RNA–Protein interactions for RNA: ENST00000634271.1

SMARCA2-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 4

Gene SMARCA2, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-218ENST00000634271 PCGF6Q9BYE7 350 aa9.13□□□□□ -0.95
SMARCA2-218ENST00000634271 TRIM26Q12899 539 aaPredicted RBP9.11□□□□□ -0.95
SMARCA2-218ENST00000634271 HMGXB3Q12766 1538 aa9.1□□□□□ -0.95
SMARCA2-218ENST00000634271 ATAD2BQ9ULI0 1458 aa9.08□□□□□ -0.96
SMARCA2-218ENST00000634271 CD44P16070 742 aaKnown RBP9.07□□□□□ -0.96
SMARCA2-218ENST00000634271 THOC2Q8NI27 1593 aaKnown RBP9.07□□□□□ -0.96
SMARCA2-218ENST00000634271 PRR29P0C7W0 189 aa9.06□□□□□ -0.96
SMARCA2-218ENST00000634271 SMARCA2P51531 1590 aa9.06□□□□□ -0.96
SMARCA2-218ENST00000634271 NESP48681 1621 aa9.04□□□□□ -0.96
SMARCA2-218ENST00000634271 SMARCA4P51532 1647 aa9.02□□□□□ -0.97
SMARCA2-218ENST00000634271 MYT1Q01538 1121 aa9.01□□□□□ -0.97
SMARCA2-218ENST00000634271 PEG3Q9GZU2 1588 aa9□□□□□ -0.97
SMARCA2-218ENST00000634271 LAMC3Q9Y6N6 1575 aa9□□□□□ -0.97
SMARCA2-218ENST00000634271 FARP1Q9Y4F1 1045 aaPredicted RBP8.98□□□□□ -0.97
SMARCA2-218ENST00000634271 BAZ1BQ9UIG0 1483 aaKnown RBP8.96□□□□□ -0.97
SMARCA2-218ENST00000634271 DCBLD2Q96PD2 775 aa8.94□□□□□ -0.98
SMARCA2-218ENST00000634271 BAZ1AQ9NRL2 1556 aaPredicted RBP8.94□□□□□ -0.98
SMARCA2-218ENST00000634271 KIF21AQ7Z4S6 1674 aa8.94□□□□□ -0.98
SMARCA2-218ENST00000634271 PDS5BQ9NTI5 1447 aa8.93□□□□□ -0.98
SMARCA2-218ENST00000634271 PPARGC1BQ86YN6 1023 aaKnown RBP8.92□□□□□ -0.98
SMARCA2-218ENST00000634271 TRIM41Q8WV44 630 aa8.91□□□□□ -0.98
SMARCA2-218ENST00000634271 WDR62O43379 1518 aa8.9□□□□□ -0.99
SMARCA2-218ENST00000634271 RSF1Q96T23 1441 aaPredicted RBP8.88□□□□□ -0.99
SMARCA2-218ENST00000634271 ZNF579Q8NAF0 562 aaKnown RBP8.88□□□□□ -0.99
SMARCA2-218ENST00000634271 MRC2Q9UBG0 1479 aa8.88□□□□□ -0.99
SMARCA2-218ENST00000634271 ZRANB1Q9UGI0 708 aa8.87□□□□□ -0.99
SMARCA2-218ENST00000634271 GALR2O43603 387 aaPredicted RBP8.86□□□□□ -0.99
SMARCA2-218ENST00000634271 OTUD5Q96G74 571 aa8.86□□□□□ -0.99
SMARCA2-218ENST00000634271 CADPSQ9ULU8 1353 aa8.86□□□□□ -0.99
SMARCA2-218ENST00000634271 POTEB2H3BUK9 544 aa8.84□□□□□ -0.99
SMARCA2-218ENST00000634271 CLCN6P51797 869 aa8.83□□□□□ -1
SMARCA2-218ENST00000634271 LOC105371045A0A1W2PR82 267 aa8.82□□□□□ -1
SMARCA2-218ENST00000634271 POTEMA6NI47 508 aa8.82□□□□□ -1
SMARCA2-218ENST00000634271 MROH2BQ7Z745 1585 aa8.82□□□□□ -1
SMARCA2-218ENST00000634271 POTEGQ6S5H5 508 aa8.78□□□□□ -1
SMARCA2-218ENST00000634271 CREBZFQ9NS37 354 aa8.78□□□□□ -1
SMARCA2-218ENST00000634271 CEP164Q9UPV0 1460 aa8.77□□□□□ -1
SMARCA2-218ENST00000634271 PHF12Q96QT6 1004 aa8.77□□□□□ -1.01
SMARCA2-218ENST00000634271 WRNQ14191 1432 aaPredicted RBP eCLIP8.75□□□□□ -1.01
SMARCA2-218ENST00000634271 CENPBP07199 599 aaPredicted RBP8.75□□□□□ -1.01
SMARCA2-218ENST00000634271 FANCD2Q9BXW9 1451 aa8.74□□□□□ -1.01
SMARCA2-218ENST00000634271 RIMBP3CA6NJZ7 1639 aa8.72□□□□□ -1.01
SMARCA2-218ENST00000634271 RIMBP3BA6NNM3 1639 aa8.72□□□□□ -1.01
SMARCA2-218ENST00000634271 RIMBP3Q9UFD9 1639 aa8.72□□□□□ -1.01
SMARCA2-218ENST00000634271 CFTRP13569 1480 aa8.72□□□□□ -1.01
SMARCA2-218ENST00000634271 EEA1Q15075 1411 aa8.71□□□□□ -1.02
SMARCA2-218ENST00000634271 ACIN1Q9UKV3 1341 aaKnown RBP8.7□□□□□ -1.02
SMARCA2-218ENST00000634271 URB2Q14146 1524 aaKnown RBP8.7□□□□□ -1.02
SMARCA2-218ENST00000634271 ARHGEF11O15085 1522 aa8.68□□□□□ -1.02
SMARCA2-218ENST00000634271 WIZO95785 1651 aa8.68□□□□□ -1.02
SMARCA2-218ENST00000634271 PAK3O75914 559 aaPredicted RBP8.65□□□□□ -1.02
SMARCA2-218ENST00000634271 METRNQ9UJH8 293 aa8.65□□□□□ -1.02
SMARCA2-218ENST00000634271 POTEJP0CG39 1038 aa8.64□□□□□ -1.03
SMARCA2-218ENST00000634271 TOP2AP11388 1531 aaKnown RBP8.64□□□□□ -1.03
SMARCA2-218ENST00000634271 CLSPNQ9HAW4 1339 aa8.63□□□□□ -1.03
SMARCA2-218ENST00000634271 IFT140Q96RY7 1462 aa8.63□□□□□ -1.03
SMARCA2-218ENST00000634271 PRDM2Q13029 1718 aa8.63□□□□□ -1.03
SMARCA2-218ENST00000634271 LCE2DQ5TA82 110 aaPredicted RBP8.62□□□□□ -1.03
SMARCA2-218ENST00000634271 MS4A3Q96HJ5 214 aa8.62□□□□□ -1.03
SMARCA2-218ENST00000634271 CCER1Q8TC90 406 aaPredicted RBP8.61□□□□□ -1.03
SMARCA2-218ENST00000634271 ZNF608Q9ULD9 1512 aaPredicted RBP8.6□□□□□ -1.03
SMARCA2-218ENST00000634271 STAG3Q9UJ98 1225 aa8.59□□□□□ -1.03
SMARCA2-218ENST00000634271 TNIKQ9UKE5 1360 aa8.59□□□□□ -1.03
SMARCA2-218ENST00000634271 DIEXFQ68CQ4 756 aaKnown RBP8.58□□□□□ -1.04
SMARCA2-218ENST00000634271 ASTLQ6HA08 431 aaPredicted RBP8.58□□□□□ -1.04
SMARCA2-218ENST00000634271 ARAP1Q96P48 1450 aa8.57□□□□□ -1.04
SMARCA2-218ENST00000634271 ATMINO43313 823 aaPredicted RBP8.57□□□□□ -1.04
SMARCA2-218ENST00000634271 EIF4G3O43432 1585 aaKnown RBP8.56□□□□□ -1.04
SMARCA2-218ENST00000634271 MNX1P50219 401 aaPredicted RBP8.56□□□□□ -1.04
SMARCA2-218ENST00000634271 CEP162Q5TB80 1403 aa8.55□□□□□ -1.04
SMARCA2-218ENST00000634271 TOPBP1Q92547 1522 aa8.55□□□□□ -1.04
SMARCA2-218ENST00000634271 SLC39A7Q92504 469 aa8.55□□□□□ -1.04
SMARCA2-218ENST00000634271 GOLGA3Q08378 1498 aa8.55□□□□□ -1.04
SMARCA2-218ENST00000634271 ABCC8Q09428 1581 aa8.55□□□□□ -1.04
SMARCA2-218ENST00000634271 CYB5RLQ6IPT4 315 aa8.54□□□□□ -1.04
SMARCA2-218ENST00000634271 CHD1O14646 1710 aa8.54□□□□□ -1.04
SMARCA2-218ENST00000634271 KIF21BO75037 1637 aa8.54□□□□□ -1.04
SMARCA2-218ENST00000634271 NPM1P06748 294 aaKnown RBP eCLIP8.53□□□□□ -1.04
SMARCA2-218ENST00000634271 NEUROD1Q13562 356 aa8.53□□□□□ -1.04
SMARCA2-218ENST00000634271 FAM163AQ96GL9 167 aaPredicted RBP8.53□□□□□ -1.04
SMARCA2-218ENST00000634271 PCDH10Q9P2E7 1040 aa8.53□□□□□ -1.04
SMARCA2-218ENST00000634271 TARBP1Q13395 1621 aaKnown RBP8.52□□□□□ -1.05
SMARCA2-218ENST00000634271 FAM9AQ8IZU1 332 aaPredicted RBP8.52□□□□□ -1.05
SMARCA2-218ENST00000634271 DNMBPQ6XZF7 1577 aa8.52□□□□□ -1.05
SMARCA2-218ENST00000634271 ZNF316A6NFI3 1004 aaPredicted RBP8.51□□□□□ -1.05
SMARCA2-218ENST00000634271 C7P10643 843 aa8.51□□□□□ -1.05
SMARCA2-218ENST00000634271 GTF3C3Q9Y5Q9 886 aa8.51□□□□□ -1.05
SMARCA2-218ENST00000634271 SPDYE4A6NLX3 237 aa8.5□□□□□ -1.05
SMARCA2-218ENST00000634271 ATN1P54259 1190 aaPredicted RBP8.49□□□□□ -1.05
SMARCA2-218ENST00000634271 CLASP1Q7Z460 1538 aa8.49□□□□□ -1.05
SMARCA2-218ENST00000634271 MAMSTRQ6ZN01 415 aa8.48□□□□□ -1.05
SMARCA2-218ENST00000634271 TTBK1Q5TCY1 1321 aaPredicted RBP8.48□□□□□ -1.05
SMARCA2-218ENST00000634271 WDR97A6NE52 1622 aa8.47□□□□□ -1.05
SMARCA2-218ENST00000634271 CCDC88BA6NC98 1476 aa8.47□□□□□ -1.05
SMARCA2-218ENST00000634271 AQRO60306 1485 aaKnown RBP eCLIP8.47□□□□□ -1.05
SMARCA2-218ENST00000634271 POTEFA5A3E0 1075 aa8.47□□□□□ -1.05
SMARCA2-218ENST00000634271 SCUBE2Q9NQ36 999 aa8.47□□□□□ -1.05
SMARCA2-218ENST00000634271 TSPYL2Q9H2G4 693 aaPredicted RBP8.46□□□□□ -1.06
SMARCA2-218ENST00000634271 POLA1P09884 1462 aaPredicted RBP8.45□□□□□ -1.06
SMARCA2-218ENST00000634271 TRPC6Q9Y210 931 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms