RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 ABCA5Q8WWZ7 1642 aa18.01■□□□□ 0.47
CLN8-212ENST00000637083 CTTNBP2Q8WZ74 1663 aa18.01■□□□□ 0.47
CLN8-212ENST00000637083 GAPVD1Q14C86 1478 aa17.98■□□□□ 0.47
CLN8-212ENST00000637083 AQRO60306 1485 aaKnown RBP eCLIP17.97■□□□□ 0.47
CLN8-212ENST00000637083 LRRC9Q6ZRR7 1453 aa17.97■□□□□ 0.47
CLN8-212ENST00000637083 KIF21AQ7Z4S6 1674 aa17.97■□□□□ 0.47
CLN8-212ENST00000637083 DIEXFQ68CQ4 756 aaKnown RBP17.96■□□□□ 0.47
CLN8-212ENST00000637083 ZNF316A6NFI3 1004 aaPredicted RBP17.95■□□□□ 0.46
CLN8-212ENST00000637083 P3H3Q8IVL6 736 aa17.95■□□□□ 0.46
CLN8-212ENST00000637083 FYCO1Q9BQS8 1478 aa17.95■□□□□ 0.46
CLN8-212ENST00000637083 CFAP43Q8NDM7 1665 aa17.95■□□□□ 0.46
CLN8-212ENST00000637083 FMN1Q68DA7 1419 aa17.94■□□□□ 0.46
CLN8-212ENST00000637083 CASKIN1Q8WXD9 1431 aa17.93■□□□□ 0.46
CLN8-212ENST00000637083 PCF11O94913 1555 aaKnown RBP17.92■□□□□ 0.46
CLN8-212ENST00000637083 FHOD3Q2V2M9 1422 aa17.9■□□□□ 0.46
CLN8-212ENST00000637083 DHX57Q6P158 1386 aaKnown RBP17.89■□□□□ 0.46
CLN8-212ENST00000637083 TARBP1Q13395 1621 aaKnown RBP17.89■□□□□ 0.45
CLN8-212ENST00000637083 MRC2Q9UBG0 1479 aa17.87■□□□□ 0.45
CLN8-212ENST00000637083 SAMD9Q5K651 1589 aa17.84■□□□□ 0.45
CLN8-212ENST00000637083 ATP1B4Q9UN42 357 aaPredicted RBP17.84■□□□□ 0.45
CLN8-212ENST00000637083 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.81■□□□□ 0.44
CLN8-212ENST00000637083 PHLDB1Q86UU1 1377 aa17.81■□□□□ 0.44
CLN8-212ENST00000637083 THOC2Q8NI27 1593 aaKnown RBP17.8■□□□□ 0.44
CLN8-212ENST00000637083 PBRM1Q86U86 1689 aa17.8■□□□□ 0.44
CLN8-212ENST00000637083 SNAPC4Q5SXM2 1469 aa17.79■□□□□ 0.44
CLN8-212ENST00000637083 ITGAEP38570 1179 aa17.77■□□□□ 0.44
CLN8-212ENST00000637083 IFT140Q96RY7 1462 aa17.76■□□□□ 0.43
CLN8-212ENST00000637083 SETD5Q9C0A6 1442 aa17.76■□□□□ 0.43
CLN8-212ENST00000637083 GRIN2BQ13224 1484 aa17.76■□□□□ 0.43
CLN8-212ENST00000637083 FAM50AQ14320 339 aaKnown RBP17.74■□□□□ 0.43
CLN8-212ENST00000637083 RAB3GAP2Q9H2M9 1393 aa17.74■□□□□ 0.43
CLN8-212ENST00000637083 ADAMTS12P58397 1594 aa17.73■□□□□ 0.43
CLN8-212ENST00000637083 MTUS2Q5JR59 1369 aa17.73■□□□□ 0.43
CLN8-212ENST00000637083 WDR62O43379 1518 aa17.73■□□□□ 0.43
CLN8-212ENST00000637083 CENPBP07199 599 aaPredicted RBP17.71■□□□□ 0.42
CLN8-212ENST00000637083 IQGAP2Q13576 1575 aa17.7■□□□□ 0.42
CLN8-212ENST00000637083 CCDC18Q5T9S5 1454 aa17.7■□□□□ 0.42
CLN8-212ENST00000637083 ZNF608Q9ULD9 1512 aaPredicted RBP17.7■□□□□ 0.42
CLN8-212ENST00000637083 EHBP1L1Q8N3D4 1523 aa17.68■□□□□ 0.42
CLN8-212ENST00000637083 FGD6Q6ZV73 1430 aa17.67■□□□□ 0.42
CLN8-212ENST00000637083 ERCC6Q03468 1493 aa17.66■□□□□ 0.42
CLN8-212ENST00000637083 SUPT6HQ7KZ85 1726 aaKnown RBP17.65■□□□□ 0.42
CLN8-212ENST00000637083 HECW1Q76N89 1606 aa17.65■□□□□ 0.42
CLN8-212ENST00000637083 UGGT2Q9NYU1 1516 aa17.62■□□□□ 0.41
CLN8-212ENST00000637083 NCOA2Q15596 1464 aa17.62■□□□□ 0.41
CLN8-212ENST00000637083 ACIN1Q9UKV3 1341 aaKnown RBP17.62■□□□□ 0.41
CLN8-212ENST00000637083 MYOM3Q5VTT5 1437 aa17.62■□□□□ 0.41
CLN8-212ENST00000637083 LRRIQ1Q96JM4 1722 aa17.61■□□□□ 0.41
CLN8-212ENST00000637083 TIMELESSQ9UNS1 1208 aa17.6■□□□□ 0.41
CLN8-212ENST00000637083 MAPKBP1O60336 1514 aa17.6■□□□□ 0.41
CLN8-212ENST00000637083 KIAA0586Q9BVV6 1533 aa17.59■□□□□ 0.41
CLN8-212ENST00000637083 ARHGEF11O15085 1522 aa17.56■□□□□ 0.4
CLN8-212ENST00000637083 EPRSP07814 1512 aaKnown RBP17.55■□□□□ 0.4
CLN8-212ENST00000637083 EIF4G3O43432 1585 aaKnown RBP17.54■□□□□ 0.4
CLN8-212ENST00000637083 GRIN2AQ12879 1464 aa17.54■□□□□ 0.4
CLN8-212ENST00000637083 MAGI1Q96QZ7 1491 aaPredicted RBP17.54■□□□□ 0.4
CLN8-212ENST00000637083 HFM1A2PYH4 1435 aa17.53■□□□□ 0.4
CLN8-212ENST00000637083 SCAF1Q9H7N4 1312 aaKnown RBP17.52■□□□□ 0.4
CLN8-212ENST00000637083 MIER1Q8N108 512 aa17.52■□□□□ 0.39
CLN8-212ENST00000637083 PTPN23Q9H3S7 1636 aa17.51■□□□□ 0.39
CLN8-212ENST00000637083 CHMP7Q8WUX9 453 aaPredicted RBP17.51■□□□□ 0.39
CLN8-212ENST00000637083 KIAA0556O60303 1618 aa17.5■□□□□ 0.39
CLN8-212ENST00000637083 TCOF1Q13428 1488 aaKnown RBP17.5■□□□□ 0.39
CLN8-212ENST00000637083 NEUROD1Q13562 356 aa17.5■□□□□ 0.39
CLN8-212ENST00000637083 MIA2Q96PC5 1412 aa17.49■□□□□ 0.39
CLN8-212ENST00000637083 MAGI3Q5TCQ9 1506 aa17.48■□□□□ 0.39
CLN8-212ENST00000637083 UACAQ9BZF9 1416 aa17.48■□□□□ 0.39
CLN8-212ENST00000637083 SYNJ2O15056 1496 aa17.47■□□□□ 0.39
CLN8-212ENST00000637083 DISP1Q96F81 1524 aa17.46■□□□□ 0.39
CLN8-212ENST00000637083 FBLN2P98095 1184 aa17.45■□□□□ 0.38
CLN8-212ENST00000637083 CDK11AQ9UQ88 783 aaPredicted RBP17.45■□□□□ 0.38
CLN8-212ENST00000637083 NAIPQ13075 1403 aa17.44■□□□□ 0.38
CLN8-212ENST00000637083 PTPRKQ15262 1439 aa17.44■□□□□ 0.38
CLN8-212ENST00000637083 AKNAQ7Z591 1439 aa17.44■□□□□ 0.38
CLN8-212ENST00000637083 CDK13Q14004 1512 aaKnown RBP17.43■□□□□ 0.38
CLN8-212ENST00000637083 ARID3CA6NKF2 412 aa17.43■□□□□ 0.38
CLN8-212ENST00000637083 RAPGEF6Q8TEU7 1601 aa17.42■□□□□ 0.38
CLN8-212ENST00000637083 SIN3AQ96ST3 1273 aa17.41■□□□□ 0.38
CLN8-212ENST00000637083 CARMIL2Q6F5E8 1435 aa17.4■□□□□ 0.38
CLN8-212ENST00000637083 JPH4Q96JJ6 628 aa17.38■□□□□ 0.37
CLN8-212ENST00000637083 GCC2Q8IWJ2 1684 aa17.38■□□□□ 0.37
CLN8-212ENST00000637083 NUP153P49790 1475 aaKnown RBP17.37■□□□□ 0.37
CLN8-212ENST00000637083 CEP170Q5SW79 1584 aa17.37■□□□□ 0.37
CLN8-212ENST00000637083 PPP1R15AO75807 674 aaPredicted RBP17.37■□□□□ 0.37
CLN8-212ENST00000637083 TONSLQ96HA7 1378 aa17.36■□□□□ 0.37
CLN8-212ENST00000637083 NUP160Q12769 1436 aa17.36■□□□□ 0.37
CLN8-212ENST00000637083 YTHDC1Q96MU7 727 aaKnown RBP17.35■□□□□ 0.37
CLN8-212ENST00000637083 GTF3C3Q9Y5Q9 886 aa17.32■□□□□ 0.36
CLN8-212ENST00000637083 ROCK1Q13464 1354 aa17.32■□□□□ 0.36
CLN8-212ENST00000637083 TROQ12816 1431 aaPredicted RBP17.31■□□□□ 0.36
CLN8-212ENST00000637083 RRP7BPQ9NSQ0 103 aa17.3■□□□□ 0.36
CLN8-212ENST00000637083 CHIC2Q9UKJ5 165 aa17.28■□□□□ 0.36
CLN8-212ENST00000637083 DAPK1P53355 1430 aa17.28■□□□□ 0.36
CLN8-212ENST00000637083 ITSN2Q9NZM3 1697 aa17.27■□□□□ 0.36
CLN8-212ENST00000637083 DNMT1P26358 1616 aaKnown RBP17.27■□□□□ 0.36
CLN8-212ENST00000637083 TRIM52Q96A61 297 aa17.26■□□□□ 0.35
CLN8-212ENST00000637083 ADCY10Q96PN6 1610 aa17.26■□□□□ 0.35
CLN8-212ENST00000637083 PLB1Q6P1J6 1458 aa17.25■□□□□ 0.35
CLN8-212ENST00000637083 DNAJC5Q9H3Z4 198 aa17.24■□□□□ 0.35
CLN8-212ENST00000637083 ABCC5O15440 1437 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms