RNA–Protein interactions for RNA: ENST00000628776.2

PCBP3-221, Transcript of poly(rC) binding protein 3, humanhuman

TSL 5

Gene PCBP3, Length 827 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP3-221ENST00000628776 CHD1O14646 1710 aa17.96■□□□□ 0.47
PCBP3-221ENST00000628776 EHMT2Q96KQ7 1210 aa17.96■□□□□ 0.47
PCBP3-221ENST00000628776 NUP160Q12769 1436 aa17.96■□□□□ 0.47
PCBP3-221ENST00000628776 RIMBP3CA6NJZ7 1639 aa17.95■□□□□ 0.46
PCBP3-221ENST00000628776 RIMBP3BA6NNM3 1639 aa17.95■□□□□ 0.46
PCBP3-221ENST00000628776 RIMBP3Q9UFD9 1639 aa17.95■□□□□ 0.46
PCBP3-221ENST00000628776 KIAA0586Q9BVV6 1533 aa17.93■□□□□ 0.46
PCBP3-221ENST00000628776 TNIKQ9UKE5 1360 aa17.9■□□□□ 0.46
PCBP3-221ENST00000628776 LOC105371045A0A1W2PR82 267 aa17.88■□□□□ 0.45
PCBP3-221ENST00000628776 CEP170Q5SW79 1584 aa17.87■□□□□ 0.45
PCBP3-221ENST00000628776 JPH4Q96JJ6 628 aa17.87■□□□□ 0.45
PCBP3-221ENST00000628776 TRIM26Q12899 539 aaPredicted RBP17.86■□□□□ 0.45
PCBP3-221ENST00000628776 IQGAP2Q13576 1575 aa17.84■□□□□ 0.45
PCBP3-221ENST00000628776 CTTNBP2Q8WZ74 1663 aa17.83■□□□□ 0.44
PCBP3-221ENST00000628776 ARHGEF11O15085 1522 aa17.82■□□□□ 0.44
PCBP3-221ENST00000628776 CLASP1Q7Z460 1538 aa17.82■□□□□ 0.44
PCBP3-221ENST00000628776 CARMIL2Q6F5E8 1435 aa17.81■□□□□ 0.44
PCBP3-221ENST00000628776 ZEB1P37275 1124 aaPredicted RBP17.78■□□□□ 0.44
PCBP3-221ENST00000628776 RANGAP1P46060 587 aaPredicted RBP17.77■□□□□ 0.44
PCBP3-221ENST00000628776 UGGT2Q9NYU1 1516 aa17.76■□□□□ 0.43
PCBP3-221ENST00000628776 PRG4Q92954 1404 aaPredicted RBP17.74■□□□□ 0.43
PCBP3-221ENST00000628776 CLIP1P30622 1438 aa17.72■□□□□ 0.43
PCBP3-221ENST00000628776 EFCAB5A4FU69 1503 aa17.72■□□□□ 0.43
PCBP3-221ENST00000628776 SHROOM2Q13796 1616 aa17.72■□□□□ 0.43
PCBP3-221ENST00000628776 CEP162Q5TB80 1403 aa17.71■□□□□ 0.43
PCBP3-221ENST00000628776 P3H3Q8IVL6 736 aa17.65■□□□□ 0.42
PCBP3-221ENST00000628776 DISP1Q96F81 1524 aa17.65■□□□□ 0.42
PCBP3-221ENST00000628776 PTPRGP23470 1445 aa17.64■□□□□ 0.41
PCBP3-221ENST00000628776 SAMD9Q5K651 1589 aa17.63■□□□□ 0.41
PCBP3-221ENST00000628776 KIAA0556O60303 1618 aa17.63■□□□□ 0.41
PCBP3-221ENST00000628776 ARHGAP35Q9NRY4 1499 aa17.63■□□□□ 0.41
PCBP3-221ENST00000628776 FMN1Q68DA7 1419 aa17.62■□□□□ 0.41
PCBP3-221ENST00000628776 TRHP20396 242 aaPredicted RBP17.61■□□□□ 0.41
PCBP3-221ENST00000628776 FHOD3Q2V2M9 1422 aa17.59■□□□□ 0.41
PCBP3-221ENST00000628776 TTBK1Q5TCY1 1321 aaPredicted RBP17.59■□□□□ 0.41
PCBP3-221ENST00000628776 CYB5RLQ6IPT4 315 aa17.59■□□□□ 0.41
PCBP3-221ENST00000628776 ARAP1Q96P48 1450 aa17.57■□□□□ 0.4
PCBP3-221ENST00000628776 ERCC6L2Q5T890 1561 aa17.53■□□□□ 0.4
PCBP3-221ENST00000628776 PPARGC1BQ86YN6 1023 aaKnown RBP17.52■□□□□ 0.4
PCBP3-221ENST00000628776 UACAQ9BZF9 1416 aa17.5■□□□□ 0.39
PCBP3-221ENST00000628776 ATP1B4Q9UN42 357 aaPredicted RBP17.5■□□□□ 0.39
PCBP3-221ENST00000628776 VPS8Q8N3P4 1428 aa17.49■□□□□ 0.39
PCBP3-221ENST00000628776 NPM1P06748 294 aaKnown RBP eCLIP17.49■□□□□ 0.39
PCBP3-221ENST00000628776 APLP2Q06481 763 aa17.49■□□□□ 0.39
PCBP3-221ENST00000628776 CASKIN1Q8WXD9 1431 aa17.46■□□□□ 0.39
PCBP3-221ENST00000628776 UHRF1BP1LA0JNW5 1464 aa17.44■□□□□ 0.38
PCBP3-221ENST00000628776 PLB1Q6P1J6 1458 aa17.44■□□□□ 0.38
PCBP3-221ENST00000628776 CDK11AQ9UQ88 783 aaPredicted RBP17.43■□□□□ 0.38
PCBP3-221ENST00000628776 FYCO1Q9BQS8 1478 aa17.43■□□□□ 0.38
PCBP3-221ENST00000628776 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.42■□□□□ 0.38
PCBP3-221ENST00000628776 HNRNPUL2Q1KMD3 747 aaKnown RBP17.42■□□□□ 0.38
PCBP3-221ENST00000628776 ABCC2Q92887 1545 aa17.42■□□□□ 0.38
PCBP3-221ENST00000628776 ABCA8O94911 1581 aa17.41■□□□□ 0.38
PCBP3-221ENST00000628776 RAPGEF6Q8TEU7 1601 aa17.41■□□□□ 0.38
PCBP3-221ENST00000628776 HECW1Q76N89 1606 aa17.4■□□□□ 0.38
PCBP3-221ENST00000628776 CCDC18Q5T9S5 1454 aa17.38■□□□□ 0.37
PCBP3-221ENST00000628776 PLEKHD1A6NEE1 506 aa17.35■□□□□ 0.37
PCBP3-221ENST00000628776 NUP153P49790 1475 aaKnown RBP17.35■□□□□ 0.37
PCBP3-221ENST00000628776 PCF11O94913 1555 aaKnown RBP17.35■□□□□ 0.37
PCBP3-221ENST00000628776 EPRSP07814 1512 aaKnown RBP17.33■□□□□ 0.37
PCBP3-221ENST00000628776 KDM5BQ9UGL1 1544 aa17.33■□□□□ 0.37
PCBP3-221ENST00000628776 ARID3CA6NKF2 412 aa17.33■□□□□ 0.36
PCBP3-221ENST00000628776 ADCY10Q96PN6 1610 aa17.32■□□□□ 0.36
PCBP3-221ENST00000628776 ATP10BO94823 1461 aa17.31■□□□□ 0.36
PCBP3-221ENST00000628776 MAP3K1Q13233 1512 aa17.3■□□□□ 0.36
PCBP3-221ENST00000628776 MTUS2Q5JR59 1369 aa17.27■□□□□ 0.35
PCBP3-221ENST00000628776 PELP1Q8IZL8 1130 aaKnown RBP17.24■□□□□ 0.35
PCBP3-221ENST00000628776 CDK13Q14004 1512 aaKnown RBP17.24■□□□□ 0.35
PCBP3-221ENST00000628776 ZCCHC11Q5TAX3 1644 aaKnown RBP17.24■□□□□ 0.35
PCBP3-221ENST00000628776 TIAM1Q13009 1591 aa17.23■□□□□ 0.35
PCBP3-221ENST00000628776 ASXL2Q76L83 1435 aa17.22■□□□□ 0.35
PCBP3-221ENST00000628776 MAPKBP1O60336 1514 aa17.22■□□□□ 0.35
PCBP3-221ENST00000628776 TROQ12816 1431 aaPredicted RBP17.21■□□□□ 0.35
PCBP3-221ENST00000628776 WDR7Q9Y4E6 1490 aa17.21■□□□□ 0.35
PCBP3-221ENST00000628776 KCNH8Q96L42 1107 aa17.19■□□□□ 0.34
PCBP3-221ENST00000628776 LRRC9Q6ZRR7 1453 aa17.18■□□□□ 0.34
PCBP3-221ENST00000628776 CFAP43Q8NDM7 1665 aa17.18■□□□□ 0.34
PCBP3-221ENST00000628776 EHBP1L1Q8N3D4 1523 aa17.17■□□□□ 0.34
PCBP3-221ENST00000628776 KANK4Q5T7N3 995 aaPredicted RBP17.15■□□□□ 0.34
PCBP3-221ENST00000628776 LRRIQ1Q96JM4 1722 aa17.14■□□□□ 0.33
PCBP3-221ENST00000628776 KIF14Q15058 1648 aa17.12■□□□□ 0.33
PCBP3-221ENST00000628776 FAM69CQ0P6D2 419 aa17.11■□□□□ 0.33
PCBP3-221ENST00000628776 ABCC10Q5T3U5 1492 aa17.1■□□□□ 0.33
PCBP3-221ENST00000628776 CCNB3Q8WWL7 1395 aa17.09■□□□□ 0.33
PCBP3-221ENST00000628776 SUPT6HQ7KZ85 1726 aaKnown RBP17.09■□□□□ 0.33
PCBP3-221ENST00000628776 MAGI3Q5TCQ9 1506 aa17.07■□□□□ 0.32
PCBP3-221ENST00000628776 NCOA2Q15596 1464 aa17.06■□□□□ 0.32
PCBP3-221ENST00000628776 GLI2P10070 1586 aa17.05■□□□□ 0.32
PCBP3-221ENST00000628776 CD109Q6YHK3 1445 aa17.04■□□□□ 0.32
PCBP3-221ENST00000628776 ILDR1Q86SU0 546 aaPredicted RBP17.04■□□□□ 0.32
PCBP3-221ENST00000628776 CFDP1Q9UEE9 299 aaPredicted RBP17.03■□□□□ 0.32
PCBP3-221ENST00000628776 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.02■□□□□ 0.32
PCBP3-221ENST00000628776 EFCAB2Q5VUJ9 269 aa17.02■□□□□ 0.32
PCBP3-221ENST00000628776 DIP2BQ9P265 1576 aa17.02■□□□□ 0.31
PCBP3-221ENST00000628776 ABCA9Q8IUA7 1624 aa17.01■□□□□ 0.31
PCBP3-221ENST00000628776 PLCH2O75038 1416 aa17.01■□□□□ 0.31
PCBP3-221ENST00000628776 KIF13AQ9H1H9 1805 aa17■□□□□ 0.31
PCBP3-221ENST00000628776 MYOM3Q5VTT5 1437 aa16.99■□□□□ 0.31
PCBP3-221ENST00000628776 MIA2Q96PC5 1412 aa16.98■□□□□ 0.31
PCBP3-221ENST00000628776 GPATCH8Q9UKJ3 1502 aaKnown RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms