RNA–Protein interactions for RNA: ENST00000628979.2

CIRBP-246, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-246ENST00000628979 SHROOM2Q13796 1616 aa34.9■■■■□ 3.18
CIRBP-246ENST00000628979 PRG4Q92954 1404 aaPredicted RBP34.83■■■■□ 3.17
CIRBP-246ENST00000628979 KIAA0586Q9BVV6 1533 aa34.81■■■■□ 3.16
CIRBP-246ENST00000628979 RAPGEF2Q9Y4G8 1499 aa34.78■■■■□ 3.16
CIRBP-246ENST00000628979 CHIC1Q5VXU3 224 aa34.68■■■■□ 3.14
CIRBP-246ENST00000628979 IQGAP2Q13576 1575 aa34.62■■■■□ 3.13
CIRBP-246ENST00000628979 CSRNP3Q8WYN3 585 aa34.6■■■■□ 3.13
CIRBP-246ENST00000628979 FAM9AQ8IZU1 332 aaPredicted RBP34.59■■■■□ 3.13
CIRBP-246ENST00000628979 PRXQ9BXM0 1461 aa34.58■■■■□ 3.13
CIRBP-246ENST00000628979 TRHP20396 242 aaPredicted RBP34.57■■■■□ 3.12
CIRBP-246ENST00000628979 TTBK1Q5TCY1 1321 aaPredicted RBP34.53■■■■□ 3.12
CIRBP-246ENST00000628979 EEA1Q15075 1411 aa34.51■■■■□ 3.12
CIRBP-246ENST00000628979 CARMIL2Q6F5E8 1435 aa34.48■■■■□ 3.11
CIRBP-246ENST00000628979 CTTNBP2Q8WZ74 1663 aa34.46■■■■□ 3.11
CIRBP-246ENST00000628979 PTPRGP23470 1445 aa34.39■■■■□ 3.1
CIRBP-246ENST00000628979 UGGT2Q9NYU1 1516 aa34.39■■■■□ 3.1
CIRBP-246ENST00000628979 TNIKQ9UKE5 1360 aa34.38■■■■□ 3.09
CIRBP-246ENST00000628979 DISP1Q96F81 1524 aa34.37■■■■□ 3.09
CIRBP-246ENST00000628979 NPM1P06748 294 aaKnown RBP eCLIP34.32■■■■□ 3.08
CIRBP-246ENST00000628979 ADCY10Q96PN6 1610 aa34.3■■■■□ 3.08
CIRBP-246ENST00000628979 KIAA0556O60303 1618 aa34.28■■■■□ 3.08
CIRBP-246ENST00000628979 EHMT2Q96KQ7 1210 aa34.24■■■■□ 3.07
CIRBP-246ENST00000628979 GOLGA3Q08378 1498 aa34.21■■■■□ 3.07
CIRBP-246ENST00000628979 KIF21BO75037 1637 aa34.18■■■■□ 3.06
CIRBP-246ENST00000628979 RANGAP1P46060 587 aaPredicted RBP34.17■■■■□ 3.06
CIRBP-246ENST00000628979 P3H3Q8IVL6 736 aa34.15■■■■□ 3.06
CIRBP-246ENST00000628979 UACAQ9BZF9 1416 aa34.13■■■■□ 3.05
CIRBP-246ENST00000628979 ABCC2Q92887 1545 aa34.06■■■■□ 3.04
CIRBP-246ENST00000628979 UBTFP17480 764 aaKnown RBP34.06■■■■□ 3.04
CIRBP-246ENST00000628979 UHRF1BP1LA0JNW5 1464 aa34.06■■■■□ 3.04
CIRBP-246ENST00000628979 MAPKBP1O60336 1514 aa34.05■■■■□ 3.04
CIRBP-246ENST00000628979 KIF13AQ9H1H9 1805 aa34■■■■□ 3.03
CIRBP-246ENST00000628979 FAM69CQ0P6D2 419 aa34■■■■□ 3.03
CIRBP-246ENST00000628979 PLB1Q6P1J6 1458 aa33.99■■■■□ 3.03
CIRBP-246ENST00000628979 SAMD9Q5K651 1589 aa33.98■■■■□ 3.03
CIRBP-246ENST00000628979 ABCC10Q5T3U5 1492 aa33.95■■■■□ 3.03
CIRBP-246ENST00000628979 ABCA8O94911 1581 aa33.9■■■■□ 3.02
CIRBP-246ENST00000628979 KDM5BQ9UGL1 1544 aa33.9■■■■□ 3.02
CIRBP-246ENST00000628979 ASXL2Q76L83 1435 aa33.9■■■■□ 3.02
CIRBP-246ENST00000628979 ZCCHC11Q5TAX3 1644 aaKnown RBP33.9■■■■□ 3.02
CIRBP-246ENST00000628979 DIP2BQ9P265 1576 aa33.89■■■■□ 3.02
CIRBP-246ENST00000628979 FHOD3Q2V2M9 1422 aa33.86■■■■□ 3.01
CIRBP-246ENST00000628979 ARID3CA6NKF2 412 aa33.83■■■■□ 3.01
CIRBP-246ENST00000628979 EFCAB5A4FU69 1503 aa33.79■■■■□ 3
CIRBP-246ENST00000628979 TSPOAP1O95153 1857 aa33.75■■■□□ 2.99
CIRBP-246ENST00000628979 RAPGEF6Q8TEU7 1601 aa33.73■■■□□ 2.99
CIRBP-246ENST00000628979 WDR7Q9Y4E6 1490 aa33.68■■■□□ 2.98
CIRBP-246ENST00000628979 EPRSP07814 1512 aaKnown RBP33.68■■■□□ 2.98
CIRBP-246ENST00000628979 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.67■■■□□ 2.98
CIRBP-246ENST00000628979 HNRNPUL2Q1KMD3 747 aaKnown RBP33.67■■■□□ 2.98
CIRBP-246ENST00000628979 KCNH8Q96L42 1107 aa33.67■■■□□ 2.98
CIRBP-246ENST00000628979 ATP10BO94823 1461 aa33.66■■■□□ 2.98
CIRBP-246ENST00000628979 GLI2P10070 1586 aa33.65■■■□□ 2.98
CIRBP-246ENST00000628979 ARHGAP35Q9NRY4 1499 aa33.63■■■□□ 2.97
CIRBP-246ENST00000628979 NUP153P49790 1475 aaKnown RBP33.58■■■□□ 2.97
CIRBP-246ENST00000628979 ATP1B4Q9UN42 357 aaPredicted RBP33.55■■■□□ 2.96
CIRBP-246ENST00000628979 MAP3K4Q9Y6R4 1608 aa33.52■■■□□ 2.96
CIRBP-246ENST00000628979 FMN1Q68DA7 1419 aa33.51■■■□□ 2.95
CIRBP-246ENST00000628979 PPRC1Q5VV67 1664 aaKnown RBP33.5■■■□□ 2.95
CIRBP-246ENST00000628979 KDM6BO15054 1643 aa33.44■■■□□ 2.94
CIRBP-246ENST00000628979 CD109Q6YHK3 1445 aa33.43■■■□□ 2.94
CIRBP-246ENST00000628979 PLEKHD1A6NEE1 506 aa33.41■■■□□ 2.94
CIRBP-246ENST00000628979 CLIP1P30622 1438 aa33.41■■■□□ 2.94
CIRBP-246ENST00000628979 CFAP43Q8NDM7 1665 aa33.41■■■□□ 2.94
CIRBP-246ENST00000628979 CDK13Q14004 1512 aaKnown RBP33.38■■■□□ 2.93
CIRBP-246ENST00000628979 TEX14Q8IWB6 1497 aa33.38■■■□□ 2.93
CIRBP-246ENST00000628979 HECW1Q76N89 1606 aa33.38■■■□□ 2.93
CIRBP-246ENST00000628979 LOC105371045A0A1W2PR82 267 aa33.34■■■□□ 2.93
CIRBP-246ENST00000628979 MAGI3Q5TCQ9 1506 aa33.29■■■□□ 2.92
CIRBP-246ENST00000628979 ABCA9Q8IUA7 1624 aa33.28■■■□□ 2.92
CIRBP-246ENST00000628979 PCF11O94913 1555 aaKnown RBP33.25■■■□□ 2.91
CIRBP-246ENST00000628979 CASKIN1Q8WXD9 1431 aa33.23■■■□□ 2.91
CIRBP-246ENST00000628979 CDK11AQ9UQ88 783 aaPredicted RBP33.22■■■□□ 2.91
CIRBP-246ENST00000628979 COL17A1Q9UMD9 1497 aaPredicted RBP33.22■■■□□ 2.91
CIRBP-246ENST00000628979 LRRIQ1Q96JM4 1722 aa33.22■■■□□ 2.91
CIRBP-246ENST00000628979 CEP162Q5TB80 1403 aa33.21■■■□□ 2.91
CIRBP-246ENST00000628979 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.15■■■□□ 2.9
CIRBP-246ENST00000628979 FYCO1Q9BQS8 1478 aa33.12■■■□□ 2.89
CIRBP-246ENST00000628979 CCDC18Q5T9S5 1454 aa33.11■■■□□ 2.89
CIRBP-246ENST00000628979 TTC37Q6PGP7 1564 aa33.1■■■□□ 2.89
CIRBP-246ENST00000628979 TROQ12816 1431 aaPredicted RBP33.07■■■□□ 2.88
CIRBP-246ENST00000628979 KIF14Q15058 1648 aa33.03■■■□□ 2.88
CIRBP-246ENST00000628979 NEO1Q92859 1461 aa33.03■■■□□ 2.88
CIRBP-246ENST00000628979 PHLDB1Q86UU1 1377 aa33.02■■■□□ 2.88
CIRBP-246ENST00000628979 ARAP3Q8WWN8 1544 aa33.02■■■□□ 2.88
CIRBP-246ENST00000628979 FANCAO15360 1455 aa32.98■■■□□ 2.87
CIRBP-246ENST00000628979 RAPGEF3O95398 923 aa32.96■■■□□ 2.87
CIRBP-246ENST00000628979 AEBP2Q6ZN18 517 aaPredicted RBP32.95■■■□□ 2.87
CIRBP-246ENST00000628979 PLCH2O75038 1416 aa32.94■■■□□ 2.86
CIRBP-246ENST00000628979 AKNAQ7Z591 1439 aa32.94■■■□□ 2.86
CIRBP-246ENST00000628979 CFAP74Q9C0B2 1584 aa32.93■■■□□ 2.86
CIRBP-246ENST00000628979 MYO5CQ9NQX4 1742 aa32.93■■■□□ 2.86
CIRBP-246ENST00000628979 EFCAB2Q5VUJ9 269 aa32.87■■■□□ 2.85
CIRBP-246ENST00000628979 DENND4BO75064 1496 aaPredicted RBP32.85■■■□□ 2.85
CIRBP-246ENST00000628979 ARHGAP5Q13017 1502 aa32.83■■■□□ 2.85
CIRBP-246ENST00000628979 MTUS2Q5JR59 1369 aa32.82■■■□□ 2.84
CIRBP-246ENST00000628979 ADGRL1O94910 1474 aa32.8■■■□□ 2.84
CIRBP-246ENST00000628979 FRMPD1Q5SYB0 1578 aa32.8■■■□□ 2.84
CIRBP-246ENST00000628979 VPS8Q8N3P4 1428 aa32.8■■■□□ 2.84
CIRBP-246ENST00000628979 KDM4FA0A1W2PPD8 638 aa32.79■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms