RNA–Protein interactions for RNA: ENST00000637044.1

GABRA1-216, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5

Gene GABRA1, Length 4,108 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-216ENST00000637044 FAM50AQ14320 339 aaKnown RBP12.37□□□□□ -0.43
GABRA1-216ENST00000637044 ABCA10Q8WWZ4 1543 aa12.35□□□□□ -0.43
GABRA1-216ENST00000637044 KCNH8Q96L42 1107 aa12.35□□□□□ -0.43
GABRA1-216ENST00000637044 KIF21AQ7Z4S6 1674 aa12.35□□□□□ -0.43
GABRA1-216ENST00000637044 ZNF608Q9ULD9 1512 aaPredicted RBP12.34□□□□□ -0.43
GABRA1-216ENST00000637044 PLEKHD1A6NEE1 506 aa12.34□□□□□ -0.43
GABRA1-216ENST00000637044 ZNF777Q9ULD5 760 aaPredicted RBP12.34□□□□□ -0.43
GABRA1-216ENST00000637044 SNAPC4Q5SXM2 1469 aa12.34□□□□□ -0.43
GABRA1-216ENST00000637044 CYB5RLQ6IPT4 315 aa12.32□□□□□ -0.44
GABRA1-216ENST00000637044 MTUS2Q5JR59 1369 aa12.3□□□□□ -0.44
GABRA1-216ENST00000637044 WDR62O43379 1518 aa12.28□□□□□ -0.44
GABRA1-216ENST00000637044 TRHP20396 242 aaPredicted RBP12.27□□□□□ -0.44
GABRA1-216ENST00000637044 BIVM-ERCC5R4GMW8 1640 aa12.25□□□□□ -0.45
GABRA1-216ENST00000637044 PTPRGP23470 1445 aa12.25□□□□□ -0.45
GABRA1-216ENST00000637044 MAGI1Q96QZ7 1491 aaPredicted RBP12.24□□□□□ -0.45
GABRA1-216ENST00000637044 SYNJ2O15056 1496 aa12.23□□□□□ -0.45
GABRA1-216ENST00000637044 FHOD3Q2V2M9 1422 aa12.22□□□□□ -0.45
GABRA1-216ENST00000637044 FMN1Q68DA7 1419 aa12.21□□□□□ -0.46
GABRA1-216ENST00000637044 ERICH3Q5RHP9 1530 aa12.2□□□□□ -0.46
GABRA1-216ENST00000637044 PRDM2Q13029 1718 aa12.2□□□□□ -0.46
GABRA1-216ENST00000637044 PRXQ9BXM0 1461 aa12.2□□□□□ -0.46
GABRA1-216ENST00000637044 PRG4Q92954 1404 aaPredicted RBP12.19□□□□□ -0.46
GABRA1-216ENST00000637044 GRIN2AQ12879 1464 aa12.17□□□□□ -0.46
GABRA1-216ENST00000637044 CFDP1Q9UEE9 299 aaPredicted RBP12.15□□□□□ -0.46
GABRA1-216ENST00000637044 KIAA0586Q9BVV6 1533 aa12.15□□□□□ -0.47
GABRA1-216ENST00000637044 TSPY4P0CV99 314 aa12.14□□□□□ -0.47
GABRA1-216ENST00000637044 TSPY10P0CW01 314 aa12.14□□□□□ -0.47
GABRA1-216ENST00000637044 TRIM52Q96A61 297 aa12.14□□□□□ -0.47
GABRA1-216ENST00000637044 VPS8Q8N3P4 1428 aa12.14□□□□□ -0.47
GABRA1-216ENST00000637044 CENPBP07199 599 aaPredicted RBP12.13□□□□□ -0.47
GABRA1-216ENST00000637044 THOC2Q8NI27 1593 aaKnown RBP12.12□□□□□ -0.47
GABRA1-216ENST00000637044 CUL7Q14999 1698 aa12.11□□□□□ -0.47
GABRA1-216ENST00000637044 EIF4G3O43432 1585 aaKnown RBP12.11□□□□□ -0.47
GABRA1-216ENST00000637044 KIF21BO75037 1637 aa12.11□□□□□ -0.47
GABRA1-216ENST00000637044 CHIC2Q9UKJ5 165 aa12.09□□□□□ -0.47
GABRA1-216ENST00000637044 ESF1Q9H501 851 aaKnown RBP12.09□□□□□ -0.47
GABRA1-216ENST00000637044 CCNB3Q8WWL7 1395 aa12.08□□□□□ -0.48
GABRA1-216ENST00000637044 TARBP1Q13395 1621 aaKnown RBP12.05□□□□□ -0.48
GABRA1-216ENST00000637044 IQGAP2Q13576 1575 aa12.05□□□□□ -0.48
GABRA1-216ENST00000637044 KANK4Q5T7N3 995 aaPredicted RBP12.04□□□□□ -0.48
GABRA1-216ENST00000637044 EFCAB2Q5VUJ9 269 aa12.03□□□□□ -0.48
GABRA1-216ENST00000637044 FAM69CQ0P6D2 419 aa12.02□□□□□ -0.49
GABRA1-216ENST00000637044 ADAMTS12P58397 1594 aa12.01□□□□□ -0.49
GABRA1-216ENST00000637044 NEUROD1Q13562 356 aa12□□□□□ -0.49
GABRA1-216ENST00000637044 PLPPR3Q6T4P5 718 aa12□□□□□ -0.49
GABRA1-216ENST00000637044 ARHGAP35Q9NRY4 1499 aa12□□□□□ -0.49
GABRA1-216ENST00000637044 PELP1Q8IZL8 1130 aaKnown RBP12□□□□□ -0.49
GABRA1-216ENST00000637044 ABCA5Q8WWZ7 1642 aa12□□□□□ -0.49
GABRA1-216ENST00000637044 WDR97A6NE52 1622 aa11.99□□□□□ -0.49
GABRA1-216ENST00000637044 ARID4BQ4LE39 1312 aaPredicted RBP11.99□□□□□ -0.49
GABRA1-216ENST00000637044 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.99□□□□□ -0.49
GABRA1-216ENST00000637044 EFCAB5A4FU69 1503 aa11.98□□□□□ -0.49
GABRA1-216ENST00000637044 CCDC18Q5T9S5 1454 aa11.98□□□□□ -0.49
GABRA1-216ENST00000637044 DIEXFQ68CQ4 756 aaKnown RBP11.97□□□□□ -0.49
GABRA1-216ENST00000637044 RRP7BPQ9NSQ0 103 aa11.97□□□□□ -0.49
GABRA1-216ENST00000637044 UACAQ9BZF9 1416 aa11.97□□□□□ -0.49
GABRA1-216ENST00000637044 ARAP1Q96P48 1450 aa11.96□□□□□ -0.49
GABRA1-216ENST00000637044 NUP160Q12769 1436 aa11.96□□□□□ -0.5
GABRA1-216ENST00000637044 PBRM1Q86U86 1689 aa11.95□□□□□ -0.5
GABRA1-216ENST00000637044 ACIN1Q9UKV3 1341 aaKnown RBP11.94□□□□□ -0.5
GABRA1-216ENST00000637044 CASKIN1Q8WXD9 1431 aa11.94□□□□□ -0.5
GABRA1-216ENST00000637044 ZNF316A6NFI3 1004 aaPredicted RBP11.94□□□□□ -0.5
GABRA1-216ENST00000637044 PLB1Q6P1J6 1458 aa11.91□□□□□ -0.5
GABRA1-216ENST00000637044 HNRNPMP52272 730 aaKnown RBP eCLIP11.9□□□□□ -0.5
GABRA1-216ENST00000637044 YTHDC1Q96MU7 727 aaKnown RBP11.89□□□□□ -0.51
GABRA1-216ENST00000637044 STAG3Q9UJ98 1225 aa11.88□□□□□ -0.51
GABRA1-216ENST00000637044 TONSLQ96HA7 1378 aa11.88□□□□□ -0.51
GABRA1-216ENST00000637044 FYCO1Q9BQS8 1478 aa11.88□□□□□ -0.51
GABRA1-216ENST00000637044 MLECQ14165 292 aa11.88□□□□□ -0.51
GABRA1-216ENST00000637044 CHGAP10645 457 aaKnown RBP11.87□□□□□ -0.51
GABRA1-216ENST00000637044 CLSPNQ9HAW4 1339 aa11.86□□□□□ -0.51
GABRA1-216ENST00000637044 RSPH4AQ5TD94 716 aa11.86□□□□□ -0.51
GABRA1-216ENST00000637044 SPAG9O60271 1321 aaKnown RBP11.86□□□□□ -0.51
GABRA1-216ENST00000637044 BCANQ96GW7 911 aa11.85□□□□□ -0.51
GABRA1-216ENST00000637044 POLR3GLQ9BT43 218 aa11.85□□□□□ -0.51
GABRA1-216ENST00000637044 UGGT2Q9NYU1 1516 aa11.85□□□□□ -0.51
GABRA1-216ENST00000637044 CEP170Q5SW79 1584 aa11.84□□□□□ -0.51
GABRA1-216ENST00000637044 SLC4A1APQ9BWU0 796 aaKnown RBP11.83□□□□□ -0.52
GABRA1-216ENST00000637044 TROQ12816 1431 aaPredicted RBP11.83□□□□□ -0.52
GABRA1-216ENST00000637044 GGT6Q6P531 493 aa11.83□□□□□ -0.52
GABRA1-216ENST00000637044 ZNF326Q5BKZ1 582 aaKnown RBP11.82□□□□□ -0.52
GABRA1-216ENST00000637044 DNAJC5Q9H3Z4 198 aa11.82□□□□□ -0.52
GABRA1-216ENST00000637044 HECW1Q76N89 1606 aa11.82□□□□□ -0.52
GABRA1-216ENST00000637044 EPRSP07814 1512 aaKnown RBP11.82□□□□□ -0.52
GABRA1-216ENST00000637044 CDK13Q14004 1512 aaKnown RBP11.8□□□□□ -0.52
GABRA1-216ENST00000637044 CHD1O14646 1710 aa11.8□□□□□ -0.52
GABRA1-216ENST00000637044 LRRC9Q6ZRR7 1453 aa11.8□□□□□ -0.52
GABRA1-216ENST00000637044 CTTNBP2Q8WZ74 1663 aa11.8□□□□□ -0.52
GABRA1-216ENST00000637044 ZNF644Q9H582 1327 aaPredicted RBP11.79□□□□□ -0.52
GABRA1-216ENST00000637044 KIAA0556O60303 1618 aa11.78□□□□□ -0.52
GABRA1-216ENST00000637044 ANKRD30AQ9BXX3 1397 aa11.78□□□□□ -0.52
GABRA1-216ENST00000637044 DISP1Q96F81 1524 aa11.78□□□□□ -0.52
GABRA1-216ENST00000637044 KIF3BO15066 747 aa11.78□□□□□ -0.52
GABRA1-216ENST00000637044 NEFLP07196 543 aa11.77□□□□□ -0.52
GABRA1-216ENST00000637044 NCOA2Q15596 1464 aa11.77□□□□□ -0.53
GABRA1-216ENST00000637044 AFAP1Q8N556 730 aa11.76□□□□□ -0.53
GABRA1-216ENST00000637044 CD109Q6YHK3 1445 aa11.76□□□□□ -0.53
GABRA1-216ENST00000637044 SETD5Q9C0A6 1442 aa11.76□□□□□ -0.53
GABRA1-216ENST00000637044 ARHGAP5Q13017 1502 aa11.76□□□□□ -0.53
GABRA1-216ENST00000637044 KANK1Q14678 1352 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms