNA1A-248ENST00000637774 KIF21AQ7Z4S6 1674 aa14.1□□□□□ -0.15
CACNA1A-248ENST00000637774 ZNF608Q9ULD9 1512 aaPredicted RBP14.09□□□□□ -0.15
CACNA1A-248ENST00000637774 TRIM52Q96A61 297 aa14.08□□□□□ -0.15
CACNA1A-248ENST00000637774 ZNF777Q9ULD5 760 aaPredicted RBP14.08□□□□□ -0.15
CACNA1A-248ENST00000637774 FMN1Q68DA7 1419 aa14.07□□□□□ -0.16
CACNA1A-248ENST00000637774 RRP7BPQ9NSQ0 103 aa14.07□□□□□ -0.16
CACNA1A-248ENST00000637774 SIN3AQ96ST3 1273 aa14.06□□□□□ -0.16
CACNA1A-248ENST00000637774 LRRC9Q6ZRR7 1453 aa14.05□□□□□ -0.16
CACNA1A-248ENST00000637774 RAB3GAP2Q9H2M9 1393 aa14.04□□□□□ -0.16
CACNA1A-248ENST00000637774 DHX57Q6P158 1386 aaKnown RBP14.02□□□□□ -0.17
CACNA1A-248ENST00000637774 GRIN2BQ13224 1484 aa14.02□□□□□ -0.17
CACNA1A-248ENST00000637774 PCF11O94913 1555 aaKnown RBP13.99□□□□□ -0.17
CACNA1A-248ENST00000637774 RRBP1Q9P2E9 1410 aaKnown RBP13.99□□□□□ -0.17
CACNA1A-248ENST00000637774 CDK11AQ9UQ88 783 aaPredicted RBP13.99□□□□□ -0.17
CACNA1A-248ENST00000637774 TIAM1Q13009 1591 aa13.99□□□□□ -0.17
CACNA1A-248ENST00000637774 HIRIP3Q9BW71 556 aaPredicted RBP13.99□□□□□ -0.17
CACNA1A-248ENST00000637774 CASKIN1Q8WXD9 1431 aa13.99□□□□□ -0.17
CACNA1A-248ENST00000637774 JPH4Q96JJ6 628 aa13.99□□□□□ -0.17
CACNA1A-248ENST00000637774 CUL7Q14999 1698 aa13.97□□□□□ -0.17
CACNA1A-248ENST00000637774 SNAPC4Q5SXM2 1469 aa13.97□□□□□ -0.17
CACNA1A-248ENST00000637774 IFT140Q96RY7 1462 aa13.97□□□□□ -0.17
CACNA1A-248ENST00000637774 SETD5Q9C0A6 1442 aa13.96□□□□□ -0.17
CACNA1A-248ENST00000637774 MIER1Q8N108 512 aa13.95□□□□□ -0.18
CACNA1A-248ENST00000637774 CENPBP07199 599 aaPredicted RBP13.93□□□□□ -0.18
CACNA1A-248ENST00000637774 FYCO1Q9BQS8 1478 aa13.93□□□□□ -0.18
CACNA1A-248ENST00000637774 EFCAB5A4FU69 1503 aa13.93□□□□□ -0.18
CACNA1A-248ENST00000637774 ABCA5Q8WWZ7 1642 aa13.91□□□□□ -0.18
CACNA1A-248ENST00000637774 MYT1Q01538 1121 aa13.9□□□□□ -0.18
CACNA1A-248ENST00000637774 TARBP1Q13395 1621 aaKnown RBP13.9□□□□□ -0.18
CACNA1A-248ENST00000637774 CFDP1Q9UEE9 299 aaPredicted RBP13.89□□□□□ -0.19
CACNA1A-248ENST00000637774 ZNF644Q9H582 1327 aaPredicted RBP13.89□□□□□ -0.19
CACNA1A-248ENST00000637774 PLEKHD1A6NEE1 506 aa13.89□□□□□ -0.19
CACNA1A-248ENST00000637774 FGD6Q6ZV73 1430 aa13.89□□□□□ -0.19
CACNA1A-248ENST00000637774 CLSPNQ9HAW4 1339 aa13.88□□□□□ -0.19
CACNA1A-248ENST00000637774 FOXD1Q16676 465 aa13.88□□□□□ -0.19
CACNA1A-248ENST00000637774 NCOA2Q15596 1464 aa13.87□□□□□ -0.19
CACNA1A-248ENST00000637774 KCNH8Q96L42 1107 aa13.87□□□□□ -0.19
CACNA1A-248ENST00000637774 CDK13Q14004 1512 aaKnown RBP13.86□□□□□ -0.19
CACNA1A-248ENST00000637774 IQGAP2Q13576 1575 aa13.86□□□□□ -0.19
CACNA1A-248ENST00000637774 TONSLQ96HA7 1378 aa13.85□□□□□ -0.19
CACNA1A-248ENST00000637774 CTTNBP2Q8WZ74 1663 aa13.84□□□□□ -0.19
CACNA1A-248ENST00000637774 DDX10Q13206 875 aaKnown RBP13.83□□□□□ -0.19
CACNA1A-248ENST00000637774 GRIN2AQ12879 1464 aa13.83□□□□□ -0.2
CACNA1A-248ENST00000637774 CARMIL2Q6F5E8 1435 aa13.83□□□□□ -0.2
CACNA1A-248ENST00000637774 MYOM3Q5VTT5 1437 aa13.82□□□□□ -0.2
CACNA1A-248ENST00000637774 ZNF326Q5BKZ1 582 aaKnown RBP13.82□□□□□ -0.2
CACNA1A-248ENST00000637774 KIAA0586Q9BVV6 1533 aa13.82□□□□□ -0.2
CACNA1A-248ENST00000637774 CNGB1Q14028 1251 aaPredicted RBP13.82□□□□□ -0.2
CACNA1A-248ENST00000637774 MAP3K1Q13233 1512 aa13.82□□□□□ -0.2
CACNA1A-248ENST00000637774 MYT1LQ9UL68 1186 aa13.82□□□□□ -0.2
CACNA1A-248ENST00000637774 WDR62O43379 1518 aa13.81□□□□□ -0.2
CACNA1A-248ENST00000637774 WDR97A6NE52 1622 aa13.81□□□□□ -0.2
CACNA1A-248ENST00000637774 ADAMTS12P58397 1594 aa13.8□□□□□ -0.2
CACNA1A-248ENST00000637774 EPRSP07814 1512 aaKnown RBP13.79□□□□□ -0.2
CACNA1A-248ENST00000637774 SLC4A1APQ9BWU0 796 aaKnown RBP13.79□□□□□ -0.2
CACNA1A-248ENST00000637774 POLR3GLQ9BT43 218 aa13.79□□□□□ -0.2
CACNA1A-248ENST00000637774 PBRM1Q86U86 1689 aa13.78□□□□□ -0.2
CACNA1A-248ENST00000637774 ACIN1Q9UKV3 1341 aaKnown RBP13.78□□□□□ -0.2
CACNA1A-248ENST00000637774 PLB1Q6P1J6 1458 aa13.78□□□□□ -0.2
CACNA1A-248ENST00000637774 EIF4G3O43432 1585 aaKnown RBP13.78□□□□□ -0.2
CACNA1A-248ENST00000637774 PRG4Q92954 1404 aaPredicted RBP13.77□□□□□ -0.2
CACNA1A-248ENST00000637774 SYNJ2O15056 1496 aa13.76□□□□□ -0.21
CACNA1A-248ENST00000637774 PTPRKQ15262 1439 aa13.76□□□□□ -0.21
CACNA1A-248ENST00000637774 CCDC18Q5T9S5 1454 aa13.76□□□□□ -0.21
CACNA1A-248ENST00000637774 TSPY4P0CV99 314 aa13.75□□□□□ -0.21
CACNA1A-248ENST00000637774 TSPY10P0CW01 314 aa13.75□□□□□ -0.21
CACNA1A-248ENST00000637774 SCAF1Q9H7N4 1312 aaKnown RBP13.75□□□□□ -0.21
CACNA1A-248ENST00000637774 GTF3C3Q9Y5Q9 886 aa13.75□□□□□ -0.21
CACNA1A-248ENST00000637774 PTPRGP23470 1445 aa13.74□□□□□ -0.21
CACNA1A-248ENST00000637774 MAGI1Q96QZ7 1491 aaPredicted RBP13.73□□□□□ -0.21
CACNA1A-248ENST00000637774 HNRNPMP52272 730 aaKnown RBP eCLIP13.73□□□□□ -0.21
CACNA1A-248ENST00000637774 MPHOSPH9Q99550 1183 aa13.73□□□□□ -0.21
CACNA1A-248ENST00000637774 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.73□□□□□ -0.21
CACNA1A-248ENST00000637774 SAMD9Q5K651 1589 aa13.72□□□□□ -0.21
CACNA1A-248ENST00000637774 EHBP1L1Q8N3D4 1523 aa13.71□□□□□ -0.21
CACNA1A-248ENST00000637774 PPP1R15AO75807 674 aaPredicted RBP13.71□□□□□ -0.21
CACNA1A-248ENST00000637774 THOC2Q8NI27 1593 aaKnown RBP13.71□□□□□ -0.21
CACNA1A-248ENST00000637774 CFAP43Q8NDM7 1665 aa13.71□□□□□ -0.22
CACNA1A-248ENST00000637774 HECW1Q76N89 1606 aa13.7□□□□□ -0.22
CACNA1A-248ENST00000637774 DISP1Q96F81 1524 aa13.7□□□□□ -0.22
CACNA1A-248ENST00000637774 MAGI3Q5TCQ9 1506 aa13.7□□□□□ -0.22
CACNA1A-248ENST00000637774 NAIPQ13075 1403 aa13.68□□□□□ -0.22
CACNA1A-248ENST00000637774 SUPT6HQ7KZ85 1726 aaKnown RBP13.68□□□□□ -0.22
CACNA1A-248ENST00000637774 NUP153P49790 1475 aaKnown RBP13.67□□□□□ -0.22
CACNA1A-248ENST00000637774 UGGT2Q9NYU1 1516 aa13.67□□□□□ -0.22
CACNA1A-248ENST00000637774 HFM1A2PYH4 1435 aa13.66□□□□□ -0.22
CACNA1A-248ENST00000637774 KDM2AQ9Y2K7 1162 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms