RNA–Protein interactions for RNA: ENST00000636754.1

LGI1-222, Transcript of leucine rich glioma inactivated 1, human

TSL 5

Gene LGI1, Length 2,200 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LGI1-222	ENST00000636754	FBLN2	P98095	1184 aa		6.82	□□□□□ -1.32
LGI1-222	ENST00000636754	SCUBE2	Q9NQ36	999 aa		6.81	□□□□□ -1.32
LGI1-222	ENST00000636754	SSUH2	Q9Y2M2	353 aa		6.81	□□□□□ -1.32
LGI1-222	ENST00000636754	MMRN1	Q13201	1228 aa		6.81	□□□□□ -1.32
LGI1-222	ENST00000636754	EIF4G1	Q04637	1599 aa	Known RBP	6.81	□□□□□ -1.32
LGI1-222	ENST00000636754	RTN4	Q9NQC3	1192 aa	Known RBP	6.79	□□□□□ -1.32
LGI1-222	ENST00000636754	C7	P10643	843 aa		6.78	□□□□□ -1.32
LGI1-222	ENST00000636754	SLC39A7	Q92504	469 aa		6.78	□□□□□ -1.32
LGI1-222	ENST00000636754	PEG3	Q9GZU2	1588 aa		6.77	□□□□□ -1.33
LGI1-222	ENST00000636754	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	6.77	□□□□□ -1.33
LGI1-222	ENST00000636754	ZRANB1	Q9UGI0	708 aa		6.77	□□□□□ -1.33
LGI1-222	ENST00000636754	PABPN1	Q86U42	306 aa	Known RBP eCLIP	6.76	□□□□□ -1.33
LGI1-222	ENST00000636754	GALR2	O43603	387 aa	Predicted RBP	6.76	□□□□□ -1.33
LGI1-222	ENST00000636754	ZBTB22	O15209	634 aa		6.74	□□□□□ -1.33
LGI1-222	ENST00000636754	ZNF692	Q9BU19	519 aa	Predicted RBP	6.74	□□□□□ -1.33
LGI1-222	ENST00000636754	SMARCA4	P51532	1647 aa		6.74	□□□□□ -1.33
LGI1-222	ENST00000636754	METRN	Q9UJH8	293 aa		6.74	□□□□□ -1.33
LGI1-222	ENST00000636754	SMARCA2	P51531	1590 aa		6.74	□□□□□ -1.33
LGI1-222	ENST00000636754	HMGXB3	Q12766	1538 aa		6.73	□□□□□ -1.33
LGI1-222	ENST00000636754	CC2D2A	Q9P2K1	1620 aa		6.73	□□□□□ -1.33
LGI1-222	ENST00000636754	SPNS2	Q8IVW8	549 aa		6.73	□□□□□ -1.33
LGI1-222	ENST00000636754	AMER1	Q5JTC6	1135 aa	Predicted RBP	6.72	□□□□□ -1.33
LGI1-222	ENST00000636754	ATXN8OS	P0DMR3	200 aa		6.72	□□□□□ -1.33
LGI1-222	ENST00000636754	NCAPD3	P42695	1498 aa		6.71	□□□□□ -1.33
LGI1-222	ENST00000636754	POTEJ	P0CG39	1038 aa		6.71	□□□□□ -1.34
LGI1-222	ENST00000636754	PELP1	Q8IZL8	1130 aa	Known RBP	6.68	□□□□□ -1.34
LGI1-222	ENST00000636754	ASTL	Q6HA08	431 aa	Predicted RBP	6.68	□□□□□ -1.34
LGI1-222	ENST00000636754	CECR2	Q9BXF3	1484 aa		6.66	□□□□□ -1.34
LGI1-222	ENST00000636754	ATAD2B	Q9ULI0	1458 aa		6.66	□□□□□ -1.34
LGI1-222	ENST00000636754	PAK3	O75914	559 aa	Predicted RBP	6.65	□□□□□ -1.35
LGI1-222	ENST00000636754	MKRN4P	Q13434	485 aa	Predicted RBP	6.63	□□□□□ -1.35
LGI1-222	ENST00000636754	MROH2B	Q7Z745	1585 aa		6.62	□□□□□ -1.35
LGI1-222	ENST00000636754	ATMIN	O43313	823 aa	Predicted RBP	6.61	□□□□□ -1.35
LGI1-222	ENST00000636754	BAZ1B	Q9UIG0	1483 aa	Known RBP	6.6	□□□□□ -1.35
LGI1-222	ENST00000636754	TOP2A	P11388	1531 aa	Known RBP	6.59	□□□□□ -1.35
LGI1-222	ENST00000636754	RSF1	Q96T23	1441 aa	Predicted RBP	6.58	□□□□□ -1.36
LGI1-222	ENST00000636754	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	6.56	□□□□□ -1.36
LGI1-222	ENST00000636754	LAMC3	Q9Y6N6	1575 aa		6.55	□□□□□ -1.36
LGI1-222	ENST00000636754	WIZ	O95785	1651 aa		6.53	□□□□□ -1.36
LGI1-222	ENST00000636754	PHF12	Q96QT6	1004 aa		6.53	□□□□□ -1.36
LGI1-222	ENST00000636754	ST18	O60284	1047 aa		6.53	□□□□□ -1.36
LGI1-222	ENST00000636754	PRDM2	Q13029	1718 aa		6.51	□□□□□ -1.37
LGI1-222	ENST00000636754	CFTR	P13569	1480 aa		6.47	□□□□□ -1.37
LGI1-222	ENST00000636754	CADPS	Q9ULU8	1353 aa		6.46	□□□□□ -1.38
LGI1-222	ENST00000636754	PDS5B	Q9NTI5	1447 aa		6.46	□□□□□ -1.38
LGI1-222	ENST00000636754	MS4A3	Q96HJ5	214 aa		6.45	□□□□□ -1.38
LGI1-222	ENST00000636754	CREBZF	Q9NS37	354 aa		6.45	□□□□□ -1.38
LGI1-222	ENST00000636754	CUX2	O14529	1486 aa		6.44	□□□□□ -1.38
LGI1-222	ENST00000636754	SNPH	O15079	494 aa		6.44	□□□□□ -1.38
LGI1-222	ENST00000636754	NPM1	P06748	294 aa	Known RBP eCLIP	6.44	□□□□□ -1.38
LGI1-222	ENST00000636754	POTEF	A5A3E0	1075 aa		6.43	□□□□□ -1.38
LGI1-222	ENST00000636754	ATN1	P54259	1190 aa	Predicted RBP	6.42	□□□□□ -1.38
LGI1-222	ENST00000636754	CCDC88B	A6NC98	1476 aa		6.41	□□□□□ -1.38
LGI1-222	ENST00000636754	ABCC8	Q09428	1581 aa		6.41	□□□□□ -1.38
LGI1-222	ENST00000636754	THOC2	Q8NI27	1593 aa	Known RBP	6.41	□□□□□ -1.38
LGI1-222	ENST00000636754	STAG3	Q9UJ98	1225 aa		6.4	□□□□□ -1.38
LGI1-222	ENST00000636754	WDR62	O43379	1518 aa		6.4	□□□□□ -1.39
LGI1-222	ENST00000636754	FKBP8	Q14318	412 aa		6.4	□□□□□ -1.39
LGI1-222	ENST00000636754	SLAIN1	Q8ND83	568 aa		6.4	□□□□□ -1.39
LGI1-222	ENST00000636754	MRC2	Q9UBG0	1479 aa		6.38	□□□□□ -1.39
LGI1-222	ENST00000636754	WDR97	A6NE52	1622 aa		6.38	□□□□□ -1.39
LGI1-222	ENST00000636754	CEP164	Q9UPV0	1460 aa		6.38	□□□□□ -1.39
LGI1-222	ENST00000636754	ERCC6	Q03468	1493 aa		6.37	□□□□□ -1.39
LGI1-222	ENST00000636754	KIF21A	Q7Z4S6	1674 aa		6.37	□□□□□ -1.39
LGI1-222	ENST00000636754	FANCD2	Q9BXW9	1451 aa		6.37	□□□□□ -1.39
LGI1-222	ENST00000636754	IER5L	Q5T953	404 aa		6.36	□□□□□ -1.39
LGI1-222	ENST00000636754	SEC24B	O95487	1268 aa		6.35	□□□□□ -1.39
LGI1-222	ENST00000636754	TIE1	P35590	1138 aa		6.35	□□□□□ -1.39
LGI1-222	ENST00000636754	NES	P48681	1621 aa		6.35	□□□□□ -1.39
LGI1-222	ENST00000636754	DNMBP	Q6XZF7	1577 aa		6.34	□□□□□ -1.4
LGI1-222	ENST00000636754	BMP2K	Q9NSY1	1161 aa	Predicted RBP	6.31	□□□□□ -1.4
LGI1-222	ENST00000636754	KRTAP3-3	Q9BYR6	98 aa		6.3	□□□□□ -1.4
LGI1-222	ENST00000636754	KRTAP3-2	Q9BYR7	98 aa		6.3	□□□□□ -1.4
LGI1-222	ENST00000636754	BIVM-ERCC5	R4GMW8	1640 aa		6.29	□□□□□ -1.4
LGI1-222	ENST00000636754	IFT140	Q96RY7	1462 aa		6.29	□□□□□ -1.4
LGI1-222	ENST00000636754	URB2	Q14146	1524 aa	Known RBP	6.29	□□□□□ -1.4
LGI1-222	ENST00000636754	TOPBP1	Q92547	1522 aa		6.28	□□□□□ -1.4
LGI1-222	ENST00000636754	COLQ	Q9Y215	455 aa	Predicted RBP	6.28	□□□□□ -1.4
LGI1-222	ENST00000636754	RNF166	Q96A37	237 aa	Predicted RBP	6.26	□□□□□ -1.41
LGI1-222	ENST00000636754	TOP2B	Q02880	1626 aa		6.26	□□□□□ -1.41
LGI1-222	ENST00000636754	TARBP1	Q13395	1621 aa	Known RBP	6.24	□□□□□ -1.41
LGI1-222	ENST00000636754	EMP3	P54852	163 aa		6.24	□□□□□ -1.41
LGI1-222	ENST00000636754	CUX1	P39880	1505 aa		6.23	□□□□□ -1.41
LGI1-222	ENST00000636754	MARVELD3	Q96A59	401 aa		6.23	□□□□□ -1.41
LGI1-222	ENST00000636754	SUPT5H	O00267	1087 aa	Known RBP	6.22	□□□□□ -1.41
LGI1-222	ENST00000636754	POLA1	P09884	1462 aa	Predicted RBP	6.22	□□□□□ -1.41
LGI1-222	ENST00000636754	WRN	Q14191	1432 aa	Predicted RBP eCLIP	6.21	□□□□□ -1.41
LGI1-222	ENST00000636754	ABCA10	Q8WWZ4	1543 aa		6.21	□□□□□ -1.41
LGI1-222	ENST00000636754	MNX1	P50219	401 aa	Predicted RBP	6.21	□□□□□ -1.42
LGI1-222	ENST00000636754	KIF12	Q96FN5	646 aa		6.21	□□□□□ -1.42
LGI1-222	ENST00000636754	HS3ST6	Q96QI5	342 aa		6.21	□□□□□ -1.42
LGI1-222	ENST00000636754	PLCB2	Q00722	1185 aa		6.2	□□□□□ -1.42
LGI1-222	ENST00000636754	FGD5	Q6ZNL6	1462 aa		6.2	□□□□□ -1.42
LGI1-222	ENST00000636754	ABCA5	Q8WWZ7	1642 aa		6.2	□□□□□ -1.42
LGI1-222	ENST00000636754	PRKCSH	P14314	528 aa	Predicted RBP	6.19	□□□□□ -1.42
LGI1-222	ENST00000636754	SPDYE4	A6NLX3	237 aa		6.19	□□□□□ -1.42
LGI1-222	ENST00000636754	TSPYL2	Q9H2G4	693 aa	Predicted RBP	6.19	□□□□□ -1.42
LGI1-222	ENST00000636754	PTGER2	P43116	358 aa		6.18	□□□□□ -1.42
LGI1-222	ENST00000636754	SYNJ1	O43426	1573 aa		6.18	□□□□□ -1.42
LGI1-222	ENST00000636754	EIF4G3	O43432	1585 aa	Known RBP	6.18	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms