RNA–Protein interactions for RNA: ENST00000637381.1

CTSD-210, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 374 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-210ENST00000637381 CUL7Q14999 1698 aa22.21■■□□□ 1.15
CTSD-210ENST00000637381 PRG4Q92954 1404 aaPredicted RBP22.21■■□□□ 1.15
CTSD-210ENST00000637381 KIAA0586Q9BVV6 1533 aa22.15■■□□□ 1.14
CTSD-210ENST00000637381 CARMIL1Q5VZK9 1371 aa22.09■■□□□ 1.13
CTSD-210ENST00000637381 KIF13AQ9H1H9 1805 aa21.99■■□□□ 1.11
CTSD-210ENST00000637381 ADCY10Q96PN6 1610 aa21.96■■□□□ 1.11
CTSD-210ENST00000637381 MAPKBP1O60336 1514 aa21.93■■□□□ 1.1
CTSD-210ENST00000637381 IQGAP2Q13576 1575 aa21.93■■□□□ 1.1
CTSD-210ENST00000637381 RAPGEF2Q9Y4G8 1499 aa21.9■■□□□ 1.1
CTSD-210ENST00000637381 NPM1P06748 294 aaKnown RBP eCLIP21.9■■□□□ 1.1
CTSD-210ENST00000637381 CARMIL2Q6F5E8 1435 aa21.89■■□□□ 1.09
CTSD-210ENST00000637381 ABCC10Q5T3U5 1492 aa21.88■■□□□ 1.09
CTSD-210ENST00000637381 PTPRGP23470 1445 aa21.88■■□□□ 1.09
CTSD-210ENST00000637381 TNIKQ9UKE5 1360 aa21.86■■□□□ 1.09
CTSD-210ENST00000637381 DISP1Q96F81 1524 aa21.84■■□□□ 1.09
CTSD-210ENST00000637381 UGGT2Q9NYU1 1516 aa21.82■■□□□ 1.08
CTSD-210ENST00000637381 DIP2BQ9P265 1576 aa21.82■■□□□ 1.08
CTSD-210ENST00000637381 FAM69CQ0P6D2 419 aa21.8■■□□□ 1.08
CTSD-210ENST00000637381 UHRF1BP1LA0JNW5 1464 aa21.78■■□□□ 1.08
CTSD-210ENST00000637381 ABCC2Q92887 1545 aa21.76■■□□□ 1.07
CTSD-210ENST00000637381 PRXQ9BXM0 1461 aa21.75■■□□□ 1.07
CTSD-210ENST00000637381 CTTNBP2Q8WZ74 1663 aa21.74■■□□□ 1.07
CTSD-210ENST00000637381 KIAA0556O60303 1618 aa21.73■■□□□ 1.07
CTSD-210ENST00000637381 UACAQ9BZF9 1416 aa21.72■■□□□ 1.07
CTSD-210ENST00000637381 TTBK1Q5TCY1 1321 aaPredicted RBP21.69■■□□□ 1.06
CTSD-210ENST00000637381 KDM5BQ9UGL1 1544 aa21.67■■□□□ 1.06
CTSD-210ENST00000637381 PLB1Q6P1J6 1458 aa21.67■■□□□ 1.06
CTSD-210ENST00000637381 ASXL2Q76L83 1435 aa21.66■■□□□ 1.06
CTSD-210ENST00000637381 GLI2P10070 1586 aa21.65■■□□□ 1.06
CTSD-210ENST00000637381 TSPOAP1O95153 1857 aa21.63■■□□□ 1.05
CTSD-210ENST00000637381 GOLGA3Q08378 1498 aa21.63■■□□□ 1.05
CTSD-210ENST00000637381 ZCCHC11Q5TAX3 1644 aaKnown RBP21.6■■□□□ 1.05
CTSD-210ENST00000637381 CSRNP3Q8WYN3 585 aa21.58■■□□□ 1.05
CTSD-210ENST00000637381 PPRC1Q5VV67 1664 aaKnown RBP21.57■■□□□ 1.04
CTSD-210ENST00000637381 KDM6BO15054 1643 aa21.56■■□□□ 1.04
CTSD-210ENST00000637381 AEBP2Q6ZN18 517 aaPredicted RBP21.55■■□□□ 1.04
CTSD-210ENST00000637381 EPRSP07814 1512 aaKnown RBP21.55■■□□□ 1.04
CTSD-210ENST00000637381 ABCA8O94911 1581 aa21.54■■□□□ 1.04
CTSD-210ENST00000637381 EEA1Q15075 1411 aa21.53■■□□□ 1.04
CTSD-210ENST00000637381 MAP3K4Q9Y6R4 1608 aa21.52■■□□□ 1.04
CTSD-210ENST00000637381 WDR7Q9Y4E6 1490 aa21.47■■□□□ 1.03
CTSD-210ENST00000637381 SAMD9Q5K651 1589 aa21.45■■□□□ 1.02
CTSD-210ENST00000637381 TEX14Q8IWB6 1497 aa21.4■■□□□ 1.02
CTSD-210ENST00000637381 COL17A1Q9UMD9 1497 aaPredicted RBP21.39■■□□□ 1.02
CTSD-210ENST00000637381 CFAP43Q8NDM7 1665 aa21.38■■□□□ 1.01
CTSD-210ENST00000637381 P3H3Q8IVL6 736 aa21.37■■□□□ 1.01
CTSD-210ENST00000637381 FAM9AQ8IZU1 332 aaPredicted RBP21.37■■□□□ 1.01
CTSD-210ENST00000637381 ATP10BO94823 1461 aa21.36■■□□□ 1.01
CTSD-210ENST00000637381 KIF21BO75037 1637 aa21.36■■□□□ 1.01
CTSD-210ENST00000637381 MAGI3Q5TCQ9 1506 aa21.35■■□□□ 1.01
CTSD-210ENST00000637381 KDM4FA0A1W2PPD8 638 aa21.33■■□□□ 1.01
CTSD-210ENST00000637381 CD109Q6YHK3 1445 aa21.32■■□□□ 1
CTSD-210ENST00000637381 RAPGEF6Q8TEU7 1601 aa21.31■■□□□ 1
CTSD-210ENST00000637381 KCNH8Q96L42 1107 aa21.31■■□□□ 1
CTSD-210ENST00000637381 CHIC1Q5VXU3 224 aa21.28■■□□□ 1
CTSD-210ENST00000637381 EFCAB5A4FU69 1503 aa21.24■□□□□ 0.99
CTSD-210ENST00000637381 ABCA9Q8IUA7 1624 aa21.24■□□□□ 0.99
CTSD-210ENST00000637381 NUP153P49790 1475 aaKnown RBP21.24■□□□□ 0.99
CTSD-210ENST00000637381 FHOD3Q2V2M9 1422 aa21.23■□□□□ 0.99
CTSD-210ENST00000637381 ARID3CA6NKF2 412 aa21.21■□□□□ 0.99
CTSD-210ENST00000637381 ARAP3Q8WWN8 1544 aa21.19■□□□□ 0.98
CTSD-210ENST00000637381 RANGAP1P46060 587 aaPredicted RBP21.17■□□□□ 0.98
CTSD-210ENST00000637381 PHLDB1Q86UU1 1377 aa21.17■□□□□ 0.98
CTSD-210ENST00000637381 ADGRL1O94910 1474 aa21.15■□□□□ 0.98
CTSD-210ENST00000637381 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.11■□□□□ 0.97
CTSD-210ENST00000637381 HNRNPUL2Q1KMD3 747 aaKnown RBP21.11■□□□□ 0.97
CTSD-210ENST00000637381 NEO1Q92859 1461 aa21.11■□□□□ 0.97
CTSD-210ENST00000637381 PLEKHD1A6NEE1 506 aa21.1■□□□□ 0.97
CTSD-210ENST00000637381 UBTFP17480 764 aaKnown RBP21.1■□□□□ 0.97
CTSD-210ENST00000637381 ARHGAP35Q9NRY4 1499 aa21.07■□□□□ 0.96
CTSD-210ENST00000637381 FMN1Q68DA7 1419 aa21.04■□□□□ 0.96
CTSD-210ENST00000637381 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.03■□□□□ 0.965e-7■■■■□ 21.6
CTSD-210ENST00000637381 CDK13Q14004 1512 aaKnown RBP21■□□□□ 0.95
CTSD-210ENST00000637381 FRMPD1Q5SYB0 1578 aa20.99■□□□□ 0.95
CTSD-210ENST00000637381 RAPGEF3O95398 923 aa20.99■□□□□ 0.95
CTSD-210ENST00000637381 EHMT2Q96KQ7 1210 aa20.99■□□□□ 0.95
CTSD-210ENST00000637381 HECW1Q76N89 1606 aa20.98■□□□□ 0.95
CTSD-210ENST00000637381 TTC37Q6PGP7 1564 aa20.97■□□□□ 0.95
CTSD-210ENST00000637381 CFAP74Q9C0B2 1584 aa20.97■□□□□ 0.95
CTSD-210ENST00000637381 RICTORQ6R327 1708 aa20.95■□□□□ 0.94
CTSD-210ENST00000637381 AKNAQ7Z591 1439 aa20.95■□□□□ 0.94
CTSD-210ENST00000637381 FANCAO15360 1455 aa20.94■□□□□ 0.94
CTSD-210ENST00000637381 DENND4BO75064 1496 aaPredicted RBP20.92■□□□□ 0.94
CTSD-210ENST00000637381 LRRIQ1Q96JM4 1722 aa20.92■□□□□ 0.94
CTSD-210ENST00000637381 PLCH2O75038 1416 aa20.91■□□□□ 0.94
CTSD-210ENST00000637381 ADAMTSL3P82987 1691 aa20.89■□□□□ 0.94
CTSD-210ENST00000637381 CDK11AQ9UQ88 783 aaPredicted RBP20.89■□□□□ 0.93
CTSD-210ENST00000637381 ZMYM4Q5VZL5 1548 aa20.87■□□□□ 0.93
CTSD-210ENST00000637381 ATP1B4Q9UN42 357 aaPredicted RBP20.86■□□□□ 0.93
CTSD-210ENST00000637381 ARHGEF40Q8TER5 1519 aa20.85■□□□□ 0.93
CTSD-210ENST00000637381 MYO5CQ9NQX4 1742 aa20.85■□□□□ 0.93
CTSD-210ENST00000637381 TROQ12816 1431 aaPredicted RBP20.85■□□□□ 0.93
CTSD-210ENST00000637381 BCORL1Q5H9F3 1711 aa20.84■□□□□ 0.93
CTSD-210ENST00000637381 KIF14Q15058 1648 aa20.84■□□□□ 0.93
CTSD-210ENST00000637381 CASKIN1Q8WXD9 1431 aa20.84■□□□□ 0.93
CTSD-210ENST00000637381 MAGI2Q86UL8 1455 aa20.83■□□□□ 0.93
CTSD-210ENST00000637381 HECW2Q9P2P5 1572 aa20.83■□□□□ 0.92
CTSD-210ENST00000637381 EFCAB2Q5VUJ9 269 aa20.8■□□□□ 0.92
CTSD-210ENST00000637381 SCAPERQ9BY12 1400 aa20.79■□□□□ 0.92
CTSD-210ENST00000637381 PTPRMP28827 1452 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms