RNA–Protein interactions for RNA: ENST00000636769.1

SCN2A-213, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 8,573 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-213ENST00000636769 RSPH6AQ9H0K4 717 aa7.98□□□□□ -1.13
SCN2A-213ENST00000636769 IRX6P78412 446 aaPredicted RBP7.98□□□□□ -1.13
SCN2A-213ENST00000636769 PTMSP20962 102 aa7.98□□□□□ -1.13
SCN2A-213ENST00000636769 PNNQ9H307 717 aaKnown RBP7.97□□□□□ -1.13
SCN2A-213ENST00000636769 EIF4G2P78344 907 aaKnown RBP eCLIP7.97□□□□□ -1.13
SCN2A-213ENST00000636769 MSNP26038 577 aaKnown RBP7.97□□□□□ -1.13
SCN2A-213ENST00000636769 LAS1LQ9Y4W2 734 aaKnown RBP7.96□□□□□ -1.14
SCN2A-213ENST00000636769 USP35Q9P2H5 1018 aa7.96□□□□□ -1.14
SCN2A-213ENST00000636769 NRDCO43847 1150 aa7.95□□□□□ -1.14
SCN2A-213ENST00000636769 CCER2I3L3R5 266 aa7.95□□□□□ -1.14
SCN2A-213ENST00000636769 GOLGA6L6A8MZA4 724 aa7.95□□□□□ -1.14
SCN2A-213ENST00000636769 ZRSR1Q15695 479 aaKnown RBP7.93□□□□□ -1.14
SCN2A-213ENST00000636769 CASC1Q6TDU7 716 aa7.92□□□□□ -1.14
SCN2A-213ENST00000636769 TSHZ2Q9NRE2 1034 aa7.92□□□□□ -1.14
SCN2A-213ENST00000636769 ARID4BQ4LE39 1312 aaPredicted RBP7.92□□□□□ -1.14
SCN2A-213ENST00000636769 TIMELESSQ9UNS1 1208 aa7.92□□□□□ -1.14
SCN2A-213ENST00000636769 CHMP4BQ9H444 224 aaKnown RBP7.91□□□□□ -1.14
SCN2A-213ENST00000636769 CFAP44Q96MT7 982 aa7.9□□□□□ -1.14
SCN2A-213ENST00000636769 SALL2Q9Y467 1007 aaPredicted RBP7.9□□□□□ -1.15
SCN2A-213ENST00000636769 EEA1Q15075 1411 aa7.89□□□□□ -1.15
SCN2A-213ENST00000636769 MS4A1P11836 297 aa7.89□□□□□ -1.15
SCN2A-213ENST00000636769 HSP90AA2PQ14568 343 aaPredicted RBP7.89□□□□□ -1.15
SCN2A-213ENST00000636769 SCRIBQ14160 1630 aa7.89□□□□□ -1.15
SCN2A-213ENST00000636769 TCERG1O14776 1098 aaKnown RBP7.89□□□□□ -1.15
SCN2A-213ENST00000636769 SLC24A1O60721 1099 aa7.88□□□□□ -1.15
SCN2A-213ENST00000636769 IPO9Q96P70 1041 aaKnown RBP7.88□□□□□ -1.15
SCN2A-213ENST00000636769 RSF1Q96T23 1441 aaPredicted RBP7.87□□□□□ -1.15
SCN2A-213ENST00000636769 HSCBQ8IWL3 235 aa7.87□□□□□ -1.15
SCN2A-213ENST00000636769 TNNT3P45378 269 aaPredicted RBP7.87□□□□□ -1.15
SCN2A-213ENST00000636769 KIAA2012Q0VF49 1180 aa7.86□□□□□ -1.15
SCN2A-213ENST00000636769 GBP4Q96PP9 640 aa7.86□□□□□ -1.15
SCN2A-213ENST00000636769 HSP90AB1P08238 724 aaKnown RBP7.86□□□□□ -1.15
SCN2A-213ENST00000636769 CLIP1P30622 1438 aa7.85□□□□□ -1.15
SCN2A-213ENST00000636769 GOLGA6L3A6NEY3 463 aa7.85□□□□□ -1.15
SCN2A-213ENST00000636769 FANCIQ9NVI1 1328 aa7.84□□□□□ -1.15
SCN2A-213ENST00000636769 CDCA8Q53HL2 280 aa7.84□□□□□ -1.15
SCN2A-213ENST00000636769 B4GALNT3Q6L9W6 998 aa7.84□□□□□ -1.15
SCN2A-213ENST00000636769 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.83□□□□□ -1.16
SCN2A-213ENST00000636769 VSIG10Q8N0Z9 540 aa7.83□□□□□ -1.16
SCN2A-213ENST00000636769 RGS3P49796 1198 aa7.82□□□□□ -1.16
SCN2A-213ENST00000636769 FTSJ3Q8IY81 847 aaKnown RBP7.81□□□□□ -1.16
SCN2A-213ENST00000636769 CFAP53Q96M91 514 aa7.81□□□□□ -1.16
SCN2A-213ENST00000636769 SYAP1Q96A49 352 aaPredicted RBP7.81□□□□□ -1.16
SCN2A-213ENST00000636769 CEP162Q5TB80 1403 aa7.8□□□□□ -1.16
SCN2A-213ENST00000636769 PLCB2Q00722 1185 aa7.79□□□□□ -1.16
SCN2A-213ENST00000636769 GOLGA3Q08378 1498 aa7.79□□□□□ -1.16
SCN2A-213ENST00000636769 GSE1Q14687 1217 aa7.79□□□□□ -1.16
SCN2A-213ENST00000636769 MYO15BQ96JP2 1530 aa7.78□□□□□ -1.16
SCN2A-213ENST00000636769 TNIKQ9UKE5 1360 aa7.78□□□□□ -1.16
SCN2A-213ENST00000636769 ZNF777Q9ULD5 760 aaPredicted RBP7.78□□□□□ -1.16
SCN2A-213ENST00000636769 P3H3Q8IVL6 736 aa7.78□□□□□ -1.16
SCN2A-213ENST00000636769 GOLGA6L4A6NEF3 574 aa7.78□□□□□ -1.16
SCN2A-213ENST00000636769 MTUS2Q5JR59 1369 aa7.77□□□□□ -1.17
SCN2A-213ENST00000636769 KNSTRNQ9Y448 316 aa7.77□□□□□ -1.17
SCN2A-213ENST00000636769 MTERF4Q7Z6M4 381 aaKnown RBP7.77□□□□□ -1.17
SCN2A-213ENST00000636769 MAP7D2Q96T17 732 aa7.77□□□□□ -1.17
SCN2A-213ENST00000636769 MCCP23508 829 aa7.76□□□□□ -1.17
SCN2A-213ENST00000636769 HIRIP3Q9BW71 556 aaPredicted RBP7.76□□□□□ -1.17
SCN2A-213ENST00000636769 DDX11L8A8MPP1 907 aa7.76□□□□□ -1.17
SCN2A-213ENST00000636769 TSPY4P0CV99 314 aa7.75□□□□□ -1.17
SCN2A-213ENST00000636769 TSPY10P0CW01 314 aa7.75□□□□□ -1.17
SCN2A-213ENST00000636769 DRC7Q8IY82 874 aa7.75□□□□□ -1.17
SCN2A-213ENST00000636769 SKOR2Q2VWA4 1001 aaPredicted RBP7.74□□□□□ -1.17
SCN2A-213ENST00000636769 GOLGA6L1Q8N7Z2 621 aa7.74□□□□□ -1.17
SCN2A-213ENST00000636769 HTATSF1O43719 755 aaKnown RBP7.73□□□□□ -1.17
SCN2A-213ENST00000636769 PKNOX2Q96KN3 472 aa7.73□□□□□ -1.17
SCN2A-213ENST00000636769 PHF14O94880 888 aa7.73□□□□□ -1.17
SCN2A-213ENST00000636769 AMER1Q5JTC6 1135 aaPredicted RBP7.73□□□□□ -1.17
SCN2A-213ENST00000636769 CSPP1Q1MSJ5 1256 aa7.73□□□□□ -1.17
SCN2A-213ENST00000636769 SETQ01105 290 aaPredicted RBP7.72□□□□□ -1.17
SCN2A-213ENST00000636769 HAP1P54257 671 aaPredicted RBP7.72□□□□□ -1.17
SCN2A-213ENST00000636769 NUDCQ9Y266 331 aa7.72□□□□□ -1.17
SCN2A-213ENST00000636769 PDE3BQ13370 1112 aa7.72□□□□□ -1.17
SCN2A-213ENST00000636769 CHIC2Q9UKJ5 165 aa7.72□□□□□ -1.17
SCN2A-213ENST00000636769 CALD1Q05682 793 aaKnown RBP7.71□□□□□ -1.17
SCN2A-213ENST00000636769 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.71□□□□□ -1.17
SCN2A-213ENST00000636769 RB1CC1Q8TDY2 1594 aa7.71□□□□□ -1.17
SCN2A-213ENST00000636769 RWDD1Q9H446 243 aaPredicted RBP7.71□□□□□ -1.18
SCN2A-213ENST00000636769 NACADO15069 1562 aa7.71□□□□□ -1.18
SCN2A-213ENST00000636769 KDM2AQ9Y2K7 1162 aa7.71□□□□□ -1.18
SCN2A-213ENST00000636769 RCAN3Q9UKA8 241 aa7.71□□□□□ -1.18
SCN2A-213ENST00000636769 MAPK8IP3Q9UPT6 1336 aa7.71□□□□□ -1.18
SCN2A-213ENST00000636769 CARD11Q9BXL7 1154 aa7.7□□□□□ -1.18
SCN2A-213ENST00000636769 A0A0U1RQG5 324 aaPredicted RBP7.69□□□□□ -1.18
SCN2A-213ENST00000636769 FRAT1Q92837 279 aaPredicted RBP7.69□□□□□ -1.18
SCN2A-213ENST00000636769 CEP164Q9UPV0 1460 aa7.69□□□□□ -1.18
SCN2A-213ENST00000636769 SLKQ9H2G2 1235 aaPredicted RBP7.69□□□□□ -1.18
SCN2A-213ENST00000636769 PRKCSHP14314 528 aaPredicted RBP7.69□□□□□ -1.18
SCN2A-213ENST00000636769 PMFBP1Q8TBY8 1022 aa7.69□□□□□ -1.18
SCN2A-213ENST00000636769 WRNQ14191 1432 aaPredicted RBP eCLIP7.69□□□□□ -1.18
SCN2A-213ENST00000636769 GZF1Q9H116 711 aaPredicted RBP7.69□□□□□ -1.18
SCN2A-213ENST00000636769 TPM4P67936 248 aa7.69□□□□□ -1.18
SCN2A-213ENST00000636769 RALBP1Q15311 655 aa7.68□□□□□ -1.18
SCN2A-213ENST00000636769 GPS2Q13227 327 aa7.68□□□□□ -1.18
SCN2A-213ENST00000636769 CALRP27797 417 aaKnown RBP7.68□□□□□ -1.18
SCN2A-213ENST00000636769 TPM2P07951 284 aa7.68□□□□□ -1.18
SCN2A-213ENST00000636769 CHGAP10645 457 aaKnown RBP7.68□□□□□ -1.18
SCN2A-213ENST00000636769 IPO8O15397 1037 aaKnown RBP7.67□□□□□ -1.18
SCN2A-213ENST00000636769 CCNB3Q8WWL7 1395 aa7.67□□□□□ -1.18
SCN2A-213ENST00000636769 FGD1P98174 961 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms