RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 NUP160Q12769 1436 aa21.43■■□□□ 1.02
LINC00643-207ENST00000637212 KIAA0586Q9BVV6 1533 aa21.42■■□□□ 1.02
LINC00643-207ENST00000637212 CEP162Q5TB80 1403 aa21.38■■□□□ 1.01
LINC00643-207ENST00000637212 OSCARQ8IYS5 282 aa21.36■■□□□ 1.01
LINC00643-207ENST00000637212 JPH4Q96JJ6 628 aa21.34■■□□□ 1.01
LINC00643-207ENST00000637212 CLIP1P30622 1438 aa21.34■■□□□ 1.01
LINC00643-207ENST00000637212 CEP170Q5SW79 1584 aa21.32■■□□□ 1
LINC00643-207ENST00000637212 RANGAP1P46060 587 aaPredicted RBP21.32■■□□□ 1
LINC00643-207ENST00000637212 IQGAP2Q13576 1575 aa21.27■■□□□ 1
LINC00643-207ENST00000637212 CHD1O14646 1710 aa21.26■□□□□ 0.99
LINC00643-207ENST00000637212 CTTNBP2Q8WZ74 1663 aa21.25■□□□□ 0.99
LINC00643-207ENST00000637212 UGGT2Q9NYU1 1516 aa21.24■□□□□ 0.99
LINC00643-207ENST00000637212 ARHGAP35Q9NRY4 1499 aa21.22■□□□□ 0.99
LINC00643-207ENST00000637212 EFCAB5A4FU69 1503 aa21.21■□□□□ 0.99
LINC00643-207ENST00000637212 RIMBP3CA6NJZ7 1639 aa21.2■□□□□ 0.98
LINC00643-207ENST00000637212 RIMBP3BA6NNM3 1639 aa21.2■□□□□ 0.98
LINC00643-207ENST00000637212 RIMBP3Q9UFD9 1639 aa21.2■□□□□ 0.98
LINC00643-207ENST00000637212 P3H3Q8IVL6 736 aa21.19■□□□□ 0.98
LINC00643-207ENST00000637212 CARMIL2Q6F5E8 1435 aa21.19■□□□□ 0.98
LINC00643-207ENST00000637212 CLASP1Q7Z460 1538 aa21.19■□□□□ 0.98
LINC00643-207ENST00000637212 PRG4Q92954 1404 aaPredicted RBP21.15■□□□□ 0.98
LINC00643-207ENST00000637212 DISP1Q96F81 1524 aa21.14■□□□□ 0.98
LINC00643-207ENST00000637212 ARAP1Q96P48 1450 aa21.13■□□□□ 0.97
LINC00643-207ENST00000637212 SAMD9Q5K651 1589 aa21.13■□□□□ 0.97
LINC00643-207ENST00000637212 ARHGEF11O15085 1522 aa21.1■□□□□ 0.97
LINC00643-207ENST00000637212 FHOD3Q2V2M9 1422 aa21.1■□□□□ 0.97
LINC00643-207ENST00000637212 SHROOM2Q13796 1616 aa21.09■□□□□ 0.97
LINC00643-207ENST00000637212 VPS8Q8N3P4 1428 aa21.09■□□□□ 0.97
LINC00643-207ENST00000637212 FMN1Q68DA7 1419 aa21.08■□□□□ 0.97
LINC00643-207ENST00000637212 KIAA0556O60303 1618 aa21.04■□□□□ 0.96
LINC00643-207ENST00000637212 PTPRGP23470 1445 aa21.03■□□□□ 0.96
LINC00643-207ENST00000637212 CASKIN1Q8WXD9 1431 aa20.98■□□□□ 0.95
LINC00643-207ENST00000637212 APLP2Q06481 763 aa20.97■□□□□ 0.95
LINC00643-207ENST00000637212 TTBK1Q5TCY1 1321 aaPredicted RBP20.95■□□□□ 0.94
LINC00643-207ENST00000637212 ATP1B4Q9UN42 357 aaPredicted RBP20.93■□□□□ 0.94
LINC00643-207ENST00000637212 ERCC6L2Q5T890 1561 aa20.92■□□□□ 0.94
LINC00643-207ENST00000637212 FYCO1Q9BQS8 1478 aa20.91■□□□□ 0.94
LINC00643-207ENST00000637212 UACAQ9BZF9 1416 aa20.87■□□□□ 0.93
LINC00643-207ENST00000637212 MAP3K1Q13233 1512 aa20.85■□□□□ 0.93
LINC00643-207ENST00000637212 PLB1Q6P1J6 1458 aa20.85■□□□□ 0.93
LINC00643-207ENST00000637212 ABCA8O94911 1581 aa20.83■□□□□ 0.92
LINC00643-207ENST00000637212 PCF11O94913 1555 aaKnown RBP20.81■□□□□ 0.92
LINC00643-207ENST00000637212 UHRF1BP1LA0JNW5 1464 aa20.81■□□□□ 0.92
LINC00643-207ENST00000637212 CYB5RLQ6IPT4 315 aa20.8■□□□□ 0.92
LINC00643-207ENST00000637212 RAPGEF6Q8TEU7 1601 aa20.79■□□□□ 0.92
LINC00643-207ENST00000637212 CDK11AQ9UQ88 783 aaPredicted RBP20.79■□□□□ 0.92
LINC00643-207ENST00000637212 NUP153P49790 1475 aaKnown RBP20.79■□□□□ 0.92
LINC00643-207ENST00000637212 CCDC18Q5T9S5 1454 aa20.79■□□□□ 0.92
LINC00643-207ENST00000637212 HECW1Q76N89 1606 aa20.78■□□□□ 0.92
LINC00643-207ENST00000637212 EPRSP07814 1512 aaKnown RBP20.78■□□□□ 0.92
LINC00643-207ENST00000637212 KANK4Q5T7N3 995 aaPredicted RBP20.75■□□□□ 0.91
LINC00643-207ENST00000637212 ABCC2Q92887 1545 aa20.74■□□□□ 0.91
LINC00643-207ENST00000637212 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.74■□□□□ 0.91
LINC00643-207ENST00000637212 HNRNPUL2Q1KMD3 747 aaKnown RBP20.74■□□□□ 0.91
LINC00643-207ENST00000637212 ATP10BO94823 1461 aa20.74■□□□□ 0.91
LINC00643-207ENST00000637212 PLEKHD1A6NEE1 506 aa20.72■□□□□ 0.91
LINC00643-207ENST00000637212 ARID3CA6NKF2 412 aa20.72■□□□□ 0.91
LINC00643-207ENST00000637212 TIAM1Q13009 1591 aa20.72■□□□□ 0.91
LINC00643-207ENST00000637212 NPM1P06748 294 aaKnown RBP eCLIP20.71■□□□□ 0.91
LINC00643-207ENST00000637212 PPARGC1BQ86YN6 1023 aaKnown RBP20.71■□□□□ 0.91
LINC00643-207ENST00000637212 LRRC9Q6ZRR7 1453 aa20.69■□□□□ 0.9
LINC00643-207ENST00000637212 MTUS2Q5JR59 1369 aa20.69■□□□□ 0.9
LINC00643-207ENST00000637212 KDM5BQ9UGL1 1544 aa20.68■□□□□ 0.9
LINC00643-207ENST00000637212 CDK13Q14004 1512 aaKnown RBP20.66■□□□□ 0.9
LINC00643-207ENST00000637212 ADCY10Q96PN6 1610 aa20.61■□□□□ 0.89
LINC00643-207ENST00000637212 TROQ12816 1431 aaPredicted RBP20.61■□□□□ 0.89
LINC00643-207ENST00000637212 CFAP43Q8NDM7 1665 aa20.61■□□□□ 0.89
LINC00643-207ENST00000637212 TRHP20396 242 aaPredicted RBP20.6■□□□□ 0.89
LINC00643-207ENST00000637212 LRRIQ1Q96JM4 1722 aa20.57■□□□□ 0.88
LINC00643-207ENST00000637212 EHBP1L1Q8N3D4 1523 aa20.57■□□□□ 0.88
LINC00643-207ENST00000637212 MAGI3Q5TCQ9 1506 aa20.55■□□□□ 0.88
LINC00643-207ENST00000637212 TRIM26Q12899 539 aaPredicted RBP20.54■□□□□ 0.88
LINC00643-207ENST00000637212 ZCCHC11Q5TAX3 1644 aaKnown RBP20.51■□□□□ 0.87
LINC00643-207ENST00000637212 NCOA2Q15596 1464 aa20.5■□□□□ 0.87
LINC00643-207ENST00000637212 KCNH8Q96L42 1107 aa20.5■□□□□ 0.87
LINC00643-207ENST00000637212 ASXL2Q76L83 1435 aa20.5■□□□□ 0.87
LINC00643-207ENST00000637212 PHLDB1Q86UU1 1377 aa20.47■□□□□ 0.87
LINC00643-207ENST00000637212 WDR7Q9Y4E6 1490 aa20.47■□□□□ 0.87
LINC00643-207ENST00000637212 CCNB3Q8WWL7 1395 aa20.46■□□□□ 0.87
LINC00643-207ENST00000637212 SUPT6HQ7KZ85 1726 aaKnown RBP20.44■□□□□ 0.86
LINC00643-207ENST00000637212 MAPKBP1O60336 1514 aa20.43■□□□□ 0.86
LINC00643-207ENST00000637212 MYOM3Q5VTT5 1437 aa20.42■□□□□ 0.86
LINC00643-207ENST00000637212 ABCC10Q5T3U5 1492 aa20.42■□□□□ 0.86
LINC00643-207ENST00000637212 MIA2Q96PC5 1412 aa20.41■□□□□ 0.86
LINC00643-207ENST00000637212 RRBP1Q9P2E9 1410 aaKnown RBP20.41■□□□□ 0.86
LINC00643-207ENST00000637212 KIF14Q15058 1648 aa20.39■□□□□ 0.86
LINC00643-207ENST00000637212 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.39■□□□□ 0.85
LINC00643-207ENST00000637212 CFDP1Q9UEE9 299 aaPredicted RBP20.39■□□□□ 0.85
LINC00643-207ENST00000637212 GPATCH8Q9UKJ3 1502 aaKnown RBP20.38■□□□□ 0.85
LINC00643-207ENST00000637212 FGD6Q6ZV73 1430 aa20.37■□□□□ 0.85
LINC00643-207ENST00000637212 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.34■□□□□ 0.85
LINC00643-207ENST00000637212 PLCH2O75038 1416 aa20.34■□□□□ 0.85
LINC00643-207ENST00000637212 EFCAB2Q5VUJ9 269 aa20.33■□□□□ 0.85
LINC00643-207ENST00000637212 FAM50AQ14320 339 aaKnown RBP20.32■□□□□ 0.84
LINC00643-207ENST00000637212 PCGF6Q9BYE7 350 aa20.32■□□□□ 0.84
LINC00643-207ENST00000637212 FAM69CQ0P6D2 419 aa20.3■□□□□ 0.84
LINC00643-207ENST00000637212 TCOF1Q13428 1488 aaKnown RBP20.29■□□□□ 0.84
LINC00643-207ENST00000637212 CD109Q6YHK3 1445 aa20.27■□□□□ 0.84
LINC00643-207ENST00000637212 RSPH4AQ5TD94 716 aa20.27■□□□□ 0.84
LINC00643-207ENST00000637212 ZNF777Q9ULD5 760 aaPredicted RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms