RNA–Protein interactions for RNA: ENST00000635857.1

LIN28B-202, Transcript of lin-28 homolog B, humanhuman

TSL 5

Gene LIN28B, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-202ENST00000635857 KIAA0586Q9BVV6 1533 aa28.53■■■□□ 2.16
LIN28B-202ENST00000635857 JPH4Q96JJ6 628 aa28.49■■■□□ 2.15
LIN28B-202ENST00000635857 EEA1Q15075 1411 aa28.49■■■□□ 2.15
LIN28B-202ENST00000635857 PRG4Q92954 1404 aaPredicted RBP28.47■■■□□ 2.15
LIN28B-202ENST00000635857 CHIC1Q5VXU3 224 aa28.47■■■□□ 2.15
LIN28B-202ENST00000635857 ERCC6L2Q5T890 1561 aa28.45■■■□□ 2.15
LIN28B-202ENST00000635857 IQGAP2Q13576 1575 aa28.42■■■□□ 2.14
LIN28B-202ENST00000635857 CSRNP3Q8WYN3 585 aa28.38■■■□□ 2.13
LIN28B-202ENST00000635857 PRXQ9BXM0 1461 aa28.38■■■□□ 2.13
LIN28B-202ENST00000635857 CTTNBP2Q8WZ74 1663 aa28.35■■■□□ 2.13
LIN28B-202ENST00000635857 FAM9AQ8IZU1 332 aaPredicted RBP28.31■■■□□ 2.12
LIN28B-202ENST00000635857 CARMIL2Q6F5E8 1435 aa28.31■■■□□ 2.12
LIN28B-202ENST00000635857 UGGT2Q9NYU1 1516 aa28.21■■■□□ 2.11
LIN28B-202ENST00000635857 KIF21BO75037 1637 aa28.17■■■□□ 2.1
LIN28B-202ENST00000635857 TNIKQ9UKE5 1360 aa28.16■■■□□ 2.1
LIN28B-202ENST00000635857 PTPRGP23470 1445 aa28.14■■■□□ 2.1
LIN28B-202ENST00000635857 GOLGA3Q08378 1498 aa28.14■■■□□ 2.09
LIN28B-202ENST00000635857 KIAA0556O60303 1618 aa28.14■■■□□ 2.09
LIN28B-202ENST00000635857 DISP1Q96F81 1524 aa28.13■■■□□ 2.09
LIN28B-202ENST00000635857 TTBK1Q5TCY1 1321 aaPredicted RBP28.13■■■□□ 2.09
LIN28B-202ENST00000635857 TRHP20396 242 aaPredicted RBP28.12■■■□□ 2.09
LIN28B-202ENST00000635857 NPM1P06748 294 aaKnown RBP eCLIP28.08■■■□□ 2.09
LIN28B-202ENST00000635857 ADCY10Q96PN6 1610 aa28.04■■■□□ 2.08
LIN28B-202ENST00000635857 UBTFP17480 764 aaKnown RBP27.96■■■□□ 2.07
LIN28B-202ENST00000635857 EHMT2Q96KQ7 1210 aa27.96■■■□□ 2.07
LIN28B-202ENST00000635857 UACAQ9BZF9 1416 aa27.95■■■□□ 2.07
LIN28B-202ENST00000635857 ABCC2Q92887 1545 aa27.92■■■□□ 2.06
LIN28B-202ENST00000635857 SAMD9Q5K651 1589 aa27.91■■■□□ 2.06
LIN28B-202ENST00000635857 UHRF1BP1LA0JNW5 1464 aa27.91■■■□□ 2.06
LIN28B-202ENST00000635857 RANGAP1P46060 587 aaPredicted RBP27.91■■■□□ 2.06
LIN28B-202ENST00000635857 MAPKBP1O60336 1514 aa27.89■■■□□ 2.06
LIN28B-202ENST00000635857 P3H3Q8IVL6 736 aa27.87■■■□□ 2.05
LIN28B-202ENST00000635857 EFCAB5A4FU69 1503 aa27.84■■■□□ 2.05
LIN28B-202ENST00000635857 PLB1Q6P1J6 1458 aa27.81■■■□□ 2.04
LIN28B-202ENST00000635857 ABCA8O94911 1581 aa27.77■■■□□ 2.04
LIN28B-202ENST00000635857 KDM5BQ9UGL1 1544 aa27.77■■■□□ 2.04
LIN28B-202ENST00000635857 KIF13AQ9H1H9 1805 aa27.76■■■□□ 2.04
LIN28B-202ENST00000635857 ZCCHC11Q5TAX3 1644 aaKnown RBP27.76■■■□□ 2.03
LIN28B-202ENST00000635857 ABCC10Q5T3U5 1492 aa27.75■■■□□ 2.03
LIN28B-202ENST00000635857 FHOD3Q2V2M9 1422 aa27.74■■■□□ 2.03
LIN28B-202ENST00000635857 DIP2BQ9P265 1576 aa27.72■■■□□ 2.03
LIN28B-202ENST00000635857 FAM69CQ0P6D2 419 aa27.71■■■□□ 2.03
LIN28B-202ENST00000635857 ASXL2Q76L83 1435 aa27.71■■■□□ 2.03
LIN28B-202ENST00000635857 RAPGEF6Q8TEU7 1601 aa27.7■■■□□ 2.02
LIN28B-202ENST00000635857 ARHGAP35Q9NRY4 1499 aa27.6■■■□□ 2.01
LIN28B-202ENST00000635857 WDR7Q9Y4E6 1490 aa27.59■■■□□ 2.01
LIN28B-202ENST00000635857 FMN1Q68DA7 1419 aa27.58■■■□□ 2.01
LIN28B-202ENST00000635857 ARID3CA6NKF2 412 aa27.57■■■□□ 2
LIN28B-202ENST00000635857 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.56■■■□□ 2
LIN28B-202ENST00000635857 HNRNPUL2Q1KMD3 747 aaKnown RBP27.56■■■□□ 2
LIN28B-202ENST00000635857 GLI2P10070 1586 aa27.56■■■□□ 2
LIN28B-202ENST00000635857 TSPOAP1O95153 1857 aa27.54■■■□□ 2
LIN28B-202ENST00000635857 EPRSP07814 1512 aaKnown RBP27.54■■■□□ 2
LIN28B-202ENST00000635857 ATP10BO94823 1461 aa27.52■■■□□ 2
LIN28B-202ENST00000635857 NUP153P49790 1475 aaKnown RBP27.52■■■□□ 2
LIN28B-202ENST00000635857 CLIP1P30622 1438 aa27.49■■□□□ 1.99
LIN28B-202ENST00000635857 HECW1Q76N89 1606 aa27.49■■□□□ 1.99
LIN28B-202ENST00000635857 KCNH8Q96L42 1107 aa27.46■■□□□ 1.99
LIN28B-202ENST00000635857 ATP1B4Q9UN42 357 aaPredicted RBP27.46■■□□□ 1.99
LIN28B-202ENST00000635857 MAP3K4Q9Y6R4 1608 aa27.44■■□□□ 1.98
LIN28B-202ENST00000635857 CFAP43Q8NDM7 1665 aa27.41■■□□□ 1.98
LIN28B-202ENST00000635857 TEX14Q8IWB6 1497 aa27.39■■□□□ 1.98
LIN28B-202ENST00000635857 PLEKHD1A6NEE1 506 aa27.38■■□□□ 1.97
LIN28B-202ENST00000635857 CEP162Q5TB80 1403 aa27.35■■□□□ 1.97
LIN28B-202ENST00000635857 KDM6BO15054 1643 aa27.35■■□□□ 1.97
LIN28B-202ENST00000635857 PPRC1Q5VV67 1664 aaKnown RBP27.35■■□□□ 1.97
LIN28B-202ENST00000635857 CDK13Q14004 1512 aaKnown RBP27.35■■□□□ 1.97
LIN28B-202ENST00000635857 CD109Q6YHK3 1445 aa27.33■■□□□ 1.97
LIN28B-202ENST00000635857 PCF11O94913 1555 aaKnown RBP27.33■■□□□ 1.97
LIN28B-202ENST00000635857 CDK11AQ9UQ88 783 aaPredicted RBP27.31■■□□□ 1.96
LIN28B-202ENST00000635857 CASKIN1Q8WXD9 1431 aa27.31■■□□□ 1.96
LIN28B-202ENST00000635857 ABCA9Q8IUA7 1624 aa27.3■■□□□ 1.96
LIN28B-202ENST00000635857 CCDC18Q5T9S5 1454 aa27.28■■□□□ 1.96
LIN28B-202ENST00000635857 FYCO1Q9BQS8 1478 aa27.28■■□□□ 1.96
LIN28B-202ENST00000635857 LOC105371045A0A1W2PR82 267 aa27.28■■□□□ 1.96
LIN28B-202ENST00000635857 MAGI3Q5TCQ9 1506 aa27.26■■□□□ 1.96
LIN28B-202ENST00000635857 LRRIQ1Q96JM4 1722 aa27.22■■□□□ 1.95
LIN28B-202ENST00000635857 KIF14Q15058 1648 aa27.16■■□□□ 1.94
LIN28B-202ENST00000635857 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.15■■□□□ 1.94
LIN28B-202ENST00000635857 TROQ12816 1431 aaPredicted RBP27.15■■□□□ 1.94
LIN28B-202ENST00000635857 TTC37Q6PGP7 1564 aa27.13■■□□□ 1.93
LIN28B-202ENST00000635857 CFAP74Q9C0B2 1584 aa27.11■■□□□ 1.93
LIN28B-202ENST00000635857 PHLDB1Q86UU1 1377 aa27.1■■□□□ 1.93
LIN28B-202ENST00000635857 NEO1Q92859 1461 aa27.09■■□□□ 1.93
LIN28B-202ENST00000635857 MYO5CQ9NQX4 1742 aa27.07■■□□□ 1.92
LIN28B-202ENST00000635857 FANCAO15360 1455 aa27.03■■□□□ 1.92
LIN28B-202ENST00000635857 VPS8Q8N3P4 1428 aa27.03■■□□□ 1.92
LIN28B-202ENST00000635857 COL17A1Q9UMD9 1497 aaPredicted RBP27.03■■□□□ 1.92
LIN28B-202ENST00000635857 ARAP3Q8WWN8 1544 aa27.02■■□□□ 1.92
LIN28B-202ENST00000635857 MTUS2Q5JR59 1369 aa26.99■■□□□ 1.91
LIN28B-202ENST00000635857 PLCH2O75038 1416 aa26.99■■□□□ 1.91
LIN28B-202ENST00000635857 AKNAQ7Z591 1439 aa26.96■■□□□ 1.91
LIN28B-202ENST00000635857 ARHGAP5Q13017 1502 aa26.95■■□□□ 1.9
LIN28B-202ENST00000635857 EHBP1L1Q8N3D4 1523 aa26.94■■□□□ 1.9
LIN28B-202ENST00000635857 EFCAB2Q5VUJ9 269 aa26.93■■□□□ 1.9
LIN28B-202ENST00000635857 DENND4BO75064 1496 aaPredicted RBP26.91■■□□□ 1.9
LIN28B-202ENST00000635857 PREX2Q70Z35 1606 aa26.9■■□□□ 1.9
LIN28B-202ENST00000635857 ADGRL1O94910 1474 aa26.9■■□□□ 1.9
LIN28B-202ENST00000635857 TIAM1Q13009 1591 aa26.88■■□□□ 1.89
LIN28B-202ENST00000635857 CDC42BPBQ9Y5S2 1711 aa26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms