RNA–Protein interactions for RNA: ENST00000627809.1

SPTAN1-213, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 3

Gene SPTAN1, Length 342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-213ENST00000627809 CARMIL1Q5VZK9 1371 aa13.99□□□□□ -0.17
SPTAN1-213ENST00000627809 ADCY10Q96PN6 1610 aa13.97□□□□□ -0.17
SPTAN1-213ENST00000627809 KIF13AQ9H1H9 1805 aa13.96□□□□□ -0.17
SPTAN1-213ENST00000627809 CTTNBP2Q8WZ74 1663 aa13.95□□□□□ -0.18
SPTAN1-213ENST00000627809 KIAA0586Q9BVV6 1533 aa13.95□□□□□ -0.18
SPTAN1-213ENST00000627809 IQGAP2Q13576 1575 aa13.93□□□□□ -0.18
SPTAN1-213ENST00000627809 JPH4Q96JJ6 628 aa13.93□□□□□ -0.18
SPTAN1-213ENST00000627809 DISP1Q96F81 1524 aa13.9□□□□□ -0.18
SPTAN1-213ENST00000627809 RAPGEF2Q9Y4G8 1499 aa13.9□□□□□ -0.18
SPTAN1-213ENST00000627809 PRXQ9BXM0 1461 aa13.88□□□□□ -0.19
SPTAN1-213ENST00000627809 KIAA0556O60303 1618 aa13.86□□□□□ -0.19
SPTAN1-213ENST00000627809 TTBK1Q5TCY1 1321 aaPredicted RBP13.85□□□□□ -0.19
SPTAN1-213ENST00000627809 TRHP20396 242 aaPredicted RBP13.84□□□□□ -0.19
SPTAN1-213ENST00000627809 UGGT2Q9NYU1 1516 aa13.84□□□□□ -0.19
SPTAN1-213ENST00000627809 CHIC1Q5VXU3 224 aa13.81□□□□□ -0.2
SPTAN1-213ENST00000627809 FAM9AQ8IZU1 332 aaPredicted RBP13.81□□□□□ -0.2
SPTAN1-213ENST00000627809 ABCC2Q92887 1545 aa13.8□□□□□ -0.2
SPTAN1-213ENST00000627809 DIP2BQ9P265 1576 aa13.79□□□□□ -0.2
SPTAN1-213ENST00000627809 TSPOAP1O95153 1857 aa13.79□□□□□ -0.2
SPTAN1-213ENST00000627809 PPRC1Q5VV67 1664 aaKnown RBP13.75□□□□□ -0.21
SPTAN1-213ENST00000627809 ZCCHC11Q5TAX3 1644 aaKnown RBP13.75□□□□□ -0.21
SPTAN1-213ENST00000627809 EHMT2Q96KQ7 1210 aa13.75□□□□□ -0.21
SPTAN1-213ENST00000627809 PLB1Q6P1J6 1458 aa13.74□□□□□ -0.21
SPTAN1-213ENST00000627809 SAMD9Q5K651 1589 aa13.74□□□□□ -0.21
SPTAN1-213ENST00000627809 MAPKBP1O60336 1514 aa13.74□□□□□ -0.21
SPTAN1-213ENST00000627809 PTPRGP23470 1445 aa13.73□□□□□ -0.21
SPTAN1-213ENST00000627809 TNIKQ9UKE5 1360 aa13.72□□□□□ -0.21
SPTAN1-213ENST00000627809 KIF21BO75037 1637 aa13.72□□□□□ -0.21
SPTAN1-213ENST00000627809 ABCA8O94911 1581 aa13.71□□□□□ -0.21
SPTAN1-213ENST00000627809 CSRNP3Q8WYN3 585 aa13.7□□□□□ -0.22
SPTAN1-213ENST00000627809 ABCC10Q5T3U5 1492 aa13.69□□□□□ -0.22
SPTAN1-213ENST00000627809 CARMIL2Q6F5E8 1435 aa13.68□□□□□ -0.22
SPTAN1-213ENST00000627809 P3H3Q8IVL6 736 aa13.68□□□□□ -0.22
SPTAN1-213ENST00000627809 UACAQ9BZF9 1416 aa13.67□□□□□ -0.22
SPTAN1-213ENST00000627809 UHRF1BP1LA0JNW5 1464 aa13.67□□□□□ -0.22
SPTAN1-213ENST00000627809 KDM5BQ9UGL1 1544 aa13.66□□□□□ -0.22
SPTAN1-213ENST00000627809 RANGAP1P46060 587 aaPredicted RBP13.66□□□□□ -0.22
SPTAN1-213ENST00000627809 ASXL2Q76L83 1435 aa13.65□□□□□ -0.22
SPTAN1-213ENST00000627809 FHOD3Q2V2M9 1422 aa13.64□□□□□ -0.23
SPTAN1-213ENST00000627809 ARID3CA6NKF2 412 aa13.63□□□□□ -0.23
SPTAN1-213ENST00000627809 LRRIQ1Q96JM4 1722 aa13.63□□□□□ -0.23
SPTAN1-213ENST00000627809 EEA1Q15075 1411 aa13.62□□□□□ -0.23
SPTAN1-213ENST00000627809 MAP3K4Q9Y6R4 1608 aa13.61□□□□□ -0.23
SPTAN1-213ENST00000627809 FAM69CQ0P6D2 419 aa13.61□□□□□ -0.23
SPTAN1-213ENST00000627809 RAPGEF6Q8TEU7 1601 aa13.6□□□□□ -0.23
SPTAN1-213ENST00000627809 EPRSP07814 1512 aaKnown RBP13.59□□□□□ -0.23
SPTAN1-213ENST00000627809 GOLGA3Q08378 1498 aa13.58□□□□□ -0.24
SPTAN1-213ENST00000627809 GLI2P10070 1586 aa13.58□□□□□ -0.24
SPTAN1-213ENST00000627809 COL17A1Q9UMD9 1497 aaPredicted RBP13.57□□□□□ -0.24
SPTAN1-213ENST00000627809 NUP153P49790 1475 aaKnown RBP13.56□□□□□ -0.24
SPTAN1-213ENST00000627809 ATP10BO94823 1461 aa13.55□□□□□ -0.24
SPTAN1-213ENST00000627809 ARHGAP35Q9NRY4 1499 aa13.55□□□□□ -0.24
SPTAN1-213ENST00000627809 KDM6BO15054 1643 aa13.54□□□□□ -0.24
SPTAN1-213ENST00000627809 WDR7Q9Y4E6 1490 aa13.54□□□□□ -0.24
SPTAN1-213ENST00000627809 NPM1P06748 294 aaKnown RBP eCLIP13.52□□□□□ -0.25
SPTAN1-213ENST00000627809 CDK13Q14004 1512 aaKnown RBP13.52□□□□□ -0.25
SPTAN1-213ENST00000627809 CFAP43Q8NDM7 1665 aa13.49□□□□□ -0.25
SPTAN1-213ENST00000627809 EFCAB5A4FU69 1503 aa13.49□□□□□ -0.25
SPTAN1-213ENST00000627809 PCF11O94913 1555 aaKnown RBP13.46□□□□□ -0.25
SPTAN1-213ENST00000627809 TTC37Q6PGP7 1564 aa13.46□□□□□ -0.25
SPTAN1-213ENST00000627809 ABCA9Q8IUA7 1624 aa13.46□□□□□ -0.26
SPTAN1-213ENST00000627809 UBTFP17480 764 aaKnown RBP13.44□□□□□ -0.26
SPTAN1-213ENST00000627809 KCNH8Q96L42 1107 aa13.44□□□□□ -0.26
SPTAN1-213ENST00000627809 KIF14Q15058 1648 aa13.43□□□□□ -0.26
SPTAN1-213ENST00000627809 MAGI3Q5TCQ9 1506 aa13.42□□□□□ -0.26
SPTAN1-213ENST00000627809 FRMPD1Q5SYB0 1578 aa13.41□□□□□ -0.26
SPTAN1-213ENST00000627809 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.39□□□□□ -0.27
SPTAN1-213ENST00000627809 SIGLEC1Q9BZZ2 1709 aa13.39□□□□□ -0.27
SPTAN1-213ENST00000627809 HECW1Q76N89 1606 aa13.38□□□□□ -0.27
SPTAN1-213ENST00000627809 CD109Q6YHK3 1445 aa13.38□□□□□ -0.27
SPTAN1-213ENST00000627809 RICTORQ6R327 1708 aa13.33□□□□□ -0.27
SPTAN1-213ENST00000627809 LOC105371045A0A1W2PR82 267 aa13.33□□□□□ -0.28
SPTAN1-213ENST00000627809 KDM4FA0A1W2PPD8 638 aa13.32□□□□□ -0.28
SPTAN1-213ENST00000627809 CDC42BPBQ9Y5S2 1711 aa13.32□□□□□ -0.28
SPTAN1-213ENST00000627809 TEX14Q8IWB6 1497 aa13.31□□□□□ -0.28
SPTAN1-213ENST00000627809 CLIP1P30622 1438 aa13.3□□□□□ -0.28
SPTAN1-213ENST00000627809 MYO5CQ9NQX4 1742 aa13.3□□□□□ -0.28
SPTAN1-213ENST00000627809 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.3□□□□□ -0.28
SPTAN1-213ENST00000627809 HNRNPUL2Q1KMD3 747 aaKnown RBP13.3□□□□□ -0.28
SPTAN1-213ENST00000627809 CDC42BPAQ5VT25 1732 aa13.29□□□□□ -0.28
SPTAN1-213ENST00000627809 ATP1B4Q9UN42 357 aaPredicted RBP13.28□□□□□ -0.28
SPTAN1-213ENST00000627809 FMN1Q68DA7 1419 aa13.28□□□□□ -0.28
SPTAN1-213ENST00000627809 CEP162Q5TB80 1403 aa13.27□□□□□ -0.29
SPTAN1-213ENST00000627809 ADGRL1O94910 1474 aa13.27□□□□□ -0.29
SPTAN1-213ENST00000627809 ARAP3Q8WWN8 1544 aa13.27□□□□□ -0.29
SPTAN1-213ENST00000627809 RAPGEF3O95398 923 aa13.26□□□□□ -0.29
SPTAN1-213ENST00000627809 CASKIN1Q8WXD9 1431 aa13.26□□□□□ -0.29
SPTAN1-213ENST00000627809 PREX2Q70Z35 1606 aa13.24□□□□□ -0.29
SPTAN1-213ENST00000627809 FANCAO15360 1455 aa13.23□□□□□ -0.29
SPTAN1-213ENST00000627809 FYCO1Q9BQS8 1478 aa13.23□□□□□ -0.29
SPTAN1-213ENST00000627809 TROQ12816 1431 aaPredicted RBP13.22□□□□□ -0.29
SPTAN1-213ENST00000627809 NEO1Q92859 1461 aa13.22□□□□□ -0.29
SPTAN1-213ENST00000627809 ARHGEF12Q9NZN5 1544 aa13.21□□□□□ -0.29
SPTAN1-213ENST00000627809 AKNAQ7Z591 1439 aa13.21□□□□□ -0.3
SPTAN1-213ENST00000627809 ARHGEF40Q8TER5 1519 aa13.2□□□□□ -0.3
SPTAN1-213ENST00000627809 YEATS2Q9ULM3 1422 aa13.2□□□□□ -0.3
SPTAN1-213ENST00000627809 ITSN2Q9NZM3 1697 aa13.19□□□□□ -0.3
SPTAN1-213ENST00000627809 PLEKHD1A6NEE1 506 aa13.19□□□□□ -0.3
SPTAN1-213ENST00000627809 SAMD9LQ8IVG5 1584 aa13.18□□□□□ -0.3
SPTAN1-213ENST00000627809 CFAP74Q9C0B2 1584 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms