RNA–Protein interactions for RNA: ENST00000636681.1

CLN5-213, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 1,791 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-213ENST00000636681 RANGAP1P46060 587 aaPredicted RBP17.35■□□□□ 0.37
CLN5-213ENST00000636681 TNIKQ9UKE5 1360 aa17.28■□□□□ 0.36
CLN5-213ENST00000636681 NUP160Q12769 1436 aa17.28■□□□□ 0.36
CLN5-213ENST00000636681 IQGAP2Q13576 1575 aa17.24■□□□□ 0.35
CLN5-213ENST00000636681 CEP162Q5TB80 1403 aa17.22■□□□□ 0.35
CLN5-213ENST00000636681 KIAA0586Q9BVV6 1533 aa17.22■□□□□ 0.35
CLN5-213ENST00000636681 CLASP1Q7Z460 1538 aa17.21■□□□□ 0.35
CLN5-213ENST00000636681 P3H3Q8IVL6 736 aa17.18■□□□□ 0.34
CLN5-213ENST00000636681 OSCARQ8IYS5 282 aa17.17■□□□□ 0.34
CLN5-213ENST00000636681 CLIP1P30622 1438 aa17.16■□□□□ 0.34
CLN5-213ENST00000636681 ERCC6L2Q5T890 1561 aa17.16■□□□□ 0.34
CLN5-213ENST00000636681 ARHGAP35Q9NRY4 1499 aa17.15■□□□□ 0.34
CLN5-213ENST00000636681 SHROOM2Q13796 1616 aa17.14■□□□□ 0.33
CLN5-213ENST00000636681 JPH4Q96JJ6 628 aa17.14■□□□□ 0.33
CLN5-213ENST00000636681 UGGT2Q9NYU1 1516 aa17.13■□□□□ 0.33
CLN5-213ENST00000636681 SAMD9Q5K651 1589 aa17.12■□□□□ 0.33
CLN5-213ENST00000636681 DISP1Q96F81 1524 aa17.12■□□□□ 0.33
CLN5-213ENST00000636681 FHOD3Q2V2M9 1422 aa17.1■□□□□ 0.33
CLN5-213ENST00000636681 ARAP1Q96P48 1450 aa17.1■□□□□ 0.33
CLN5-213ENST00000636681 KIAA0556O60303 1618 aa17.09■□□□□ 0.33
CLN5-213ENST00000636681 TTBK1Q5TCY1 1321 aaPredicted RBP17.09■□□□□ 0.33
CLN5-213ENST00000636681 PRG4Q92954 1404 aaPredicted RBP17.09■□□□□ 0.33
CLN5-213ENST00000636681 EFCAB5A4FU69 1503 aa17.05■□□□□ 0.32
CLN5-213ENST00000636681 CARMIL2Q6F5E8 1435 aa16.98■□□□□ 0.31
CLN5-213ENST00000636681 ARHGEF11O15085 1522 aa16.96■□□□□ 0.31
CLN5-213ENST00000636681 PCF11O94913 1555 aaKnown RBP16.96■□□□□ 0.3
CLN5-213ENST00000636681 RIMBP3CA6NJZ7 1639 aa16.95■□□□□ 0.3
CLN5-213ENST00000636681 RIMBP3BA6NNM3 1639 aa16.95■□□□□ 0.3
CLN5-213ENST00000636681 RIMBP3Q9UFD9 1639 aa16.95■□□□□ 0.3
CLN5-213ENST00000636681 LRRIQ1Q96JM4 1722 aa16.95■□□□□ 0.3
CLN5-213ENST00000636681 VPS8Q8N3P4 1428 aa16.94■□□□□ 0.3
CLN5-213ENST00000636681 PLB1Q6P1J6 1458 aa16.92■□□□□ 0.3
CLN5-213ENST00000636681 PTPRGP23470 1445 aa16.9■□□□□ 0.3
CLN5-213ENST00000636681 ARID3CA6NKF2 412 aa16.9■□□□□ 0.3
CLN5-213ENST00000636681 ATP1B4Q9UN42 357 aaPredicted RBP16.89■□□□□ 0.3
CLN5-213ENST00000636681 RAPGEF6Q8TEU7 1601 aa16.88■□□□□ 0.29
CLN5-213ENST00000636681 FMN1Q68DA7 1419 aa16.88■□□□□ 0.29
CLN5-213ENST00000636681 PPARGC1BQ86YN6 1023 aaKnown RBP16.87■□□□□ 0.29
CLN5-213ENST00000636681 ABCA8O94911 1581 aa16.86■□□□□ 0.29
CLN5-213ENST00000636681 CASKIN1Q8WXD9 1431 aa16.84■□□□□ 0.29
CLN5-213ENST00000636681 NUP153P49790 1475 aaKnown RBP16.83■□□□□ 0.28
CLN5-213ENST00000636681 CDK13Q14004 1512 aaKnown RBP16.82■□□□□ 0.28
CLN5-213ENST00000636681 ADCY10Q96PN6 1610 aa16.82■□□□□ 0.28
CLN5-213ENST00000636681 FYCO1Q9BQS8 1478 aa16.81■□□□□ 0.28
CLN5-213ENST00000636681 CYB5RLQ6IPT4 315 aa16.81■□□□□ 0.28
CLN5-213ENST00000636681 HECW1Q76N89 1606 aa16.81■□□□□ 0.28
CLN5-213ENST00000636681 UACAQ9BZF9 1416 aa16.79■□□□□ 0.28
CLN5-213ENST00000636681 ABCC2Q92887 1545 aa16.78■□□□□ 0.28
CLN5-213ENST00000636681 EPRSP07814 1512 aaKnown RBP16.77■□□□□ 0.28
CLN5-213ENST00000636681 CFAP43Q8NDM7 1665 aa16.77■□□□□ 0.28
CLN5-213ENST00000636681 KANK4Q5T7N3 995 aaPredicted RBP16.76■□□□□ 0.27
CLN5-213ENST00000636681 DNAJC5Q9H3Z4 198 aa16.76■□□□□ 0.27
CLN5-213ENST00000636681 TIAM1Q13009 1591 aa16.75■□□□□ 0.27
CLN5-213ENST00000636681 MAGI3Q5TCQ9 1506 aa16.74■□□□□ 0.27
CLN5-213ENST00000636681 ATP10BO94823 1461 aa16.74■□□□□ 0.27
CLN5-213ENST00000636681 ZCCHC11Q5TAX3 1644 aaKnown RBP16.74■□□□□ 0.27
CLN5-213ENST00000636681 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.72■□□□□ 0.27
CLN5-213ENST00000636681 HNRNPUL2Q1KMD3 747 aaKnown RBP16.72■□□□□ 0.27
CLN5-213ENST00000636681 UHRF1BP1LA0JNW5 1464 aa16.71■□□□□ 0.27
CLN5-213ENST00000636681 APLP2Q06481 763 aa16.68■□□□□ 0.26
CLN5-213ENST00000636681 CCDC18Q5T9S5 1454 aa16.68■□□□□ 0.26
CLN5-213ENST00000636681 KDM5BQ9UGL1 1544 aa16.68■□□□□ 0.26
CLN5-213ENST00000636681 LRRC9Q6ZRR7 1453 aa16.65■□□□□ 0.26
CLN5-213ENST00000636681 MAP3K1Q13233 1512 aa16.65■□□□□ 0.26
CLN5-213ENST00000636681 KIF14Q15058 1648 aa16.63■□□□□ 0.25
CLN5-213ENST00000636681 MTUS2Q5JR59 1369 aa16.61■□□□□ 0.25
CLN5-213ENST00000636681 EHBP1L1Q8N3D4 1523 aa16.59■□□□□ 0.25
CLN5-213ENST00000636681 ASXL2Q76L83 1435 aa16.58■□□□□ 0.24
CLN5-213ENST00000636681 KCNH8Q96L42 1107 aa16.57■□□□□ 0.24
CLN5-213ENST00000636681 TROQ12816 1431 aaPredicted RBP16.57■□□□□ 0.24
CLN5-213ENST00000636681 PLEKHD1A6NEE1 506 aa16.56■□□□□ 0.24
CLN5-213ENST00000636681 NPM1P06748 294 aaKnown RBP eCLIP16.56■□□□□ 0.24
CLN5-213ENST00000636681 SUPT6HQ7KZ85 1726 aaKnown RBP16.56■□□□□ 0.24
CLN5-213ENST00000636681 NCOA2Q15596 1464 aa16.54■□□□□ 0.24
CLN5-213ENST00000636681 WDR7Q9Y4E6 1490 aa16.53■□□□□ 0.24
CLN5-213ENST00000636681 CDK11AQ9UQ88 783 aaPredicted RBP16.53■□□□□ 0.24
CLN5-213ENST00000636681 TTC37Q6PGP7 1564 aa16.53■□□□□ 0.24
CLN5-213ENST00000636681 PHLDB1Q86UU1 1377 aa16.53■□□□□ 0.24
CLN5-213ENST00000636681 MAPKBP1O60336 1514 aa16.5■□□□□ 0.23
CLN5-213ENST00000636681 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.5■□□□□ 0.23
CLN5-213ENST00000636681 CDC42BPAQ5VT25 1732 aa16.5■□□□□ 0.23
CLN5-213ENST00000636681 ABCC10Q5T3U5 1492 aa16.49■□□□□ 0.23
CLN5-213ENST00000636681 KIF13AQ9H1H9 1805 aa16.47■□□□□ 0.23
CLN5-213ENST00000636681 CDC42BPBQ9Y5S2 1711 aa16.46■□□□□ 0.23
CLN5-213ENST00000636681 MYO5CQ9NQX4 1742 aa16.44■□□□□ 0.22
CLN5-213ENST00000636681 DIP2BQ9P265 1576 aa16.44■□□□□ 0.22
CLN5-213ENST00000636681 ABCA9Q8IUA7 1624 aa16.43■□□□□ 0.22
CLN5-213ENST00000636681 TSPOAP1O95153 1857 aa16.43■□□□□ 0.22
CLN5-213ENST00000636681 GPATCH8Q9UKJ3 1502 aaKnown RBP16.43■□□□□ 0.22
CLN5-213ENST00000636681 CCNB3Q8WWL7 1395 aa16.42■□□□□ 0.22
CLN5-213ENST00000636681 MYOM3Q5VTT5 1437 aa16.41■□□□□ 0.22
CLN5-213ENST00000636681 PREX2Q70Z35 1606 aa16.41■□□□□ 0.22
CLN5-213ENST00000636681 ITSN2Q9NZM3 1697 aa16.4■□□□□ 0.22
CLN5-213ENST00000636681 ZNF644Q9H582 1327 aaPredicted RBP16.4■□□□□ 0.22
CLN5-213ENST00000636681 FGD6Q6ZV73 1430 aa16.39■□□□□ 0.21
CLN5-213ENST00000636681 FAM69CQ0P6D2 419 aa16.38■□□□□ 0.21
CLN5-213ENST00000636681 PTPN23Q9H3S7 1636 aa16.38■□□□□ 0.21
CLN5-213ENST00000636681 MAP3K4Q9Y6R4 1608 aa16.38■□□□□ 0.21
CLN5-213ENST00000636681 ZNF777Q9ULD5 760 aaPredicted RBP16.37■□□□□ 0.21
CLN5-213ENST00000636681 PPRC1Q5VV67 1664 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms