RNA–Protein interactions for RNA: ENST00000636769.1

SCN2A-213, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 8,573 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-213ENST00000636769 PELP1Q8IZL8 1130 aaKnown RBP10.06□□□□□ -0.8
SCN2A-213ENST00000636769 MYT1Q01538 1121 aa10.03□□□□□ -0.8
SCN2A-213ENST00000636769 NISCHQ9Y2I1 1504 aa9.77□□□□□ -0.85
SCN2A-213ENST00000636769 CENPBP07199 599 aaPredicted RBP9.61□□□□□ -0.87
SCN2A-213ENST00000636769 DCAF8L2P0C7V8 631 aa9.57□□□□□ -0.88
SCN2A-213ENST00000636769 ZEB1P37275 1124 aaPredicted RBP9.56□□□□□ -0.88
SCN2A-213ENST00000636769 CCER1Q8TC90 406 aaPredicted RBP9.55□□□□□ -0.88
SCN2A-213ENST00000636769 SUPT5HO00267 1087 aaKnown RBP9.53□□□□□ -0.88
SCN2A-213ENST00000636769 ERICH6Q7L0X2 663 aa9.49□□□□□ -0.89
SCN2A-213ENST00000636769 PCGF6Q9BYE7 350 aa9.35□□□□□ -0.91
SCN2A-213ENST00000636769 APLP2Q06481 763 aa9.29□□□□□ -0.92
SCN2A-213ENST00000636769 NEFLP07196 543 aa9.25□□□□□ -0.93
SCN2A-213ENST00000636769 TTBK1Q5TCY1 1321 aaPredicted RBP9.2□□□□□ -0.94
SCN2A-213ENST00000636769 YTHDC1Q96MU7 727 aaKnown RBP9.18□□□□□ -0.94
SCN2A-213ENST00000636769 HRCP23327 699 aa9.18□□□□□ -0.94
SCN2A-213ENST00000636769 SHROOM4Q9ULL8 1493 aa9.13□□□□□ -0.95
SCN2A-213ENST00000636769 TRIM26Q12899 539 aaPredicted RBP9.04□□□□□ -0.96
SCN2A-213ENST00000636769 EHMT2Q96KQ7 1210 aa9.03□□□□□ -0.96
SCN2A-213ENST00000636769 DAXXQ9UER7 740 aaPredicted RBP8.97□□□□□ -0.97
SCN2A-213ENST00000636769 RTL5Q5HYW3 569 aaPredicted RBP8.95□□□□□ -0.98
SCN2A-213ENST00000636769 FAM9AQ8IZU1 332 aaPredicted RBP8.94□□□□□ -0.98
SCN2A-213ENST00000636769 TRIM41Q8WV44 630 aa8.91□□□□□ -0.98
SCN2A-213ENST00000636769 MYT1LQ9UL68 1186 aa8.8□□□□□ -1
SCN2A-213ENST00000636769 DIEXFQ68CQ4 756 aaKnown RBP8.8□□□□□ -1
SCN2A-213ENST00000636769 CLSPNQ9HAW4 1339 aa8.79□□□□□ -1
SCN2A-213ENST00000636769 GTF3C3Q9Y5Q9 886 aa8.76□□□□□ -1.01
SCN2A-213ENST00000636769 ZNF316A6NFI3 1004 aaPredicted RBP8.75□□□□□ -1.01
SCN2A-213ENST00000636769 UBTFP17480 764 aaKnown RBP8.75□□□□□ -1.01
SCN2A-213ENST00000636769 ACIN1Q9UKV3 1341 aaKnown RBP8.72□□□□□ -1.01
SCN2A-213ENST00000636769 PPARGC1BQ86YN6 1023 aaKnown RBP8.72□□□□□ -1.01
SCN2A-213ENST00000636769 GLIPR1L2Q4G1C9 344 aa8.71□□□□□ -1.02
SCN2A-213ENST00000636769 CDK11AQ9UQ88 783 aaPredicted RBP8.69□□□□□ -1.02
SCN2A-213ENST00000636769 CHIC1Q5VXU3 224 aa8.64□□□□□ -1.03
SCN2A-213ENST00000636769 RANGAP1P46060 587 aaPredicted RBP8.59□□□□□ -1.03
SCN2A-213ENST00000636769 ANP32AP39687 249 aaKnown RBP8.57□□□□□ -1.04
SCN2A-213ENST00000636769 ATP1B4Q9UN42 357 aaPredicted RBP8.57□□□□□ -1.04
SCN2A-213ENST00000636769 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.55□□□□□ -1.04
SCN2A-213ENST00000636769 EIF5BO60841 1220 aaKnown RBP8.53□□□□□ -1.04
SCN2A-213ENST00000636769 HNRNPUL2Q1KMD3 747 aaKnown RBP8.52□□□□□ -1.05
SCN2A-213ENST00000636769 LOC105371045A0A1W2PR82 267 aa8.52□□□□□ -1.05
SCN2A-213ENST00000636769 ANP32CO43423 234 aa8.52□□□□□ -1.05
SCN2A-213ENST00000636769 BCANQ96GW7 911 aa8.51□□□□□ -1.05
SCN2A-213ENST00000636769 ANP32BQ92688 251 aaKnown RBP8.46□□□□□ -1.05
SCN2A-213ENST00000636769 POLR3GLQ9BT43 218 aa8.45□□□□□ -1.06
SCN2A-213ENST00000636769 ITGAEP38570 1179 aa8.43□□□□□ -1.06
SCN2A-213ENST00000636769 ANP32EQ9BTT0 268 aa8.42□□□□□ -1.06
SCN2A-213ENST00000636769 SCAF1Q9H7N4 1312 aaKnown RBP8.4□□□□□ -1.06
SCN2A-213ENST00000636769 NEUROD1Q13562 356 aa8.37□□□□□ -1.07
SCN2A-213ENST00000636769 DCAF1Q9Y4B6 1507 aa8.37□□□□□ -1.07
SCN2A-213ENST00000636769 ZBTB47Q9UFB7 747 aaPredicted RBP8.37□□□□□ -1.07
SCN2A-213ENST00000636769 FKBP8Q14318 412 aa8.36□□□□□ -1.07
SCN2A-213ENST00000636769 UPF2Q9HAU5 1272 aaKnown RBP8.32□□□□□ -1.08
SCN2A-213ENST00000636769 TNNT2P45379 298 aaPredicted RBP8.31□□□□□ -1.08
SCN2A-213ENST00000636769 ERICH6BQ5W0A0 696 aa8.3□□□□□ -1.08
SCN2A-213ENST00000636769 NPM2Q86SE8 214 aaKnown RBP8.3□□□□□ -1.08
SCN2A-213ENST00000636769 CNGB1Q14028 1251 aaPredicted RBP8.29□□□□□ -1.08
SCN2A-213ENST00000636769 CANXP27824 592 aaKnown RBP8.28□□□□□ -1.08
SCN2A-213ENST00000636769 BCL11AQ9H165 835 aa8.27□□□□□ -1.09
SCN2A-213ENST00000636769 DDRGK1Q96HY6 314 aa8.27□□□□□ -1.09
SCN2A-213ENST00000636769 NBR1Q14596 966 aa8.26□□□□□ -1.09
SCN2A-213ENST00000636769 FAM50AQ14320 339 aaKnown RBP8.25□□□□□ -1.09
SCN2A-213ENST00000636769 PPM1GO15355 546 aaPredicted RBP8.25□□□□□ -1.09
SCN2A-213ENST00000636769 CCDC136Q96JN2 1154 aa8.24□□□□□ -1.09
SCN2A-213ENST00000636769 HSP90AA1P07900 732 aaKnown RBP8.24□□□□□ -1.09
SCN2A-213ENST00000636769 TRIM52Q96A61 297 aa8.23□□□□□ -1.09
SCN2A-213ENST00000636769 HNRNPUQ00839 825 aaKnown RBP eCLIP8.22□□□□□ -1.09
SCN2A-213ENST00000636769 TRIM44Q96DX7 344 aaPredicted RBP8.22□□□□□ -1.09
SCN2A-213ENST00000636769 ABCC9O60706 1549 aa8.2□□□□□ -1.1
SCN2A-213ENST00000636769 NCLP19338 710 aaKnown RBP8.2□□□□□ -1.1
SCN2A-213ENST00000636769 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.2□□□□□ -1.1
SCN2A-213ENST00000636769 NEFMP07197 916 aa8.19□□□□□ -1.1
SCN2A-213ENST00000636769 SLC4A1APQ9BWU0 796 aaKnown RBP8.19□□□□□ -1.1
SCN2A-213ENST00000636769 BECN1Q14457 450 aa8.19□□□□□ -1.1
SCN2A-213ENST00000636769 ZCCHC6Q5VYS8 1495 aaKnown RBP8.15□□□□□ -1.1
SCN2A-213ENST00000636769 MIER1Q8N108 512 aa8.14□□□□□ -1.11
SCN2A-213ENST00000636769 TONSLQ96HA7 1378 aa8.14□□□□□ -1.11
SCN2A-213ENST00000636769 GOLGA6L22H0YM25 854 aa8.14□□□□□ -1.11
SCN2A-213ENST00000636769 NOP58Q9Y2X3 529 aaKnown RBP8.13□□□□□ -1.11
SCN2A-213ENST00000636769 CDK11BP21127 795 aaKnown RBP8.12□□□□□ -1.11
SCN2A-213ENST00000636769 DDX10Q13206 875 aaKnown RBP8.11□□□□□ -1.11
SCN2A-213ENST00000636769 NAP1L5Q96NT1 182 aaPredicted RBP8.11□□□□□ -1.11
SCN2A-213ENST00000636769 ZNF326Q5BKZ1 582 aaKnown RBP8.1□□□□□ -1.11
SCN2A-213ENST00000636769 CSRNP3Q8WYN3 585 aa8.09□□□□□ -1.11
SCN2A-213ENST00000636769 FAM9BQ8IZU0 186 aa8.08□□□□□ -1.12
SCN2A-213ENST00000636769 PPP4R2Q9NY27 417 aa8.08□□□□□ -1.12
SCN2A-213ENST00000636769 DEKP35659 375 aaKnown RBP8.08□□□□□ -1.12
SCN2A-213ENST00000636769 L1TD1Q5T7N2 865 aaKnown RBP8.08□□□□□ -1.12
SCN2A-213ENST00000636769 CCDC180Q9P1Z9 1646 aa8.07□□□□□ -1.12
SCN2A-213ENST00000636769 MRS2Q9HD23 443 aa8.07□□□□□ -1.12
SCN2A-213ENST00000636769 SUPT16HQ9Y5B9 1047 aaKnown RBP8.07□□□□□ -1.12
SCN2A-213ENST00000636769 TMC1Q8TDI8 760 aa8.06□□□□□ -1.12
SCN2A-213ENST00000636769 PABPN1Q86U42 306 aaKnown RBP eCLIP8.04□□□□□ -1.12
SCN2A-213ENST00000636769 ARXQ96QS3 562 aa8.04□□□□□ -1.12
SCN2A-213ENST00000636769 PTMAP06454 111 aaKnown RBP8.03□□□□□ -1.12
SCN2A-213ENST00000636769 DNTTIP2Q5QJE6 756 aaKnown RBP8.01□□□□□ -1.13
SCN2A-213ENST00000636769 RTN4Q9NQC3 1192 aaKnown RBP8.01□□□□□ -1.13
SCN2A-213ENST00000636769 RBM19Q9Y4C8 960 aaKnown RBP8□□□□□ -1.13
SCN2A-213ENST00000636769 WDR43Q15061 677 aaKnown RBP eCLIP7.99□□□□□ -1.13
SCN2A-213ENST00000636769 MYH16Q9H6N6 1097 aa7.99□□□□□ -1.13
SCN2A-213ENST00000636769 CHAF1AQ13111 956 aaPredicted RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms