RNA–Protein interactions for RNA: ENST00000628810.1

SOX2-OT-249, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 618 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-249ENST00000628810 IGF1RP08069 1367 aa16.48■□□□□ 0.23
SOX2-OT-249ENST00000628810 SYNJ2O15056 1496 aa16.44■□□□□ 0.22
SOX2-OT-249ENST00000628810 FHAD1B1AJZ9 1412 aa16.44■□□□□ 0.22
SOX2-OT-249ENST00000628810 PRXQ9BXM0 1461 aa16.41■□□□□ 0.22
SOX2-OT-249ENST00000628810 CHD1O14646 1710 aa16.39■□□□□ 0.21
SOX2-OT-249ENST00000628810 NPM3O75607 178 aaKnown RBP16.39■□□□□ 0.21
SOX2-OT-249ENST00000628810 GRIN2AQ12879 1464 aa16.38■□□□□ 0.21
SOX2-OT-249ENST00000628810 CARMIL1Q5VZK9 1371 aa16.38■□□□□ 0.21
SOX2-OT-249ENST00000628810 KIF21BO75037 1637 aa16.37■□□□□ 0.21
SOX2-OT-249ENST00000628810 CSRNP3Q8WYN3 585 aa16.36■□□□□ 0.21
SOX2-OT-249ENST00000628810 RAPGEF2Q9Y4G8 1499 aa16.35■□□□□ 0.21
SOX2-OT-249ENST00000628810 NUP160Q12769 1436 aa16.31■□□□□ 0.2
SOX2-OT-249ENST00000628810 CHMP7Q8WUX9 453 aaPredicted RBP16.3■□□□□ 0.2
SOX2-OT-249ENST00000628810 CEP170Q5SW79 1584 aa16.3■□□□□ 0.2
SOX2-OT-249ENST00000628810 FAM9AQ8IZU1 332 aaPredicted RBP16.29■□□□□ 0.2
SOX2-OT-249ENST00000628810 CLASP1Q7Z460 1538 aa16.27■□□□□ 0.2
SOX2-OT-249ENST00000628810 GOLGA3Q08378 1498 aa16.24■□□□□ 0.19
SOX2-OT-249ENST00000628810 FBLN2P98095 1184 aa16.24■□□□□ 0.19
SOX2-OT-249ENST00000628810 CTTNBP2Q8WZ74 1663 aa16.22■□□□□ 0.19
SOX2-OT-249ENST00000628810 CACNB1Q02641 598 aaPredicted RBP16.21■□□□□ 0.19
SOX2-OT-249ENST00000628810 RNF39Q9H2S5 420 aa16.21■□□□□ 0.19
SOX2-OT-249ENST00000628810 KIAA0586Q9BVV6 1533 aa16.2■□□□□ 0.18
SOX2-OT-249ENST00000628810 OSCARQ8IYS5 282 aa16.2■□□□□ 0.18
SOX2-OT-249ENST00000628810 KCNA4P22459 653 aa16.19■□□□□ 0.18
SOX2-OT-249ENST00000628810 SHROOM2Q13796 1616 aa16.19■□□□□ 0.18
SOX2-OT-249ENST00000628810 IQGAP2Q13576 1575 aa16.17■□□□□ 0.18
SOX2-OT-249ENST00000628810 UGGT2Q9NYU1 1516 aa16.12■□□□□ 0.17
SOX2-OT-249ENST00000628810 TNIKQ9UKE5 1360 aa16.08■□□□□ 0.16
SOX2-OT-249ENST00000628810 SAMD9Q5K651 1589 aa16.06■□□□□ 0.16
SOX2-OT-249ENST00000628810 C1QBPQ07021 282 aaKnown RBP16.05■□□□□ 0.16
SOX2-OT-249ENST00000628810 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.04■□□□□ 0.16
SOX2-OT-249ENST00000628810 EFCAB5A4FU69 1503 aa16.04■□□□□ 0.16
SOX2-OT-249ENST00000628810 DISP1Q96F81 1524 aa16.04■□□□□ 0.16
SOX2-OT-249ENST00000628810 UBTFP17480 764 aaKnown RBP16.03■□□□□ 0.16
SOX2-OT-249ENST00000628810 JPH4Q96JJ6 628 aa16.03■□□□□ 0.16
SOX2-OT-249ENST00000628810 KIAA0556O60303 1618 aa16.03■□□□□ 0.16
SOX2-OT-249ENST00000628810 ERCC6L2Q5T890 1561 aa16.02■□□□□ 0.16
SOX2-OT-249ENST00000628810 ARHGEF11O15085 1522 aa16.02■□□□□ 0.15
SOX2-OT-249ENST00000628810 PRG4Q92954 1404 aaPredicted RBP16.02■□□□□ 0.15
SOX2-OT-249ENST00000628810 RIMBP3CA6NJZ7 1639 aa15.99■□□□□ 0.15
SOX2-OT-249ENST00000628810 RIMBP3BA6NNM3 1639 aa15.99■□□□□ 0.15
SOX2-OT-249ENST00000628810 RIMBP3Q9UFD9 1639 aa15.99■□□□□ 0.15
SOX2-OT-249ENST00000628810 EHMT2Q96KQ7 1210 aa15.99■□□□□ 0.15
SOX2-OT-249ENST00000628810 LOC105371045A0A1W2PR82 267 aa15.98■□□□□ 0.15
SOX2-OT-249ENST00000628810 CARMIL2Q6F5E8 1435 aa15.98■□□□□ 0.15
SOX2-OT-249ENST00000628810 DNAJC5Q9H3Z4 198 aa15.96■□□□□ 0.15
SOX2-OT-249ENST00000628810 ARHGAP35Q9NRY4 1499 aa15.96■□□□□ 0.14
SOX2-OT-249ENST00000628810 CEP162Q5TB80 1403 aa15.94■□□□□ 0.14
SOX2-OT-249ENST00000628810 CLIP1P30622 1438 aa15.94■□□□□ 0.14
SOX2-OT-249ENST00000628810 ARAP1Q96P48 1450 aa15.92■□□□□ 0.14
SOX2-OT-249ENST00000628810 FHOD3Q2V2M9 1422 aa15.88■□□□□ 0.13
SOX2-OT-249ENST00000628810 PTPRGP23470 1445 aa15.85■□□□□ 0.13
SOX2-OT-249ENST00000628810 ABCA8O94911 1581 aa15.83■□□□□ 0.13
SOX2-OT-249ENST00000628810 RANGAP1P46060 587 aaPredicted RBP15.83■□□□□ 0.12
SOX2-OT-249ENST00000628810 FMN1Q68DA7 1419 aa15.83■□□□□ 0.12
SOX2-OT-249ENST00000628810 UHRF1BP1LA0JNW5 1464 aa15.82■□□□□ 0.12
SOX2-OT-249ENST00000628810 ABCC2Q92887 1545 aa15.81■□□□□ 0.12
SOX2-OT-249ENST00000628810 P3H3Q8IVL6 736 aa15.8■□□□□ 0.12
SOX2-OT-249ENST00000628810 RAPGEF6Q8TEU7 1601 aa15.79■□□□□ 0.12
SOX2-OT-249ENST00000628810 ADCY10Q96PN6 1610 aa15.79■□□□□ 0.12
SOX2-OT-249ENST00000628810 UACAQ9BZF9 1416 aa15.79■□□□□ 0.12
SOX2-OT-249ENST00000628810 PLB1Q6P1J6 1458 aa15.78■□□□□ 0.12
SOX2-OT-249ENST00000628810 PCF11O94913 1555 aaKnown RBP15.77■□□□□ 0.11
SOX2-OT-249ENST00000628810 VPS8Q8N3P4 1428 aa15.76■□□□□ 0.11
SOX2-OT-249ENST00000628810 HECW1Q76N89 1606 aa15.76■□□□□ 0.11
SOX2-OT-249ENST00000628810 FYCO1Q9BQS8 1478 aa15.75■□□□□ 0.11
SOX2-OT-249ENST00000628810 CASKIN1Q8WXD9 1431 aa15.75■□□□□ 0.11
SOX2-OT-249ENST00000628810 NUP153P49790 1475 aaKnown RBP15.74■□□□□ 0.11
SOX2-OT-249ENST00000628810 CYB5RLQ6IPT4 315 aa15.73■□□□□ 0.11
SOX2-OT-249ENST00000628810 KDM5BQ9UGL1 1544 aa15.73■□□□□ 0.11
SOX2-OT-249ENST00000628810 TTBK1Q5TCY1 1321 aaPredicted RBP15.69■□□□□ 0.1
SOX2-OT-249ENST00000628810 ZCCHC11Q5TAX3 1644 aaKnown RBP15.69■□□□□ 0.1
SOX2-OT-249ENST00000628810 LRRIQ1Q96JM4 1722 aa15.69■□□□□ 0.1
SOX2-OT-249ENST00000628810 CCDC18Q5T9S5 1454 aa15.67■□□□□ 0.1
SOX2-OT-249ENST00000628810 EPRSP07814 1512 aaKnown RBP15.67■□□□□ 0.1
SOX2-OT-249ENST00000628810 MAPKBP1O60336 1514 aa15.66■□□□□ 0.1
SOX2-OT-249ENST00000628810 ATP10BO94823 1461 aa15.65■□□□□ 0.1
SOX2-OT-249ENST00000628810 U3KPZ7 1027 aaPredicted RBP15.65■□□□□ 0.1
SOX2-OT-249ENST00000628810 CFAP43Q8NDM7 1665 aa15.64■□□□□ 0.09
SOX2-OT-249ENST00000628810 CDK13Q14004 1512 aaKnown RBP15.63■□□□□ 0.09
SOX2-OT-249ENST00000628810 MAP3K1Q13233 1512 aa15.63■□□□□ 0.09
SOX2-OT-249ENST00000628810 TIAM1Q13009 1591 aa15.6■□□□□ 0.09
SOX2-OT-249ENST00000628810 SLC4A2P04920 1241 aa15.58■□□□□ 0.08
SOX2-OT-249ENST00000628810 ASXL2Q76L83 1435 aa15.57■□□□□ 0.08
SOX2-OT-249ENST00000628810 WDR7Q9Y4E6 1490 aa15.57■□□□□ 0.08
SOX2-OT-249ENST00000628810 NPM1P06748 294 aaKnown RBP eCLIP15.56■□□□□ 0.08
SOX2-OT-249ENST00000628810 MAGI3Q5TCQ9 1506 aa15.55■□□□□ 0.08
SOX2-OT-249ENST00000628810 EHBP1L1Q8N3D4 1523 aa15.53■□□□□ 0.08
SOX2-OT-249ENST00000628810 TROQ12816 1431 aaPredicted RBP15.52■□□□□ 0.08
SOX2-OT-249ENST00000628810 ATP1B4Q9UN42 357 aaPredicted RBP15.52■□□□□ 0.08
SOX2-OT-249ENST00000628810 DIP2BQ9P265 1576 aa15.52■□□□□ 0.07
SOX2-OT-249ENST00000628810 GLI2P10070 1586 aa15.51■□□□□ 0.07
SOX2-OT-249ENST00000628810 ARID3CA6NKF2 412 aa15.51■□□□□ 0.07
SOX2-OT-249ENST00000628810 CDK11AQ9UQ88 783 aaPredicted RBP15.5■□□□□ 0.07
SOX2-OT-249ENST00000628810 ABCC10Q5T3U5 1492 aa15.5■□□□□ 0.07
SOX2-OT-249ENST00000628810 LRRC9Q6ZRR7 1453 aa15.5■□□□□ 0.07
SOX2-OT-249ENST00000628810 KIF14Q15058 1648 aa15.5■□□□□ 0.07
SOX2-OT-249ENST00000628810 ABCA9Q8IUA7 1624 aa15.47■□□□□ 0.07
SOX2-OT-249ENST00000628810 PLEKHD1A6NEE1 506 aa15.47■□□□□ 0.07
SOX2-OT-249ENST00000628810 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms