RNA–Protein interactions for RNA: ENST00000628689.2

TCF4-266, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-266ENST00000628689 SOCS7O14512 581 aa13.78□□□□□ -0.2
TCF4-266ENST00000628689 CEP170Q5SW79 1584 aa13.78□□□□□ -0.2
TCF4-266ENST00000628689 ILDR2Q71H61 639 aa13.75□□□□□ -0.21
TCF4-266ENST00000628689 FGD5Q6ZNL6 1462 aa13.74□□□□□ -0.21
TCF4-266ENST00000628689 TSPOAP1O95153 1857 aa13.74□□□□□ -0.21
TCF4-266ENST00000628689 DIP2BQ9P265 1576 aa13.74□□□□□ -0.21
TCF4-266ENST00000628689 NPM1P06748 294 aaKnown RBP eCLIP13.71□□□□□ -0.21
TCF4-266ENST00000628689 PBRM1Q86U86 1689 aa13.69□□□□□ -0.22
TCF4-266ENST00000628689 MAPKBP1O60336 1514 aa13.69□□□□□ -0.22
TCF4-266ENST00000628689 SHROOM2Q13796 1616 aa13.68□□□□□ -0.22
TCF4-266ENST00000628689 NUP160Q12769 1436 aa13.67□□□□□ -0.22
TCF4-266ENST00000628689 GRIN2AQ12879 1464 aa13.67□□□□□ -0.22
TCF4-266ENST00000628689 PRG4Q92954 1404 aaPredicted RBP13.63□□□□□ -0.23
TCF4-266ENST00000628689 CUX1P39880 1505 aa13.6□□□□□ -0.23
TCF4-266ENST00000628689 DISP3Q9P2K9 1392 aa13.59□□□□□ -0.23
TCF4-266ENST00000628689 JPH4Q96JJ6 628 aa13.59□□□□□ -0.23
TCF4-266ENST00000628689 ABCA5Q8WWZ7 1642 aa13.57□□□□□ -0.24
TCF4-266ENST00000628689 COL17A1Q9UMD9 1497 aaPredicted RBP13.56□□□□□ -0.24
TCF4-266ENST00000628689 ADCY10Q96PN6 1610 aa13.56□□□□□ -0.24
TCF4-266ENST00000628689 ABCA10Q8WWZ4 1543 aa13.53□□□□□ -0.24
TCF4-266ENST00000628689 ADAMTS12P58397 1594 aa13.52□□□□□ -0.25
TCF4-266ENST00000628689 PPRC1Q5VV67 1664 aaKnown RBP13.51□□□□□ -0.25
TCF4-266ENST00000628689 FHAD1B1AJZ9 1412 aa13.48□□□□□ -0.25
TCF4-266ENST00000628689 TOP2BQ02880 1626 aa13.47□□□□□ -0.25
TCF4-266ENST00000628689 GLI2P10070 1586 aa13.42□□□□□ -0.26
TCF4-266ENST00000628689 PPP4R3CPQ6ZMV5 832 aa13.42□□□□□ -0.26
TCF4-266ENST00000628689 CERKQ8TCT0 537 aa13.41□□□□□ -0.26
TCF4-266ENST00000628689 ASXL2Q76L83 1435 aa13.38□□□□□ -0.27
TCF4-266ENST00000628689 PLB1Q6P1J6 1458 aa13.36□□□□□ -0.27
TCF4-266ENST00000628689 RUSC2Q8N2Y8 1516 aa13.34□□□□□ -0.27
TCF4-266ENST00000628689 SPATA31D1Q6ZQQ2 1576 aa13.32□□□□□ -0.28
TCF4-266ENST00000628689 TEX14Q8IWB6 1497 aa13.32□□□□□ -0.28
TCF4-266ENST00000628689 ERICH3Q5RHP9 1530 aa13.32□□□□□ -0.28
TCF4-266ENST00000628689 ABCC2Q92887 1545 aa13.32□□□□□ -0.28
TCF4-266ENST00000628689 PTPRMP28827 1452 aa13.31□□□□□ -0.28
TCF4-266ENST00000628689 SCAF1Q9H7N4 1312 aaKnown RBP13.31□□□□□ -0.28
TCF4-266ENST00000628689 MAP3K4Q9Y6R4 1608 aa13.31□□□□□ -0.28
TCF4-266ENST00000628689 PTPRGP23470 1445 aa13.3□□□□□ -0.28
TCF4-266ENST00000628689 WRNQ14191 1432 aaPredicted RBP eCLIP13.3□□□□□ -0.28
TCF4-266ENST00000628689 TTBK1Q5TCY1 1321 aaPredicted RBP13.3□□□□□ -0.28
TCF4-266ENST00000628689 PCF11O94913 1555 aaKnown RBP13.29□□□□□ -0.28
TCF4-266ENST00000628689 EPRSP07814 1512 aaKnown RBP13.29□□□□□ -0.28
TCF4-266ENST00000628689 KIF21BO75037 1637 aa13.27□□□□□ -0.29
TCF4-266ENST00000628689 HSPA2P54652 639 aa13.26□□□□□ -0.29
TCF4-266ENST00000628689 CUL7Q14999 1698 aa13.24□□□□□ -0.29
TCF4-266ENST00000628689 ADAMTSL3P82987 1691 aa13.24□□□□□ -0.29
TCF4-266ENST00000628689 KIAA0586Q9BVV6 1533 aa13.23□□□□□ -0.29
TCF4-266ENST00000628689 UHRF1BP1LA0JNW5 1464 aa13.19□□□□□ -0.3
TCF4-266ENST00000628689 TNIKQ9UKE5 1360 aa13.19□□□□□ -0.3
TCF4-266ENST00000628689 MAPK8IP2Q13387 824 aaPredicted RBP13.18□□□□□ -0.3
TCF4-266ENST00000628689 UACAQ9BZF9 1416 aa13.16□□□□□ -0.3
TCF4-266ENST00000628689 KDM5BQ9UGL1 1544 aa13.15□□□□□ -0.3
TCF4-266ENST00000628689 CD109Q6YHK3 1445 aa13.13□□□□□ -0.31
TCF4-266ENST00000628689 MAGI3Q5TCQ9 1506 aa13.13□□□□□ -0.31
TCF4-266ENST00000628689 CARMIL2Q6F5E8 1435 aa13.12□□□□□ -0.31
TCF4-266ENST00000628689 MADDQ8WXG6 1647 aa13.11□□□□□ -0.31
TCF4-266ENST00000628689 KCNA4P22459 653 aa13.11□□□□□ -0.31
TCF4-266ENST00000628689 BIVM-ERCC5R4GMW8 1640 aa13.1□□□□□ -0.31
TCF4-266ENST00000628689 BCORL1Q5H9F3 1711 aa13.1□□□□□ -0.31
TCF4-266ENST00000628689 ZCCHC11Q5TAX3 1644 aaKnown RBP13.1□□□□□ -0.31
TCF4-266ENST00000628689 NCBP3Q53F19 620 aaKnown RBP13.08□□□□□ -0.32
TCF4-266ENST00000628689 WDR7Q9Y4E6 1490 aa13.08□□□□□ -0.32
TCF4-266ENST00000628689 ARID4BQ4LE39 1312 aaPredicted RBP13.08□□□□□ -0.32
TCF4-266ENST00000628689 KCNH8Q96L42 1107 aa13.07□□□□□ -0.32
TCF4-266ENST00000628689 CNKSR2Q8WXI2 1034 aa13.06□□□□□ -0.32
TCF4-266ENST00000628689 ARAP3Q8WWN8 1544 aa13.06□□□□□ -0.32
TCF4-266ENST00000628689 RIMS1Q86UR5 1692 aaKnown RBP13.05□□□□□ -0.32
TCF4-266ENST00000628689 CFAP43Q8NDM7 1665 aa13.05□□□□□ -0.32
TCF4-266ENST00000628689 IGF1RP08069 1367 aa13.03□□□□□ -0.32
TCF4-266ENST00000628689 RAPGEF3O95398 923 aa13.02□□□□□ -0.33
TCF4-266ENST00000628689 DMRT2Q9Y5R5 561 aa13.02□□□□□ -0.33
TCF4-266ENST00000628689 DISP1Q96F81 1524 aa12.99□□□□□ -0.33
TCF4-266ENST00000628689 YEATS2Q9ULM3 1422 aa12.98□□□□□ -0.33
TCF4-266ENST00000628689 STRCQ7RTU9 1775 aa12.97□□□□□ -0.33
TCF4-266ENST00000628689 IQGAP2Q13576 1575 aa12.94□□□□□ -0.34
TCF4-266ENST00000628689 PHLDB1Q86UU1 1377 aa12.94□□□□□ -0.34
TCF4-266ENST00000628689 LTBP4Q8N2S1 1624 aa12.91□□□□□ -0.34
TCF4-266ENST00000628689 CARMIL1Q5VZK9 1371 aa12.9□□□□□ -0.34
TCF4-266ENST00000628689 IQSEC2Q5JU85 1478 aa12.9□□□□□ -0.34
TCF4-266ENST00000628689 NPM3O75607 178 aaKnown RBP12.88□□□□□ -0.35
TCF4-266ENST00000628689 FRMPD1Q5SYB0 1578 aa12.88□□□□□ -0.35
TCF4-266ENST00000628689 PTPRTO14522 1441 aa12.88□□□□□ -0.35
TCF4-266ENST00000628689 UBAP1LF5GYI3 381 aa12.86□□□□□ -0.35
TCF4-266ENST00000628689 MLECQ14165 292 aa12.86□□□□□ -0.35
TCF4-266ENST00000628689 POGZQ7Z3K3 1410 aa12.86□□□□□ -0.35
TCF4-266ENST00000628689 KIF27Q86VH2 1401 aa12.86□□□□□ -0.35
TCF4-266ENST00000628689 MED1Q15648 1581 aaPredicted RBP12.86□□□□□ -0.35
TCF4-266ENST00000628689 UGGT2Q9NYU1 1516 aa12.85□□□□□ -0.35
TCF4-266ENST00000628689 CEBPAP49715 358 aaPredicted RBP12.85□□□□□ -0.35
TCF4-266ENST00000628689 PREX1Q8TCU6 1659 aa12.85□□□□□ -0.35
TCF4-266ENST00000628689 SETD1BQ9UPS6 1966 aaKnown RBP12.85□□□□□ -0.35
TCF4-266ENST00000628689 NEO1Q92859 1461 aa12.84□□□□□ -0.35
TCF4-266ENST00000628689 KIAA0556O60303 1618 aa12.84□□□□□ -0.35
TCF4-266ENST00000628689 ARHGEF40Q8TER5 1519 aa12.83□□□□□ -0.35
TCF4-266ENST00000628689 SIGLEC1Q9BZZ2 1709 aa12.82□□□□□ -0.36
TCF4-266ENST00000628689 TTC37Q6PGP7 1564 aa12.82□□□□□ -0.36
TCF4-266ENST00000628689 FER1L4A9Z1Z3 1794 aa12.81□□□□□ -0.36
TCF4-266ENST00000628689 FANCAO15360 1455 aa12.81□□□□□ -0.36
TCF4-266ENST00000628689 ABCA8O94911 1581 aa12.81□□□□□ -0.36
TCF4-266ENST00000628689 HSPA1LP34931 641 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms