RNA–Protein interactions for RNA: ENST00000629104.1

CHD2-216, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-216ENST00000629104 SHROOM2Q13796 1616 aa14.9□□□□□ -0.02
CHD2-216ENST00000629104 RAPGEF2Q9Y4G8 1499 aa14.89□□□□□ -0.03
CHD2-216ENST00000629104 EEA1Q15075 1411 aa14.88□□□□□ -0.03
CHD2-216ENST00000629104 PRXQ9BXM0 1461 aa14.86□□□□□ -0.03
CHD2-216ENST00000629104 KIAA0586Q9BVV6 1533 aa14.86□□□□□ -0.03
CHD2-216ENST00000629104 ARAP1Q96P48 1450 aa14.84□□□□□ -0.03
CHD2-216ENST00000629104 ERCC6L2Q5T890 1561 aa14.83□□□□□ -0.04
CHD2-216ENST00000629104 CSRNP3Q8WYN3 585 aa14.83□□□□□ -0.04
CHD2-216ENST00000629104 JPH4Q96JJ6 628 aa14.81□□□□□ -0.04
CHD2-216ENST00000629104 CTTNBP2Q8WZ74 1663 aa14.81□□□□□ -0.04
CHD2-216ENST00000629104 IQGAP2Q13576 1575 aa14.8□□□□□ -0.04
CHD2-216ENST00000629104 FAM9AQ8IZU1 332 aaPredicted RBP14.79□□□□□ -0.04
CHD2-216ENST00000629104 PRG4Q92954 1404 aaPredicted RBP14.79□□□□□ -0.04
CHD2-216ENST00000629104 CYB5RLQ6IPT4 315 aa14.78□□□□□ -0.04
CHD2-216ENST00000629104 KIF21BO75037 1637 aa14.76□□□□□ -0.05
CHD2-216ENST00000629104 UGGT2Q9NYU1 1516 aa14.72□□□□□ -0.05
CHD2-216ENST00000629104 CARMIL2Q6F5E8 1435 aa14.68□□□□□ -0.06
CHD2-216ENST00000629104 DISP1Q96F81 1524 aa14.68□□□□□ -0.06
CHD2-216ENST00000629104 KIAA0556O60303 1618 aa14.67□□□□□ -0.06
CHD2-216ENST00000629104 GOLGA3Q08378 1498 aa14.64□□□□□ -0.07
CHD2-216ENST00000629104 TNIKQ9UKE5 1360 aa14.63□□□□□ -0.07
CHD2-216ENST00000629104 PTPRGP23470 1445 aa14.61□□□□□ -0.07
CHD2-216ENST00000629104 SAMD9Q5K651 1589 aa14.6□□□□□ -0.07
CHD2-216ENST00000629104 ADCY10Q96PN6 1610 aa14.59□□□□□ -0.07
CHD2-216ENST00000629104 EHMT2Q96KQ7 1210 aa14.58□□□□□ -0.08
CHD2-216ENST00000629104 UBTFP17480 764 aaKnown RBP14.57□□□□□ -0.08
CHD2-216ENST00000629104 TTBK1Q5TCY1 1321 aaPredicted RBP14.57□□□□□ -0.08
CHD2-216ENST00000629104 FOXD1Q16676 465 aa14.56□□□□□ -0.08
CHD2-216ENST00000629104 EFCAB5A4FU69 1503 aa14.53□□□□□ -0.08
CHD2-216ENST00000629104 UHRF1BP1LA0JNW5 1464 aa14.53□□□□□ -0.08
CHD2-216ENST00000629104 UACAQ9BZF9 1416 aa14.53□□□□□ -0.08
CHD2-216ENST00000629104 ABCC2Q92887 1545 aa14.52□□□□□ -0.08
CHD2-216ENST00000629104 RANGAP1P46060 587 aaPredicted RBP14.51□□□□□ -0.09
CHD2-216ENST00000629104 P3H3Q8IVL6 736 aa14.51□□□□□ -0.09
CHD2-216ENST00000629104 ABCA8O94911 1581 aa14.5□□□□□ -0.09
CHD2-216ENST00000629104 MAPKBP1O60336 1514 aa14.49□□□□□ -0.09
CHD2-216ENST00000629104 PLB1Q6P1J6 1458 aa14.49□□□□□ -0.09
CHD2-216ENST00000629104 NPM1P06748 294 aaKnown RBP eCLIP14.48□□□□□ -0.09
CHD2-216ENST00000629104 FHOD3Q2V2M9 1422 aa14.48□□□□□ -0.09
CHD2-216ENST00000629104 KDM5BQ9UGL1 1544 aa14.46□□□□□ -0.1
CHD2-216ENST00000629104 ARHGAP35Q9NRY4 1499 aa14.45□□□□□ -0.1
CHD2-216ENST00000629104 ZCCHC11Q5TAX3 1644 aaKnown RBP14.45□□□□□ -0.1
CHD2-216ENST00000629104 TRHP20396 242 aaPredicted RBP14.45□□□□□ -0.1
CHD2-216ENST00000629104 RAPGEF6Q8TEU7 1601 aa14.44□□□□□ -0.1
CHD2-216ENST00000629104 KIF13AQ9H1H9 1805 aa14.43□□□□□ -0.1
CHD2-216ENST00000629104 DIP2BQ9P265 1576 aa14.39□□□□□ -0.11
CHD2-216ENST00000629104 ABCC10Q5T3U5 1492 aa14.39□□□□□ -0.11
CHD2-216ENST00000629104 ASXL2Q76L83 1435 aa14.39□□□□□ -0.11
CHD2-216ENST00000629104 CLIP1P30622 1438 aa14.37□□□□□ -0.11
CHD2-216ENST00000629104 FMN1Q68DA7 1419 aa14.37□□□□□ -0.11
CHD2-216ENST00000629104 NUP153P49790 1475 aaKnown RBP14.37□□□□□ -0.11
CHD2-216ENST00000629104 ATP10BO94823 1461 aa14.36□□□□□ -0.11
CHD2-216ENST00000629104 LOC105371045A0A1W2PR82 267 aa14.35□□□□□ -0.11
CHD2-216ENST00000629104 WDR7Q9Y4E6 1490 aa14.33□□□□□ -0.12
CHD2-216ENST00000629104 FAM69CQ0P6D2 419 aa14.33□□□□□ -0.12
CHD2-216ENST00000629104 GLI2P10070 1586 aa14.33□□□□□ -0.12
CHD2-216ENST00000629104 HECW1Q76N89 1606 aa14.33□□□□□ -0.12
CHD2-216ENST00000629104 CEP162Q5TB80 1403 aa14.32□□□□□ -0.12
CHD2-216ENST00000629104 ARID3CA6NKF2 412 aa14.32□□□□□ -0.12
CHD2-216ENST00000629104 EPRSP07814 1512 aaKnown RBP14.31□□□□□ -0.12
CHD2-216ENST00000629104 PCF11O94913 1555 aaKnown RBP14.3□□□□□ -0.12
CHD2-216ENST00000629104 LRRIQ1Q96JM4 1722 aa14.29□□□□□ -0.12
CHD2-216ENST00000629104 TSPOAP1O95153 1857 aa14.29□□□□□ -0.12
CHD2-216ENST00000629104 CDK13Q14004 1512 aaKnown RBP14.28□□□□□ -0.12
CHD2-216ENST00000629104 MAP3K4Q9Y6R4 1608 aa14.28□□□□□ -0.12
CHD2-216ENST00000629104 CASKIN1Q8WXD9 1431 aa14.27□□□□□ -0.12
CHD2-216ENST00000629104 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.27□□□□□ -0.13
CHD2-216ENST00000629104 HNRNPUL2Q1KMD3 747 aaKnown RBP14.27□□□□□ -0.13
CHD2-216ENST00000629104 FYCO1Q9BQS8 1478 aa14.25□□□□□ -0.13
CHD2-216ENST00000629104 PLPPR3Q6T4P5 718 aa14.25□□□□□ -0.13
CHD2-216ENST00000629104 ATP1B4Q9UN42 357 aaPredicted RBP14.25□□□□□ -0.13
CHD2-216ENST00000629104 PPRC1Q5VV67 1664 aaKnown RBP14.25□□□□□ -0.13
CHD2-216ENST00000629104 CFAP43Q8NDM7 1665 aa14.25□□□□□ -0.13
CHD2-216ENST00000629104 KCNH8Q96L42 1107 aa14.23□□□□□ -0.13
CHD2-216ENST00000629104 CCDC18Q5T9S5 1454 aa14.22□□□□□ -0.13
CHD2-216ENST00000629104 ABCA9Q8IUA7 1624 aa14.22□□□□□ -0.13
CHD2-216ENST00000629104 PLEKHD1A6NEE1 506 aa14.21□□□□□ -0.13
CHD2-216ENST00000629104 CD109Q6YHK3 1445 aa14.18□□□□□ -0.14
CHD2-216ENST00000629104 MAGI3Q5TCQ9 1506 aa14.17□□□□□ -0.14
CHD2-216ENST00000629104 CDK11AQ9UQ88 783 aaPredicted RBP14.17□□□□□ -0.14
CHD2-216ENST00000629104 TEX14Q8IWB6 1497 aa14.17□□□□□ -0.14
CHD2-216ENST00000629104 VPS8Q8N3P4 1428 aa14.15□□□□□ -0.14
CHD2-216ENST00000629104 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.15□□□□□ -0.14
CHD2-216ENST00000629104 TTC37Q6PGP7 1564 aa14.15□□□□□ -0.14
CHD2-216ENST00000629104 KDM6BO15054 1643 aa14.15□□□□□ -0.14
CHD2-216ENST00000629104 KIF14Q15058 1648 aa14.15□□□□□ -0.14
CHD2-216ENST00000629104 TROQ12816 1431 aaPredicted RBP14.15□□□□□ -0.14
CHD2-216ENST00000629104 MYO5CQ9NQX4 1742 aa14.1□□□□□ -0.15
CHD2-216ENST00000629104 TIAM1Q13009 1591 aa14.08□□□□□ -0.16
CHD2-216ENST00000629104 CFAP74Q9C0B2 1584 aa14.08□□□□□ -0.16
CHD2-216ENST00000629104 NEO1Q92859 1461 aa14.07□□□□□ -0.16
CHD2-216ENST00000629104 COL17A1Q9UMD9 1497 aaPredicted RBP14.07□□□□□ -0.16
CHD2-216ENST00000629104 EHBP1L1Q8N3D4 1523 aa14.06□□□□□ -0.16
CHD2-216ENST00000629104 MTUS2Q5JR59 1369 aa14.06□□□□□ -0.16
CHD2-216ENST00000629104 PLCH2O75038 1416 aa14.06□□□□□ -0.16
CHD2-216ENST00000629104 ARAP3Q8WWN8 1544 aa14.05□□□□□ -0.16
CHD2-216ENST00000629104 PHLDB1Q86UU1 1377 aa14.05□□□□□ -0.16
CHD2-216ENST00000629104 FANCAO15360 1455 aa14.05□□□□□ -0.16
CHD2-216ENST00000629104 PREX2Q70Z35 1606 aa14.04□□□□□ -0.16
CHD2-216ENST00000629104 CDC42BPAQ5VT25 1732 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms