RNA–Protein interactions for RNA: ENST00000627960.1

UBR1-212, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5 BASIC

Gene UBR1, Length 189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-212ENST00000627960 RUSC2Q8N2Y8 1516 aa20.94■□□□□ 0.94
UBR1-212ENST00000627960 PRG4Q92954 1404 aaPredicted RBP20.94■□□□□ 0.94
UBR1-212ENST00000627960 CARMIL1Q5VZK9 1371 aa20.87■□□□□ 0.93
UBR1-212ENST00000627960 KIAA0586Q9BVV6 1533 aa20.87■□□□□ 0.93
UBR1-212ENST00000627960 RAPGEF2Q9Y4G8 1499 aa20.7■□□□□ 0.9
UBR1-212ENST00000627960 IQGAP2Q13576 1575 aa20.69■□□□□ 0.9
UBR1-212ENST00000627960 ADCY10Q96PN6 1610 aa20.68■□□□□ 0.9
UBR1-212ENST00000627960 KIF13AQ9H1H9 1805 aa20.67■□□□□ 0.9
UBR1-212ENST00000627960 NPM1P06748 294 aaKnown RBP eCLIP20.67■□□□□ 0.9
UBR1-212ENST00000627960 CARMIL2Q6F5E8 1435 aa20.65■□□□□ 0.9
UBR1-212ENST00000627960 PTPRGP23470 1445 aa20.64■□□□□ 0.89
UBR1-212ENST00000627960 TNIKQ9UKE5 1360 aa20.62■□□□□ 0.89
UBR1-212ENST00000627960 MAPKBP1O60336 1514 aa20.62■□□□□ 0.89
UBR1-212ENST00000627960 DISP1Q96F81 1524 aa20.58■□□□□ 0.89
UBR1-212ENST00000627960 TTBK1Q5TCY1 1321 aaPredicted RBP20.58■□□□□ 0.89
UBR1-212ENST00000627960 UGGT2Q9NYU1 1516 aa20.58■□□□□ 0.88
UBR1-212ENST00000627960 ABCC10Q5T3U5 1492 aa20.57■□□□□ 0.88
UBR1-212ENST00000627960 CTTNBP2Q8WZ74 1663 aa20.55■□□□□ 0.88
UBR1-212ENST00000627960 FAM69CQ0P6D2 419 aa20.55■□□□□ 0.88
UBR1-212ENST00000627960 PRXQ9BXM0 1461 aa20.54■□□□□ 0.88
UBR1-212ENST00000627960 DIP2BQ9P265 1576 aa20.52■□□□□ 0.88
UBR1-212ENST00000627960 UHRF1BP1LA0JNW5 1464 aa20.5■□□□□ 0.87
UBR1-212ENST00000627960 KIAA0556O60303 1618 aa20.5■□□□□ 0.87
UBR1-212ENST00000627960 ABCC2Q92887 1545 aa20.5■□□□□ 0.87
UBR1-212ENST00000627960 UACAQ9BZF9 1416 aa20.49■□□□□ 0.87
UBR1-212ENST00000627960 CSRNP3Q8WYN3 585 aa20.44■□□□□ 0.86
UBR1-212ENST00000627960 GOLGA3Q08378 1498 aa20.43■□□□□ 0.86
UBR1-212ENST00000627960 TSPOAP1O95153 1857 aa20.41■□□□□ 0.86
UBR1-212ENST00000627960 ASXL2Q76L83 1435 aa20.41■□□□□ 0.86
UBR1-212ENST00000627960 PLB1Q6P1J6 1458 aa20.4■□□□□ 0.86
UBR1-212ENST00000627960 KDM5BQ9UGL1 1544 aa20.4■□□□□ 0.86
UBR1-212ENST00000627960 EEA1Q15075 1411 aa20.37■□□□□ 0.85
UBR1-212ENST00000627960 ZCCHC11Q5TAX3 1644 aaKnown RBP20.37■□□□□ 0.85
UBR1-212ENST00000627960 GLI2P10070 1586 aa20.36■□□□□ 0.85
UBR1-212ENST00000627960 ABCA8O94911 1581 aa20.32■□□□□ 0.84
UBR1-212ENST00000627960 KDM6BO15054 1643 aa20.3■□□□□ 0.84
UBR1-212ENST00000627960 EPRSP07814 1512 aaKnown RBP20.29■□□□□ 0.84
UBR1-212ENST00000627960 PPRC1Q5VV67 1664 aaKnown RBP20.29■□□□□ 0.84
UBR1-212ENST00000627960 FAM9AQ8IZU1 332 aaPredicted RBP20.27■□□□□ 0.84
UBR1-212ENST00000627960 AEBP2Q6ZN18 517 aaPredicted RBP20.26■□□□□ 0.83
UBR1-212ENST00000627960 P3H3Q8IVL6 736 aa20.26■□□□□ 0.83
UBR1-212ENST00000627960 SAMD9Q5K651 1589 aa20.25■□□□□ 0.83
UBR1-212ENST00000627960 MAP3K4Q9Y6R4 1608 aa20.25■□□□□ 0.83
UBR1-212ENST00000627960 WDR7Q9Y4E6 1490 aa20.24■□□□□ 0.83
UBR1-212ENST00000627960 CHIC1Q5VXU3 224 aa20.23■□□□□ 0.83
UBR1-212ENST00000627960 KIF21BO75037 1637 aa20.2■□□□□ 0.82
UBR1-212ENST00000627960 KCNH8Q96L42 1107 aa20.16■□□□□ 0.82
UBR1-212ENST00000627960 TEX14Q8IWB6 1497 aa20.16■□□□□ 0.82
UBR1-212ENST00000627960 RANGAP1P46060 587 aaPredicted RBP20.15■□□□□ 0.82
UBR1-212ENST00000627960 ATP10BO94823 1461 aa20.15■□□□□ 0.82
UBR1-212ENST00000627960 CFAP43Q8NDM7 1665 aa20.13■□□□□ 0.81
UBR1-212ENST00000627960 RAPGEF6Q8TEU7 1601 aa20.13■□□□□ 0.81
UBR1-212ENST00000627960 ARID3CA6NKF2 412 aa20.13■□□□□ 0.81
UBR1-212ENST00000627960 COL17A1Q9UMD9 1497 aaPredicted RBP20.11■□□□□ 0.81
UBR1-212ENST00000627960 CD109Q6YHK3 1445 aa20.1■□□□□ 0.81
UBR1-212ENST00000627960 FHOD3Q2V2M9 1422 aa20.1■□□□□ 0.81
UBR1-212ENST00000627960 MAGI3Q5TCQ9 1506 aa20.08■□□□□ 0.81
UBR1-212ENST00000627960 EFCAB5A4FU69 1503 aa20.07■□□□□ 0.8
UBR1-212ENST00000627960 NUP153P49790 1475 aaKnown RBP20.05■□□□□ 0.8
UBR1-212ENST00000627960 UBTFP17480 764 aaKnown RBP20.04■□□□□ 0.8
UBR1-212ENST00000627960 EHMT2Q96KQ7 1210 aa20.04■□□□□ 0.8
UBR1-212ENST00000627960 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.03■□□□□ 0.8
UBR1-212ENST00000627960 HNRNPUL2Q1KMD3 747 aaKnown RBP20.03■□□□□ 0.8
UBR1-212ENST00000627960 KDM4FA0A1W2PPD8 638 aa20.01■□□□□ 0.79
UBR1-212ENST00000627960 ABCA9Q8IUA7 1624 aa20.01■□□□□ 0.79
UBR1-212ENST00000627960 PLEKHD1A6NEE1 506 aa19.94■□□□□ 0.78
UBR1-212ENST00000627960 ARAP3Q8WWN8 1544 aa19.93■□□□□ 0.78
UBR1-212ENST00000627960 ARHGAP35Q9NRY4 1499 aa19.92■□□□□ 0.78
UBR1-212ENST00000627960 PHLDB1Q86UU1 1377 aa19.91■□□□□ 0.78
UBR1-212ENST00000627960 ADGRL1O94910 1474 aa19.89■□□□□ 0.77
UBR1-212ENST00000627960 FMN1Q68DA7 1419 aa19.89■□□□□ 0.77
UBR1-212ENST00000627960 NEO1Q92859 1461 aa19.87■□□□□ 0.77
UBR1-212ENST00000627960 CDK13Q14004 1512 aaKnown RBP19.86■□□□□ 0.77
UBR1-212ENST00000627960 HECW1Q76N89 1606 aa19.84■□□□□ 0.77
UBR1-212ENST00000627960 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.84■□□□□ 0.77
UBR1-212ENST00000627960 ATP1B4Q9UN42 357 aaPredicted RBP19.83■□□□□ 0.77
UBR1-212ENST00000627960 RAPGEF3O95398 923 aa19.81■□□□□ 0.76
UBR1-212ENST00000627960 TTC37Q6PGP7 1564 aa19.8■□□□□ 0.76
UBR1-212ENST00000627960 AKNAQ7Z591 1439 aa19.77■□□□□ 0.76
UBR1-212ENST00000627960 CDK11AQ9UQ88 783 aaPredicted RBP19.77■□□□□ 0.76
UBR1-212ENST00000627960 FRMPD1Q5SYB0 1578 aa19.77■□□□□ 0.76
UBR1-212ENST00000627960 CFAP74Q9C0B2 1584 aa19.77■□□□□ 0.76
UBR1-212ENST00000627960 LRRIQ1Q96JM4 1722 aa19.76■□□□□ 0.75
UBR1-212ENST00000627960 FANCAO15360 1455 aa19.76■□□□□ 0.75
UBR1-212ENST00000627960 DENND4BO75064 1496 aaPredicted RBP19.73■□□□□ 0.75
UBR1-212ENST00000627960 RICTORQ6R327 1708 aa19.73■□□□□ 0.75
UBR1-212ENST00000627960 PLCH2O75038 1416 aa19.72■□□□□ 0.75
UBR1-212ENST00000627960 CASKIN1Q8WXD9 1431 aa19.71■□□□□ 0.75
UBR1-212ENST00000627960 TROQ12816 1431 aaPredicted RBP19.7■□□□□ 0.74
UBR1-212ENST00000627960 MYO5CQ9NQX4 1742 aa19.7■□□□□ 0.74
UBR1-212ENST00000627960 KIF14Q15058 1648 aa19.69■□□□□ 0.74
UBR1-212ENST00000627960 PCF11O94913 1555 aaKnown RBP19.69■□□□□ 0.74
UBR1-212ENST00000627960 CLIP1P30622 1438 aa19.68■□□□□ 0.74
UBR1-212ENST00000627960 CCDC18Q5T9S5 1454 aa19.66■□□□□ 0.74
UBR1-212ENST00000627960 EFCAB2Q5VUJ9 269 aa19.65■□□□□ 0.74
UBR1-212ENST00000627960 SCAPERQ9BY12 1400 aa19.64■□□□□ 0.73
UBR1-212ENST00000627960 ZMYM4Q5VZL5 1548 aa19.64■□□□□ 0.73
UBR1-212ENST00000627960 ARHGEF40Q8TER5 1519 aa19.64■□□□□ 0.73
UBR1-212ENST00000627960 ADAMTSL3P82987 1691 aa19.64■□□□□ 0.73
UBR1-212ENST00000627960 FYCO1Q9BQS8 1478 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms