RNA–Protein interactions for RNA: ENST00000628397.2

CCDC163-205, Transcript of coiled-coil domain containing 163, humanhuman

TSL 3

Gene CCDC163, Length 885 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-205ENST00000628397 NUP160Q12769 1436 aa19.87■□□□□ 0.77
CCDC163-205ENST00000628397 LOC105371045A0A1W2PR82 267 aa19.85■□□□□ 0.77
CCDC163-205ENST00000628397 IQGAP2Q13576 1575 aa19.83■□□□□ 0.76
CCDC163-205ENST00000628397 KIAA0586Q9BVV6 1533 aa19.81■□□□□ 0.76
CCDC163-205ENST00000628397 TNIKQ9UKE5 1360 aa19.8■□□□□ 0.76
CCDC163-205ENST00000628397 CLASP1Q7Z460 1538 aa19.79■□□□□ 0.76
CCDC163-205ENST00000628397 OSCARQ8IYS5 282 aa19.76■□□□□ 0.75
CCDC163-205ENST00000628397 SHROOM2Q13796 1616 aa19.71■□□□□ 0.75
CCDC163-205ENST00000628397 RANGAP1P46060 587 aaPredicted RBP19.69■□□□□ 0.74
CCDC163-205ENST00000628397 UGGT2Q9NYU1 1516 aa19.69■□□□□ 0.74
CCDC163-205ENST00000628397 CEP162Q5TB80 1403 aa19.68■□□□□ 0.74
CCDC163-205ENST00000628397 EFCAB5A4FU69 1503 aa19.66■□□□□ 0.74
CCDC163-205ENST00000628397 SAMD9Q5K651 1589 aa19.65■□□□□ 0.74
CCDC163-205ENST00000628397 JPH4Q96JJ6 628 aa19.64■□□□□ 0.73
CCDC163-205ENST00000628397 CLIP1P30622 1438 aa19.64■□□□□ 0.73
CCDC163-205ENST00000628397 KIAA0556O60303 1618 aa19.63■□□□□ 0.73
CCDC163-205ENST00000628397 CARMIL2Q6F5E8 1435 aa19.6■□□□□ 0.73
CCDC163-205ENST00000628397 PRG4Q92954 1404 aaPredicted RBP19.6■□□□□ 0.73
CCDC163-205ENST00000628397 DISP1Q96F81 1524 aa19.59■□□□□ 0.73
CCDC163-205ENST00000628397 ARHGAP35Q9NRY4 1499 aa19.59■□□□□ 0.73
CCDC163-205ENST00000628397 ERCC6L2Q5T890 1561 aa19.56■□□□□ 0.72
CCDC163-205ENST00000628397 FHOD3Q2V2M9 1422 aa19.53■□□□□ 0.72
CCDC163-205ENST00000628397 P3H3Q8IVL6 736 aa19.53■□□□□ 0.72
CCDC163-205ENST00000628397 ARAP1Q96P48 1450 aa19.51■□□□□ 0.71
CCDC163-205ENST00000628397 ARHGEF11O15085 1522 aa19.51■□□□□ 0.71
CCDC163-205ENST00000628397 SENP3Q9H4L4 574 aaPredicted RBP19.49■□□□□ 0.71
CCDC163-205ENST00000628397 RIMBP3CA6NJZ7 1639 aa19.48■□□□□ 0.71
CCDC163-205ENST00000628397 RIMBP3BA6NNM3 1639 aa19.48■□□□□ 0.71
CCDC163-205ENST00000628397 RIMBP3Q9UFD9 1639 aa19.48■□□□□ 0.71
CCDC163-205ENST00000628397 TTBK1Q5TCY1 1321 aaPredicted RBP19.45■□□□□ 0.7
CCDC163-205ENST00000628397 FMN1Q68DA7 1419 aa19.44■□□□□ 0.7
CCDC163-205ENST00000628397 PTPRGP23470 1445 aa19.42■□□□□ 0.7
CCDC163-205ENST00000628397 VPS8Q8N3P4 1428 aa19.41■□□□□ 0.7
CCDC163-205ENST00000628397 PCF11O94913 1555 aaKnown RBP19.4■□□□□ 0.7
CCDC163-205ENST00000628397 RAPGEF6Q8TEU7 1601 aa19.39■□□□□ 0.69
CCDC163-205ENST00000628397 HECW1Q76N89 1606 aa19.36■□□□□ 0.69
CCDC163-205ENST00000628397 ABCA8O94911 1581 aa19.36■□□□□ 0.69
CCDC163-205ENST00000628397 PLB1Q6P1J6 1458 aa19.35■□□□□ 0.69
CCDC163-205ENST00000628397 FYCO1Q9BQS8 1478 aa19.35■□□□□ 0.69
CCDC163-205ENST00000628397 CASKIN1Q8WXD9 1431 aa19.33■□□□□ 0.68
CCDC163-205ENST00000628397 UACAQ9BZF9 1416 aa19.32■□□□□ 0.68
CCDC163-205ENST00000628397 ABCC2Q92887 1545 aa19.31■□□□□ 0.68
CCDC163-205ENST00000628397 DNAJC5Q9H3Z4 198 aa19.29■□□□□ 0.68
CCDC163-205ENST00000628397 ADCY10Q96PN6 1610 aa19.29■□□□□ 0.68
CCDC163-205ENST00000628397 LRRIQ1Q96JM4 1722 aa19.28■□□□□ 0.68
CCDC163-205ENST00000628397 ATP1B4Q9UN42 357 aaPredicted RBP19.28■□□□□ 0.68
CCDC163-205ENST00000628397 UHRF1BP1LA0JNW5 1464 aa19.27■□□□□ 0.67
CCDC163-205ENST00000628397 NUP153P49790 1475 aaKnown RBP19.26■□□□□ 0.67
CCDC163-205ENST00000628397 CFAP43Q8NDM7 1665 aa19.25■□□□□ 0.67
CCDC163-205ENST00000628397 CCDC18Q5T9S5 1454 aa19.24■□□□□ 0.67
CCDC163-205ENST00000628397 CYB5RLQ6IPT4 315 aa19.24■□□□□ 0.67
CCDC163-205ENST00000628397 EPRSP07814 1512 aaKnown RBP19.22■□□□□ 0.67
CCDC163-205ENST00000628397 PHF23Q9BUL5 403 aaPredicted RBP19.22■□□□□ 0.67
CCDC163-205ENST00000628397 ZCCHC11Q5TAX3 1644 aaKnown RBP19.22■□□□□ 0.67
CCDC163-205ENST00000628397 CDK13Q14004 1512 aaKnown RBP19.21■□□□□ 0.67
CCDC163-205ENST00000628397 TIAM1Q13009 1591 aa19.19■□□□□ 0.66
CCDC163-205ENST00000628397 ARID3CA6NKF2 412 aa19.19■□□□□ 0.66
CCDC163-205ENST00000628397 APLP2Q06481 763 aa19.19■□□□□ 0.66
CCDC163-205ENST00000628397 KDM5BQ9UGL1 1544 aa19.18■□□□□ 0.66
CCDC163-205ENST00000628397 MAP3K1Q13233 1512 aa19.16■□□□□ 0.66
CCDC163-205ENST00000628397 ATP10BO94823 1461 aa19.16■□□□□ 0.66
CCDC163-205ENST00000628397 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.15■□□□□ 0.66
CCDC163-205ENST00000628397 HNRNPUL2Q1KMD3 747 aaKnown RBP19.15■□□□□ 0.66
CCDC163-205ENST00000628397 NPM1P06748 294 aaKnown RBP eCLIP19.12■□□□□ 0.65
CCDC163-205ENST00000628397 EHBP1L1Q8N3D4 1523 aa19.1■□□□□ 0.65
CCDC163-205ENST00000628397 CDK11AQ9UQ88 783 aaPredicted RBP19.08■□□□□ 0.64
CCDC163-205ENST00000628397 MTUS2Q5JR59 1369 aa19.07■□□□□ 0.64
CCDC163-205ENST00000628397 MAGI3Q5TCQ9 1506 aa19.07■□□□□ 0.64
CCDC163-205ENST00000628397 LRRC9Q6ZRR7 1453 aa19.07■□□□□ 0.64
CCDC163-205ENST00000628397 MAPKBP1O60336 1514 aa19.05■□□□□ 0.64
CCDC163-205ENST00000628397 TROQ12816 1431 aaPredicted RBP19.04■□□□□ 0.64
CCDC163-205ENST00000628397 WDR7Q9Y4E6 1490 aa19.03■□□□□ 0.64
CCDC163-205ENST00000628397 SUPT6HQ7KZ85 1726 aaKnown RBP19.03■□□□□ 0.64
CCDC163-205ENST00000628397 ASXL2Q76L83 1435 aa19.03■□□□□ 0.64
CCDC163-205ENST00000628397 PLEKHD1A6NEE1 506 aa19.03■□□□□ 0.64
CCDC163-205ENST00000628397 KIF14Q15058 1648 aa19.03■□□□□ 0.64
CCDC163-205ENST00000628397 KANK4Q5T7N3 995 aaPredicted RBP19■□□□□ 0.63
CCDC163-205ENST00000628397 PPARGC1BQ86YN6 1023 aaKnown RBP18.99■□□□□ 0.63
CCDC163-205ENST00000628397 NCOA2Q15596 1464 aa18.94■□□□□ 0.62
CCDC163-205ENST00000628397 KCNH8Q96L42 1107 aa18.92■□□□□ 0.62
CCDC163-205ENST00000628397 TTC37Q6PGP7 1564 aa18.92■□□□□ 0.62
CCDC163-205ENST00000628397 ITSN2Q9NZM3 1697 aa18.92■□□□□ 0.62
CCDC163-205ENST00000628397 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.91■□□□□ 0.62
CCDC163-205ENST00000628397 DIP2BQ9P265 1576 aa18.91■□□□□ 0.62
CCDC163-205ENST00000628397 ABCA9Q8IUA7 1624 aa18.91■□□□□ 0.62
CCDC163-205ENST00000628397 MYO5CQ9NQX4 1742 aa18.91■□□□□ 0.62
CCDC163-205ENST00000628397 ABCC10Q5T3U5 1492 aa18.89■□□□□ 0.61
CCDC163-205ENST00000628397 CDC42BPAQ5VT25 1732 aa18.88■□□□□ 0.61
CCDC163-205ENST00000628397 KIF13AQ9H1H9 1805 aa18.88■□□□□ 0.61
CCDC163-205ENST00000628397 GLI2P10070 1586 aa18.87■□□□□ 0.61
CCDC163-205ENST00000628397 PREX2Q70Z35 1606 aa18.86■□□□□ 0.61
CCDC163-205ENST00000628397 CCNB3Q8WWL7 1395 aa18.86■□□□□ 0.61
CCDC163-205ENST00000628397 MAP3K4Q9Y6R4 1608 aa18.84■□□□□ 0.61
CCDC163-205ENST00000628397 PHLDB1Q86UU1 1377 aa18.83■□□□□ 0.61
CCDC163-205ENST00000628397 CDC42BPBQ9Y5S2 1711 aa18.83■□□□□ 0.6
CCDC163-205ENST00000628397 MYOM3Q5VTT5 1437 aa18.83■□□□□ 0.6
CCDC163-205ENST00000628397 GPATCH8Q9UKJ3 1502 aaKnown RBP18.8■□□□□ 0.6
CCDC163-205ENST00000628397 FAM69CQ0P6D2 419 aa18.8■□□□□ 0.6
CCDC163-205ENST00000628397 ARHGAP5Q13017 1502 aa18.79■□□□□ 0.6
CCDC163-205ENST00000628397 TSPOAP1O95153 1857 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms