RNA–Protein interactions for RNA: ENST00000637721.1

SYNGAP1-224, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 190 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-224ENST00000637721 JPH4Q96JJ6 628 aa22.8■■□□□ 1.24
SYNGAP1-224ENST00000637721 PRG4Q92954 1404 aaPredicted RBP22.79■■□□□ 1.24
SYNGAP1-224ENST00000637721 KIAA0586Q9BVV6 1533 aa22.73■■□□□ 1.23
SYNGAP1-224ENST00000637721 CARMIL1Q5VZK9 1371 aa22.68■■□□□ 1.22
SYNGAP1-224ENST00000637721 NPM1P06748 294 aaKnown RBP eCLIP22.56■■□□□ 1.2
SYNGAP1-224ENST00000637721 CARMIL2Q6F5E8 1435 aa22.53■■□□□ 1.2
SYNGAP1-224ENST00000637721 IQGAP2Q13576 1575 aa22.53■■□□□ 1.2
SYNGAP1-224ENST00000637721 MAPKBP1O60336 1514 aa22.52■■□□□ 1.2
SYNGAP1-224ENST00000637721 ADCY10Q96PN6 1610 aa22.51■■□□□ 1.19
SYNGAP1-224ENST00000637721 KIF13AQ9H1H9 1805 aa22.51■■□□□ 1.19
SYNGAP1-224ENST00000637721 RAPGEF2Q9Y4G8 1499 aa22.51■■□□□ 1.19
SYNGAP1-224ENST00000637721 PTPRGP23470 1445 aa22.48■■□□□ 1.19
SYNGAP1-224ENST00000637721 TNIKQ9UKE5 1360 aa22.47■■□□□ 1.19
SYNGAP1-224ENST00000637721 ABCC10Q5T3U5 1492 aa22.47■■□□□ 1.19
SYNGAP1-224ENST00000637721 UGGT2Q9NYU1 1516 aa22.4■■□□□ 1.18
SYNGAP1-224ENST00000637721 DIP2BQ9P265 1576 aa22.39■■□□□ 1.18
SYNGAP1-224ENST00000637721 FAM69CQ0P6D2 419 aa22.39■■□□□ 1.17
SYNGAP1-224ENST00000637721 DISP1Q96F81 1524 aa22.37■■□□□ 1.17
SYNGAP1-224ENST00000637721 UHRF1BP1LA0JNW5 1464 aa22.36■■□□□ 1.17
SYNGAP1-224ENST00000637721 ABCC2Q92887 1545 aa22.36■■□□□ 1.17
SYNGAP1-224ENST00000637721 CTTNBP2Q8WZ74 1663 aa22.33■■□□□ 1.17
SYNGAP1-224ENST00000637721 UACAQ9BZF9 1416 aa22.32■■□□□ 1.16
SYNGAP1-224ENST00000637721 KIAA0556O60303 1618 aa22.31■■□□□ 1.16
SYNGAP1-224ENST00000637721 PRXQ9BXM0 1461 aa22.31■■□□□ 1.16
SYNGAP1-224ENST00000637721 TTBK1Q5TCY1 1321 aaPredicted RBP22.3■■□□□ 1.16
SYNGAP1-224ENST00000637721 PLB1Q6P1J6 1458 aa22.28■■□□□ 1.16
SYNGAP1-224ENST00000637721 GOLGA3Q08378 1498 aa22.27■■□□□ 1.16
SYNGAP1-224ENST00000637721 KDM5BQ9UGL1 1544 aa22.23■■□□□ 1.15
SYNGAP1-224ENST00000637721 ASXL2Q76L83 1435 aa22.23■■□□□ 1.15
SYNGAP1-224ENST00000637721 GLI2P10070 1586 aa22.22■■□□□ 1.15
SYNGAP1-224ENST00000637721 AEBP2Q6ZN18 517 aaPredicted RBP22.2■■□□□ 1.14
SYNGAP1-224ENST00000637721 TSPOAP1O95153 1857 aa22.19■■□□□ 1.14
SYNGAP1-224ENST00000637721 EEA1Q15075 1411 aa22.17■■□□□ 1.14
SYNGAP1-224ENST00000637721 KDM6BO15054 1643 aa22.17■■□□□ 1.14
SYNGAP1-224ENST00000637721 ZCCHC11Q5TAX3 1644 aaKnown RBP22.16■■□□□ 1.14
SYNGAP1-224ENST00000637721 CSRNP3Q8WYN3 585 aa22.15■■□□□ 1.14
SYNGAP1-224ENST00000637721 FAM9AQ8IZU1 332 aaPredicted RBP22.13■■□□□ 1.13
SYNGAP1-224ENST00000637721 EPRSP07814 1512 aaKnown RBP22.11■■□□□ 1.13
SYNGAP1-224ENST00000637721 ABCA8O94911 1581 aa22.1■■□□□ 1.13
SYNGAP1-224ENST00000637721 PPRC1Q5VV67 1664 aaKnown RBP22.07■■□□□ 1.12
SYNGAP1-224ENST00000637721 WDR7Q9Y4E6 1490 aa22.07■■□□□ 1.12
SYNGAP1-224ENST00000637721 MAP3K4Q9Y6R4 1608 aa22.06■■□□□ 1.12
SYNGAP1-224ENST00000637721 TEX14Q8IWB6 1497 aa22.05■■□□□ 1.12
SYNGAP1-224ENST00000637721 SAMD9Q5K651 1589 aa22.02■■□□□ 1.12
SYNGAP1-224ENST00000637721 CFAP43Q8NDM7 1665 aa21.97■■□□□ 1.11
SYNGAP1-224ENST00000637721 KIF21BO75037 1637 aa21.94■■□□□ 1.1
SYNGAP1-224ENST00000637721 MAGI3Q5TCQ9 1506 aa21.92■■□□□ 1.1
SYNGAP1-224ENST00000637721 P3H3Q8IVL6 736 aa21.92■■□□□ 1.1
SYNGAP1-224ENST00000637721 CD109Q6YHK3 1445 aa21.9■■□□□ 1.1
SYNGAP1-224ENST00000637721 ATP10BO94823 1461 aa21.9■■□□□ 1.1
SYNGAP1-224ENST00000637721 RAPGEF6Q8TEU7 1601 aa21.89■■□□□ 1.09
SYNGAP1-224ENST00000637721 KCNH8Q96L42 1107 aa21.89■■□□□ 1.09
SYNGAP1-224ENST00000637721 COL17A1Q9UMD9 1497 aaPredicted RBP21.87■■□□□ 1.09
SYNGAP1-224ENST00000637721 EFCAB5A4FU69 1503 aa21.86■■□□□ 1.09
SYNGAP1-224ENST00000637721 KDM4FA0A1W2PPD8 638 aa21.81■■□□□ 1.08
SYNGAP1-224ENST00000637721 CHIC1Q5VXU3 224 aa21.81■■□□□ 1.08
SYNGAP1-224ENST00000637721 FHOD3Q2V2M9 1422 aa21.8■■□□□ 1.08
SYNGAP1-224ENST00000637721 ABCA9Q8IUA7 1624 aa21.8■■□□□ 1.08
SYNGAP1-224ENST00000637721 NUP153P49790 1475 aaKnown RBP21.78■■□□□ 1.08
SYNGAP1-224ENST00000637721 PHLDB1Q86UU1 1377 aa21.78■■□□□ 1.08
SYNGAP1-224ENST00000637721 ARID3CA6NKF2 412 aa21.78■■□□□ 1.08
SYNGAP1-224ENST00000637721 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.76■■□□□ 1.07
SYNGAP1-224ENST00000637721 RANGAP1P46060 587 aaPredicted RBP21.76■■□□□ 1.07
SYNGAP1-224ENST00000637721 HNRNPUL2Q1KMD3 747 aaKnown RBP21.76■■□□□ 1.07
SYNGAP1-224ENST00000637721 ARAP3Q8WWN8 1544 aa21.74■■□□□ 1.07
SYNGAP1-224ENST00000637721 ADGRL1O94910 1474 aa21.71■■□□□ 1.07
SYNGAP1-224ENST00000637721 UBTFP17480 764 aaKnown RBP21.71■■□□□ 1.07
SYNGAP1-224ENST00000637721 PLEKHD1A6NEE1 506 aa21.7■■□□□ 1.06
SYNGAP1-224ENST00000637721 NEO1Q92859 1461 aa21.7■■□□□ 1.06
SYNGAP1-224ENST00000637721 FMN1Q68DA7 1419 aa21.66■■□□□ 1.06
SYNGAP1-224ENST00000637721 ARHGAP35Q9NRY4 1499 aa21.61■■□□□ 1.05
SYNGAP1-224ENST00000637721 HECW1Q76N89 1606 aa21.6■■□□□ 1.05
SYNGAP1-224ENST00000637721 CFAP74Q9C0B2 1584 aa21.6■■□□□ 1.05
SYNGAP1-224ENST00000637721 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.57■■□□□ 1.04
SYNGAP1-224ENST00000637721 EHMT2Q96KQ7 1210 aa21.55■■□□□ 1.04
SYNGAP1-224ENST00000637721 CDK11AQ9UQ88 783 aaPredicted RBP21.55■■□□□ 1.04
SYNGAP1-224ENST00000637721 CDK13Q14004 1512 aaKnown RBP21.55■■□□□ 1.04
SYNGAP1-224ENST00000637721 FANCAO15360 1455 aa21.52■■□□□ 1.04
SYNGAP1-224ENST00000637721 RAPGEF3O95398 923 aa21.52■■□□□ 1.04
SYNGAP1-224ENST00000637721 AKNAQ7Z591 1439 aa21.52■■□□□ 1.04
SYNGAP1-224ENST00000637721 TTC37Q6PGP7 1564 aa21.52■■□□□ 1.04
SYNGAP1-224ENST00000637721 DENND4BO75064 1496 aaPredicted RBP21.51■■□□□ 1.03
SYNGAP1-224ENST00000637721 FRMPD1Q5SYB0 1578 aa21.5■■□□□ 1.03
SYNGAP1-224ENST00000637721 ATP1B4Q9UN42 357 aaPredicted RBP21.48■■□□□ 1.03
SYNGAP1-224ENST00000637721 RICTORQ6R327 1708 aa21.48■■□□□ 1.03
SYNGAP1-224ENST00000637721 PLCH2O75038 1416 aa21.47■■□□□ 1.03
SYNGAP1-224ENST00000637721 ARHGEF40Q8TER5 1519 aa21.44■■□□□ 1.02
SYNGAP1-224ENST00000637721 MYO5CQ9NQX4 1742 aa21.43■■□□□ 1.02
SYNGAP1-224ENST00000637721 CLIP1P30622 1438 aa21.43■■□□□ 1.02
SYNGAP1-224ENST00000637721 TROQ12816 1431 aaPredicted RBP21.43■■□□□ 1.02
SYNGAP1-224ENST00000637721 ZMYM4Q5VZL5 1548 aa21.43■■□□□ 1.02
SYNGAP1-224ENST00000637721 KIF14Q15058 1648 aa21.43■■□□□ 1.02
SYNGAP1-224ENST00000637721 CCDC18Q5T9S5 1454 aa21.42■■□□□ 1.02
SYNGAP1-224ENST00000637721 MAGI2Q86UL8 1455 aa21.42■■□□□ 1.02
SYNGAP1-224ENST00000637721 CASKIN1Q8WXD9 1431 aa21.41■■□□□ 1.02
SYNGAP1-224ENST00000637721 ADAMTSL3P82987 1691 aa21.4■■□□□ 1.02
SYNGAP1-224ENST00000637721 LRRIQ1Q96JM4 1722 aa21.39■■□□□ 1.01
SYNGAP1-224ENST00000637721 EFCAB2Q5VUJ9 269 aa21.39■■□□□ 1.01
SYNGAP1-224ENST00000637721 BCORL1Q5H9F3 1711 aa21.38■■□□□ 1.01
SYNGAP1-224ENST00000637721 HECW2Q9P2P5 1572 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms