RNA–Protein interactions for RNA: ENST00000636662.2

SCN2A-212, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 9,456 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-212ENST00000636662 PODXL2Q9NZ53 605 aa7.37□□□□□ -1.23
SCN2A-212ENST00000636662 PLCB2Q00722 1185 aa7.37□□□□□ -1.23
SCN2A-212ENST00000636662 HNRNPUL2Q1KMD3 747 aaKnown RBP7.37□□□□□ -1.23
SCN2A-212ENST00000636662 ZRSR1Q15695 479 aaKnown RBP7.35□□□□□ -1.23
SCN2A-212ENST00000636662 CHAF1AQ13111 956 aaPredicted RBP7.35□□□□□ -1.23
SCN2A-212ENST00000636662 RBM19Q9Y4C8 960 aaKnown RBP7.35□□□□□ -1.23
SCN2A-212ENST00000636662 PPP4R2Q9NY27 417 aa7.34□□□□□ -1.23
SCN2A-212ENST00000636662 ZBTB7CA1YPR0 619 aa7.33□□□□□ -1.24
SCN2A-212ENST00000636662 LAS1LQ9Y4W2 734 aaKnown RBP7.33□□□□□ -1.24
SCN2A-212ENST00000636662 HSP90AA2PQ14568 343 aaPredicted RBP7.33□□□□□ -1.24
SCN2A-212ENST00000636662 SETQ01105 290 aaPredicted RBP7.33□□□□□ -1.24
SCN2A-212ENST00000636662 TAF7LQ5H9L4 462 aa7.33□□□□□ -1.24
SCN2A-212ENST00000636662 VSIG10Q8N0Z9 540 aa7.33□□□□□ -1.24
SCN2A-212ENST00000636662 CCDC136Q96JN2 1154 aa7.33□□□□□ -1.24
SCN2A-212ENST00000636662 TSHZ2Q9NRE2 1034 aa7.32□□□□□ -1.24
SCN2A-212ENST00000636662 MTERF4Q7Z6M4 381 aaKnown RBP7.32□□□□□ -1.24
SCN2A-212ENST00000636662 STK11IPQ8N1F8 1099 aa7.31□□□□□ -1.24
SCN2A-212ENST00000636662 MSNP26038 577 aaKnown RBP7.31□□□□□ -1.24
SCN2A-212ENST00000636662 MAP7D2Q96T17 732 aa7.31□□□□□ -1.24
SCN2A-212ENST00000636662 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.31□□□□□ -1.24
SCN2A-212ENST00000636662 NOC3LQ8WTT2 800 aaKnown RBP7.3□□□□□ -1.24
SCN2A-212ENST00000636662 MIER1Q8N108 512 aa7.3□□□□□ -1.24
SCN2A-212ENST00000636662 PRM3Q9NNZ6 103 aa7.29□□□□□ -1.24
SCN2A-212ENST00000636662 PATL2C9JE40 543 aaKnown RBP7.29□□□□□ -1.24
SCN2A-212ENST00000636662 GOLGA6L6A8MZA4 724 aa7.28□□□□□ -1.24
SCN2A-212ENST00000636662 CCER2I3L3R5 266 aa7.28□□□□□ -1.24
SCN2A-212ENST00000636662 GOLGA6L1Q8N7Z2 621 aa7.28□□□□□ -1.24
SCN2A-212ENST00000636662 PNNQ9H307 717 aaKnown RBP7.28□□□□□ -1.24
SCN2A-212ENST00000636662 EEA1Q15075 1411 aa7.28□□□□□ -1.24
SCN2A-212ENST00000636662 HAP1P54257 671 aaPredicted RBP7.26□□□□□ -1.25
SCN2A-212ENST00000636662 TIMELESSQ9UNS1 1208 aa7.25□□□□□ -1.25
SCN2A-212ENST00000636662 HNRNPUQ00839 825 aaKnown RBP eCLIP7.25□□□□□ -1.25
SCN2A-212ENST00000636662 NRDCO43847 1150 aa7.24□□□□□ -1.25
SCN2A-212ENST00000636662 DRC7Q8IY82 874 aa7.24□□□□□ -1.25
SCN2A-212ENST00000636662 FBXO3Q9UK99 471 aa7.24□□□□□ -1.25
SCN2A-212ENST00000636662 RRP9O43818 475 aaKnown RBP7.23□□□□□ -1.25
SCN2A-212ENST00000636662 TAF3Q5VWG9 929 aa7.23□□□□□ -1.25
SCN2A-212ENST00000636662 SALL2Q9Y467 1007 aaPredicted RBP7.23□□□□□ -1.25
SCN2A-212ENST00000636662 TAOK2Q9UL54 1235 aa7.23□□□□□ -1.25
SCN2A-212ENST00000636662 IPO9Q96P70 1041 aaKnown RBP7.22□□□□□ -1.25
SCN2A-212ENST00000636662 GOLGA6L3A6NEY3 463 aa7.2□□□□□ -1.26
SCN2A-212ENST00000636662 IRX6P78412 446 aaPredicted RBP7.2□□□□□ -1.26
SCN2A-212ENST00000636662 ZNF771Q7L3S4 317 aaPredicted RBP7.2□□□□□ -1.26
SCN2A-212ENST00000636662 CFAP44Q96MT7 982 aa7.2□□□□□ -1.26
SCN2A-212ENST00000636662 TONSLQ96HA7 1378 aa7.19□□□□□ -1.26
SCN2A-212ENST00000636662 TCERG1O14776 1098 aaKnown RBP7.19□□□□□ -1.26
SCN2A-212ENST00000636662 MYO15BQ96JP2 1530 aa7.19□□□□□ -1.26
SCN2A-212ENST00000636662 GOLGA6L4A6NEF3 574 aa7.19□□□□□ -1.26
SCN2A-212ENST00000636662 RRP12Q5JTH9 1297 aaKnown RBP7.19□□□□□ -1.26
SCN2A-212ENST00000636662 CLSTN1O94985 981 aa7.19□□□□□ -1.26
SCN2A-212ENST00000636662 PDE4CQ08493 712 aa7.18□□□□□ -1.26
SCN2A-212ENST00000636662 TRIM52Q96A61 297 aa7.18□□□□□ -1.26
SCN2A-212ENST00000636662 TPM2P07951 284 aa7.17□□□□□ -1.26
SCN2A-212ENST00000636662 FAM43AQ8N2R8 423 aa7.17□□□□□ -1.26
SCN2A-212ENST00000636662 ZNF526Q8TF50 670 aaPredicted RBP7.17□□□□□ -1.26
SCN2A-212ENST00000636662 KIAA2012Q0VF49 1180 aa7.17□□□□□ -1.26
SCN2A-212ENST00000636662 GSE1Q14687 1217 aa7.16□□□□□ -1.26
SCN2A-212ENST00000636662 ZCCHC6Q5VYS8 1495 aaKnown RBP7.16□□□□□ -1.26
SCN2A-212ENST00000636662 NEFHP12036 1026 aa7.16□□□□□ -1.26
SCN2A-212ENST00000636662 ISY1Q9ULR0 285 aaKnown RBP7.15□□□□□ -1.27
SCN2A-212ENST00000636662 FAM9BQ8IZU0 186 aa7.15□□□□□ -1.27
SCN2A-212ENST00000636662 MYH16Q9H6N6 1097 aa7.14□□□□□ -1.27
SCN2A-212ENST00000636662 HMGB1P09429 215 aaKnown RBP7.13□□□□□ -1.27
SCN2A-212ENST00000636662 CSPP1Q1MSJ5 1256 aa7.13□□□□□ -1.27
SCN2A-212ENST00000636662 PLCD4Q9BRC7 762 aa7.13□□□□□ -1.27
SCN2A-212ENST00000636662 FAM50AQ14320 339 aaKnown RBP7.12□□□□□ -1.27
SCN2A-212ENST00000636662 HSP90AB1P08238 724 aaKnown RBP7.12□□□□□ -1.27
SCN2A-212ENST00000636662 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.12□□□□□ -1.27
SCN2A-212ENST00000636662 ANO8Q9HCE9 1232 aaPredicted RBP7.11□□□□□ -1.27
SCN2A-212ENST00000636662 MS4A1P11836 297 aa7.11□□□□□ -1.27
SCN2A-212ENST00000636662 GBP4Q96PP9 640 aa7.1□□□□□ -1.27
SCN2A-212ENST00000636662 DDX10Q13206 875 aaKnown RBP7.1□□□□□ -1.27
SCN2A-212ENST00000636662 TSPYL1Q9H0U9 437 aa7.1□□□□□ -1.27
SCN2A-212ENST00000636662 CCDC66A2RUB6 948 aa7.09□□□□□ -1.27
SCN2A-212ENST00000636662 SKOR2Q2VWA4 1001 aaPredicted RBP7.09□□□□□ -1.27
SCN2A-212ENST00000636662 GOLGA3Q08378 1498 aa7.09□□□□□ -1.27
SCN2A-212ENST00000636662 CHMP4BQ9H444 224 aaKnown RBP7.09□□□□□ -1.28
SCN2A-212ENST00000636662 DDX11L8A8MPP1 907 aa7.08□□□□□ -1.28
SCN2A-212ENST00000636662 CASC1Q6TDU7 716 aa7.08□□□□□ -1.28
SCN2A-212ENST00000636662 MRS2Q9HD23 443 aa7.08□□□□□ -1.28
SCN2A-212ENST00000636662 TMC1Q8TDI8 760 aa7.08□□□□□ -1.28
SCN2A-212ENST00000636662 BCCIPQ9P287 314 aaKnown RBP eCLIP7.08□□□□□ -1.28
SCN2A-212ENST00000636662 NAP1L2Q9ULW6 460 aaPredicted RBP7.08□□□□□ -1.28
SCN2A-212ENST00000636662 HSP90AB3PQ58FF7 597 aa7.08□□□□□ -1.28
SCN2A-212ENST00000636662 NOM1Q5C9Z4 860 aaKnown RBP7.07□□□□□ -1.28
SCN2A-212ENST00000636662 GZF1Q9H116 711 aaPredicted RBP7.07□□□□□ -1.28
SCN2A-212ENST00000636662 TNIKQ9UKE5 1360 aa7.07□□□□□ -1.28
SCN2A-212ENST00000636662 SPRYD3Q8NCJ5 442 aa7.07□□□□□ -1.28
SCN2A-212ENST00000636662 HTATSF1O43719 755 aaKnown RBP7.06□□□□□ -1.28
SCN2A-212ENST00000636662 SYAP1Q96A49 352 aaPredicted RBP7.06□□□□□ -1.28
SCN2A-212ENST00000636662 WRNQ14191 1432 aaPredicted RBP eCLIP7.06□□□□□ -1.28
SCN2A-212ENST00000636662 RDXP35241 583 aaKnown RBP7.06□□□□□ -1.28
SCN2A-212ENST00000636662 MAPK8IP2Q13387 824 aaPredicted RBP7.05□□□□□ -1.28
SCN2A-212ENST00000636662 EIF4G2P78344 907 aaKnown RBP eCLIP7.05□□□□□ -1.28
SCN2A-212ENST00000636662 CEP162Q5TB80 1403 aa7.04□□□□□ -1.28
SCN2A-212ENST00000636662 WDR43Q15061 677 aaKnown RBP eCLIP7.04□□□□□ -1.28
SCN2A-212ENST00000636662 PHF14O94880 888 aa7.04□□□□□ -1.28
SCN2A-212ENST00000636662 TEX35Q5T0J7 233 aa7.04□□□□□ -1.28
SCN2A-212ENST00000636662 RB1CC1Q8TDY2 1594 aa7.04□□□□□ -1.28
SCN2A-212ENST00000636662 FGD1P98174 961 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms