RNA–Protein interactions for RNA: ENST00000627450.2

PDXDC1-218, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2 BASIC

Gene PDXDC1, Length 2,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-218ENST00000627450 P3H3Q8IVL6 736 aa21.32■■□□□ 1
PDXDC1-218ENST00000627450 CTTNBP2Q8WZ74 1663 aa21.32■■□□□ 1
PDXDC1-218ENST00000627450 ARHGAP35Q9NRY4 1499 aa21.31■■□□□ 1
PDXDC1-218ENST00000627450 SYNJ2O15056 1496 aa21.3■■□□□ 1
PDXDC1-218ENST00000627450 GRIN2AQ12879 1464 aa21.3■■□□□ 1
PDXDC1-218ENST00000627450 ARAP1Q96P48 1450 aa21.29■■□□□ 1
PDXDC1-218ENST00000627450 VPS8Q8N3P4 1428 aa21.22■□□□□ 0.99
PDXDC1-218ENST00000627450 TTBK1Q5TCY1 1321 aaPredicted RBP21.21■□□□□ 0.99
PDXDC1-218ENST00000627450 CEP170Q5SW79 1584 aa21.2■□□□□ 0.98
PDXDC1-218ENST00000627450 FHOD3Q2V2M9 1422 aa21.19■□□□□ 0.98
PDXDC1-218ENST00000627450 IQGAP2Q13576 1575 aa21.18■□□□□ 0.98
PDXDC1-218ENST00000627450 CHD1O14646 1710 aa21.16■□□□□ 0.98
PDXDC1-218ENST00000627450 KIAA0586Q9BVV6 1533 aa21.15■□□□□ 0.98
PDXDC1-218ENST00000627450 NUP160Q12769 1436 aa21.13■□□□□ 0.97
PDXDC1-218ENST00000627450 EFCAB5A4FU69 1503 aa21.1■□□□□ 0.97
PDXDC1-218ENST00000627450 SAMD9Q5K651 1589 aa21.09■□□□□ 0.97
PDXDC1-218ENST00000627450 ATP1B4Q9UN42 357 aaPredicted RBP21.07■□□□□ 0.96
PDXDC1-218ENST00000627450 JPH4Q96JJ6 628 aa21.06■□□□□ 0.96
PDXDC1-218ENST00000627450 PCGF6Q9BYE7 350 aa21.05■□□□□ 0.96
PDXDC1-218ENST00000627450 UGGT2Q9NYU1 1516 aa21.04■□□□□ 0.96
PDXDC1-218ENST00000627450 APLP2Q06481 763 aa21.04■□□□□ 0.96
PDXDC1-218ENST00000627450 DISP1Q96F81 1524 aa21.02■□□□□ 0.96
PDXDC1-218ENST00000627450 PCF11O94913 1555 aaKnown RBP20.99■□□□□ 0.95
PDXDC1-218ENST00000627450 KANK4Q5T7N3 995 aaPredicted RBP20.98■□□□□ 0.95
PDXDC1-218ENST00000627450 KIAA0556O60303 1618 aa20.97■□□□□ 0.95
PDXDC1-218ENST00000627450 FMN1Q68DA7 1419 aa20.96■□□□□ 0.95
PDXDC1-218ENST00000627450 TRIM26Q12899 539 aaPredicted RBP20.96■□□□□ 0.95
PDXDC1-218ENST00000627450 CASKIN1Q8WXD9 1431 aa20.91■□□□□ 0.94
PDXDC1-218ENST00000627450 PRG4Q92954 1404 aaPredicted RBP20.91■□□□□ 0.94
PDXDC1-218ENST00000627450 ARID3CA6NKF2 412 aa20.91■□□□□ 0.94
PDXDC1-218ENST00000627450 FYCO1Q9BQS8 1478 aa20.89■□□□□ 0.93
PDXDC1-218ENST00000627450 CARMIL2Q6F5E8 1435 aa20.89■□□□□ 0.93
PDXDC1-218ENST00000627450 CLASP1Q7Z460 1538 aa20.86■□□□□ 0.93
PDXDC1-218ENST00000627450 ERCC6L2Q5T890 1561 aa20.85■□□□□ 0.93
PDXDC1-218ENST00000627450 TIAM1Q13009 1591 aa20.85■□□□□ 0.93
PDXDC1-218ENST00000627450 LRRIQ1Q96JM4 1722 aa20.84■□□□□ 0.93
PDXDC1-218ENST00000627450 SHROOM2Q13796 1616 aa20.82■□□□□ 0.92
PDXDC1-218ENST00000627450 OSCARQ8IYS5 282 aa20.81■□□□□ 0.92
PDXDC1-218ENST00000627450 PLB1Q6P1J6 1458 aa20.81■□□□□ 0.92
PDXDC1-218ENST00000627450 LRRC9Q6ZRR7 1453 aa20.78■□□□□ 0.92
PDXDC1-218ENST00000627450 CFAP43Q8NDM7 1665 aa20.77■□□□□ 0.92
PDXDC1-218ENST00000627450 MAP3K1Q13233 1512 aa20.77■□□□□ 0.91
PDXDC1-218ENST00000627450 CDK13Q14004 1512 aaKnown RBP20.76■□□□□ 0.91
PDXDC1-218ENST00000627450 PTPRGP23470 1445 aa20.76■□□□□ 0.91
PDXDC1-218ENST00000627450 HECW1Q76N89 1606 aa20.75■□□□□ 0.91
PDXDC1-218ENST00000627450 RAPGEF6Q8TEU7 1601 aa20.74■□□□□ 0.91
PDXDC1-218ENST00000627450 EPRSP07814 1512 aaKnown RBP20.74■□□□□ 0.91
PDXDC1-218ENST00000627450 NUP153P49790 1475 aaKnown RBP20.74■□□□□ 0.91
PDXDC1-218ENST00000627450 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.72■□□□□ 0.91
PDXDC1-218ENST00000627450 HNRNPUL2Q1KMD3 747 aaKnown RBP20.72■□□□□ 0.91
PDXDC1-218ENST00000627450 MTUS2Q5JR59 1369 aa20.7■□□□□ 0.9
PDXDC1-218ENST00000627450 MAGI3Q5TCQ9 1506 aa20.69■□□□□ 0.9
PDXDC1-218ENST00000627450 CCDC18Q5T9S5 1454 aa20.67■□□□□ 0.9
PDXDC1-218ENST00000627450 ABCA8O94911 1581 aa20.66■□□□□ 0.9
PDXDC1-218ENST00000627450 PHLDB1Q86UU1 1377 aa20.65■□□□□ 0.9
PDXDC1-218ENST00000627450 UACAQ9BZF9 1416 aa20.61■□□□□ 0.89
PDXDC1-218ENST00000627450 ATP10BO94823 1461 aa20.59■□□□□ 0.89
PDXDC1-218ENST00000627450 EHBP1L1Q8N3D4 1523 aa20.57■□□□□ 0.88
PDXDC1-218ENST00000627450 NCOA2Q15596 1464 aa20.56■□□□□ 0.88
PDXDC1-218ENST00000627450 CDK11AQ9UQ88 783 aaPredicted RBP20.54■□□□□ 0.88
PDXDC1-218ENST00000627450 RRBP1Q9P2E9 1410 aaKnown RBP20.54■□□□□ 0.88
PDXDC1-218ENST00000627450 CCNB3Q8WWL7 1395 aa20.53■□□□□ 0.88
PDXDC1-218ENST00000627450 SUPT6HQ7KZ85 1726 aaKnown RBP20.53■□□□□ 0.88
PDXDC1-218ENST00000627450 ITGAEP38570 1179 aa20.52■□□□□ 0.88
PDXDC1-218ENST00000627450 ABCC2Q92887 1545 aa20.52■□□□□ 0.88
PDXDC1-218ENST00000627450 FAM50AQ14320 339 aaKnown RBP20.51■□□□□ 0.87
PDXDC1-218ENST00000627450 PLEKHD1A6NEE1 506 aa20.5■□□□□ 0.87
PDXDC1-218ENST00000627450 TROQ12816 1431 aaPredicted RBP20.48■□□□□ 0.87
PDXDC1-218ENST00000627450 ARHGEF11O15085 1522 aa20.47■□□□□ 0.87
PDXDC1-218ENST00000627450 KIF14Q15058 1648 aa20.46■□□□□ 0.87
PDXDC1-218ENST00000627450 MYOM3Q5VTT5 1437 aa20.45■□□□□ 0.86
PDXDC1-218ENST00000627450 FGD6Q6ZV73 1430 aa20.45■□□□□ 0.86
PDXDC1-218ENST00000627450 ADCY10Q96PN6 1610 aa20.45■□□□□ 0.86
PDXDC1-218ENST00000627450 UHRF1BP1LA0JNW5 1464 aa20.42■□□□□ 0.86
PDXDC1-218ENST00000627450 ZCCHC11Q5TAX3 1644 aaKnown RBP20.41■□□□□ 0.86
PDXDC1-218ENST00000627450 KCNH8Q96L42 1107 aa20.4■□□□□ 0.86
PDXDC1-218ENST00000627450 KDM5BQ9UGL1 1544 aa20.4■□□□□ 0.86
PDXDC1-218ENST00000627450 CYB5RLQ6IPT4 315 aa20.39■□□□□ 0.85
PDXDC1-218ENST00000627450 ZNF644Q9H582 1327 aaPredicted RBP20.36■□□□□ 0.85
PDXDC1-218ENST00000627450 RIMBP3CA6NJZ7 1639 aa20.35■□□□□ 0.85
PDXDC1-218ENST00000627450 RIMBP3BA6NNM3 1639 aa20.35■□□□□ 0.85
PDXDC1-218ENST00000627450 RIMBP3Q9UFD9 1639 aa20.35■□□□□ 0.85
PDXDC1-218ENST00000627450 PTPN23Q9H3S7 1636 aa20.34■□□□□ 0.85
PDXDC1-218ENST00000627450 GPATCH8Q9UKJ3 1502 aaKnown RBP20.33■□□□□ 0.84
PDXDC1-218ENST00000627450 ZNF777Q9ULD5 760 aaPredicted RBP20.32■□□□□ 0.84
PDXDC1-218ENST00000627450 CFDP1Q9UEE9 299 aaPredicted RBP20.32■□□□□ 0.84
PDXDC1-218ENST00000627450 ABCC10Q5T3U5 1492 aa20.32■□□□□ 0.84
PDXDC1-218ENST00000627450 MIA2Q96PC5 1412 aa20.29■□□□□ 0.84
PDXDC1-218ENST00000627450 PTPRKQ15262 1439 aa20.28■□□□□ 0.84
PDXDC1-218ENST00000627450 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.28■□□□□ 0.846e-6■□□□□ 9.1
PDXDC1-218ENST00000627450 NPM1P06748 294 aaKnown RBP eCLIP20.28■□□□□ 0.84
PDXDC1-218ENST00000627450 CDC42BPAQ5VT25 1732 aa20.27■□□□□ 0.84
PDXDC1-218ENST00000627450 TTC37Q6PGP7 1564 aa20.26■□□□□ 0.83
PDXDC1-218ENST00000627450 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.26■□□□□ 0.832e-7■■■■■ 47.7
PDXDC1-218ENST00000627450 TCOF1Q13428 1488 aaKnown RBP20.25■□□□□ 0.83
PDXDC1-218ENST00000627450 CHIC2Q9UKJ5 165 aa20.25■□□□□ 0.83
PDXDC1-218ENST00000627450 ASXL2Q76L83 1435 aa20.25■□□□□ 0.83
PDXDC1-218ENST00000627450 ITSN2Q9NZM3 1697 aa20.23■□□□□ 0.83
PDXDC1-218ENST00000627450 WDR7Q9Y4E6 1490 aa20.23■□□□□ 0.83
PDXDC1-218ENST00000627450 CCER1Q8TC90 406 aaPredicted RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms