RNA–Protein interactions for RNA: ENST00000627490.2

PBX1-222, Transcript of PBX homeobox 1, humanhuman

TSL 2 BASIC

Gene PBX1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-222ENST00000627490 SNAPC4Q5SXM2 1469 aa30.7■■■□□ 2.51
PBX1-222ENST00000627490 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.64■■■□□ 2.49
PBX1-222ENST00000627490 SYNJ2O15056 1496 aa30.59■■■□□ 2.49
PBX1-222ENST00000627490 CTTNBP2Q8WZ74 1663 aa30.57■■■□□ 2.48
PBX1-222ENST00000627490 GRIN2AQ12879 1464 aa30.52■■■□□ 2.48
PBX1-222ENST00000627490 CLIP1P30622 1438 aa30.5■■■□□ 2.47
PBX1-222ENST00000627490 VPS8Q8N3P4 1428 aa30.45■■■□□ 2.47
PBX1-222ENST00000627490 CHMP7Q8WUX9 453 aaPredicted RBP30.39■■■□□ 2.46
PBX1-222ENST00000627490 NUP160Q12769 1436 aa30.37■■■□□ 2.45
PBX1-222ENST00000627490 CHD1O14646 1710 aa30.36■■■□□ 2.45
PBX1-222ENST00000627490 IQGAP2Q13576 1575 aa30.34■■■□□ 2.45
PBX1-222ENST00000627490 KIAA0586Q9BVV6 1533 aa30.33■■■□□ 2.45
PBX1-222ENST00000627490 CEP170Q5SW79 1584 aa30.33■■■□□ 2.45
PBX1-222ENST00000627490 EFCAB5A4FU69 1503 aa30.3■■■□□ 2.44
PBX1-222ENST00000627490 ARHGAP35Q9NRY4 1499 aa30.28■■■□□ 2.44
PBX1-222ENST00000627490 TTBK1Q5TCY1 1321 aaPredicted RBP30.27■■■□□ 2.44
PBX1-222ENST00000627490 FBLN2P98095 1184 aa30.24■■■□□ 2.43
PBX1-222ENST00000627490 SAMD9Q5K651 1589 aa30.24■■■□□ 2.43
PBX1-222ENST00000627490 UGGT2Q9NYU1 1516 aa30.23■■■□□ 2.43
PBX1-222ENST00000627490 APLP2Q06481 763 aa30.22■■■□□ 2.43
PBX1-222ENST00000627490 ARAP1Q96P48 1450 aa30.21■■■□□ 2.43
PBX1-222ENST00000627490 DIEXFQ68CQ4 756 aaKnown RBP30.18■■■□□ 2.42
PBX1-222ENST00000627490 RANGAP1P46060 587 aaPredicted RBP30.13■■■□□ 2.41
PBX1-222ENST00000627490 SCAF1Q9H7N4 1312 aaKnown RBP30.09■■■□□ 2.41
PBX1-222ENST00000627490 CLASP1Q7Z460 1538 aa30.06■■■□□ 2.4
PBX1-222ENST00000627490 ZNF316A6NFI3 1004 aaPredicted RBP30.05■■■□□ 2.4
PBX1-222ENST00000627490 SHROOM2Q13796 1616 aa30.05■■■□□ 2.4
PBX1-222ENST00000627490 KIAA0556O60303 1618 aa30.04■■■□□ 2.4
PBX1-222ENST00000627490 DISP1Q96F81 1524 aa30.03■■■□□ 2.4
PBX1-222ENST00000627490 PELP1Q8IZL8 1130 aaKnown RBP30.02■■■□□ 2.4
PBX1-222ENST00000627490 FHOD3Q2V2M9 1422 aa30.01■■■□□ 2.39
PBX1-222ENST00000627490 ACIN1Q9UKV3 1341 aaKnown RBP30■■■□□ 2.39
PBX1-222ENST00000627490 JPH4Q96JJ6 628 aa29.99■■■□□ 2.39
PBX1-222ENST00000627490 FMN1Q68DA7 1419 aa29.97■■■□□ 2.39
PBX1-222ENST00000627490 CENPBP07199 599 aaPredicted RBP29.96■■■□□ 2.39
PBX1-222ENST00000627490 HNRNPUL2Q1KMD3 747 aaKnown RBP29.95■■■□□ 2.39
PBX1-222ENST00000627490 CLSPNQ9HAW4 1339 aa29.94■■■□□ 2.38
PBX1-222ENST00000627490 CARMIL2Q6F5E8 1435 aa29.94■■■□□ 2.38
PBX1-222ENST00000627490 P3H3Q8IVL6 736 aa29.9■■■□□ 2.38
PBX1-222ENST00000627490 FYCO1Q9BQS8 1478 aa29.87■■■□□ 2.37
PBX1-222ENST00000627490 PCF11O94913 1555 aaKnown RBP29.87■■■□□ 2.37
PBX1-222ENST00000627490 CASKIN1Q8WXD9 1431 aa29.86■■■□□ 2.37
PBX1-222ENST00000627490 PRG4Q92954 1404 aaPredicted RBP29.85■■■□□ 2.37
PBX1-222ENST00000627490 OSCARQ8IYS5 282 aa29.82■■■□□ 2.36
PBX1-222ENST00000627490 MAP3K1Q13233 1512 aa29.81■■■□□ 2.36
PBX1-222ENST00000627490 RRBP1Q9P2E9 1410 aaKnown RBP29.79■■■□□ 2.36
PBX1-222ENST00000627490 NEUROD1Q13562 356 aa29.77■■■□□ 2.36
PBX1-222ENST00000627490 HECW1Q76N89 1606 aa29.73■■■□□ 2.35
PBX1-222ENST00000627490 CFAP43Q8NDM7 1665 aa29.72■■■□□ 2.35
PBX1-222ENST00000627490 TIAM1Q13009 1591 aa29.7■■■□□ 2.35
PBX1-222ENST00000627490 RAPGEF6Q8TEU7 1601 aa29.7■■■□□ 2.34
PBX1-222ENST00000627490 ERCC6L2Q5T890 1561 aa29.69■■■□□ 2.34
PBX1-222ENST00000627490 LRRIQ1Q96JM4 1722 aa29.66■■■□□ 2.34
PBX1-222ENST00000627490 ABCA8O94911 1581 aa29.64■■■□□ 2.34
PBX1-222ENST00000627490 CCDC18Q5T9S5 1454 aa29.64■■■□□ 2.34
PBX1-222ENST00000627490 DHX57Q6P158 1386 aaKnown RBP29.64■■■□□ 2.34
PBX1-222ENST00000627490 KANK4Q5T7N3 995 aaPredicted RBP29.64■■■□□ 2.34
PBX1-222ENST00000627490 PTPRGP23470 1445 aa29.63■■■□□ 2.33
PBX1-222ENST00000627490 PLB1Q6P1J6 1458 aa29.58■■■□□ 2.33
PBX1-222ENST00000627490 NUP153P49790 1475 aaKnown RBP29.57■■■□□ 2.32
PBX1-222ENST00000627490 EPRSP07814 1512 aaKnown RBP29.57■■■□□ 2.32
PBX1-222ENST00000627490 CCNB3Q8WWL7 1395 aa29.57■■■□□ 2.32
PBX1-222ENST00000627490 LRRC9Q6ZRR7 1453 aa29.54■■■□□ 2.32
PBX1-222ENST00000627490 ATP1B4Q9UN42 357 aaPredicted RBP29.51■■■□□ 2.31
PBX1-222ENST00000627490 GTF3C3Q9Y5Q9 886 aa29.49■■■□□ 2.31
PBX1-222ENST00000627490 UACAQ9BZF9 1416 aa29.49■■■□□ 2.31
PBX1-222ENST00000627490 ABCC2Q92887 1545 aa29.46■■■□□ 2.31
PBX1-222ENST00000627490 UHRF1BP1LA0JNW5 1464 aa29.46■■■□□ 2.31
PBX1-222ENST00000627490 CDK13Q14004 1512 aaKnown RBP29.45■■■□□ 2.3
PBX1-222ENST00000627490 EHBP1L1Q8N3D4 1523 aa29.44■■■□□ 2.3
PBX1-222ENST00000627490 MIER1Q8N108 512 aa29.43■■■□□ 2.3
PBX1-222ENST00000627490 ARHGEF11O15085 1522 aa29.39■■■□□ 2.3
PBX1-222ENST00000627490 MAGI3Q5TCQ9 1506 aa29.37■■■□□ 2.29
PBX1-222ENST00000627490 ATP10BO94823 1461 aa29.37■■■□□ 2.29
PBX1-222ENST00000627490 MTUS2Q5JR59 1369 aa29.37■■■□□ 2.29
PBX1-222ENST00000627490 SUPT6HQ7KZ85 1726 aaKnown RBP29.33■■■□□ 2.29
PBX1-222ENST00000627490 CDK11AQ9UQ88 783 aaPredicted RBP29.31■■■□□ 2.28
PBX1-222ENST00000627490 KDM5BQ9UGL1 1544 aa29.31■■■□□ 2.28
PBX1-222ENST00000627490 ADCY10Q96PN6 1610 aa29.3■■■□□ 2.28
PBX1-222ENST00000627490 RIMBP3CA6NJZ7 1639 aa29.28■■■□□ 2.28
PBX1-222ENST00000627490 RIMBP3BA6NNM3 1639 aa29.28■■■□□ 2.28
PBX1-222ENST00000627490 RIMBP3Q9UFD9 1639 aa29.28■■■□□ 2.28
PBX1-222ENST00000627490 TROQ12816 1431 aaPredicted RBP29.27■■■□□ 2.28
PBX1-222ENST00000627490 ZCCHC11Q5TAX3 1644 aaKnown RBP29.25■■■□□ 2.27
PBX1-222ENST00000627490 NCOA2Q15596 1464 aa29.23■■■□□ 2.27
PBX1-222ENST00000627490 SETD5Q9C0A6 1442 aa29.22■■■□□ 2.27
PBX1-222ENST00000627490 ARID3CA6NKF2 412 aa29.22■■■□□ 2.27
PBX1-222ENST00000627490 RAB3GAP2Q9H2M9 1393 aa29.21■■■□□ 2.27
PBX1-222ENST00000627490 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.2■■■□□ 2.27
PBX1-222ENST00000627490 PHLDB1Q86UU1 1377 aa29.18■■■□□ 2.26
PBX1-222ENST00000627490 PLEKHD1A6NEE1 506 aa29.16■■■□□ 2.26
PBX1-222ENST00000627490 YTHDC1Q96MU7 727 aaKnown RBP29.16■■■□□ 2.26
PBX1-222ENST00000627490 MAPKBP1O60336 1514 aa29.14■■■□□ 2.26
PBX1-222ENST00000627490 KIF14Q15058 1648 aa29.14■■■□□ 2.26
PBX1-222ENST00000627490 MYOM3Q5VTT5 1437 aa29.11■■■□□ 2.25
PBX1-222ENST00000627490 TIMELESSQ9UNS1 1208 aa29.08■■■□□ 2.25
PBX1-222ENST00000627490 FGD6Q6ZV73 1430 aa29.06■■■□□ 2.24
PBX1-222ENST00000627490 ITGAEP38570 1179 aa29.06■■■□□ 2.24
PBX1-222ENST00000627490 ABCC10Q5T3U5 1492 aa29.05■■■□□ 2.24
PBX1-222ENST00000627490 ITSN2Q9NZM3 1697 aa29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms