RNA–Protein interactions for RNA: ENST00000625980.2

SPTAN1-211, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 1,713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-211ENST00000625980 CTTNBP2Q8WZ74 1663 aa20.42■□□□□ 0.86
SPTAN1-211ENST00000625980 FBLN2P98095 1184 aa20.42■□□□□ 0.86
SPTAN1-211ENST00000625980 ARHGAP35Q9NRY4 1499 aa20.39■□□□□ 0.86
SPTAN1-211ENST00000625980 ARAP1Q96P48 1450 aa20.37■□□□□ 0.85
SPTAN1-211ENST00000625980 P3H3Q8IVL6 736 aa20.32■□□□□ 0.84
SPTAN1-211ENST00000625980 VPS8Q8N3P4 1428 aa20.32■□□□□ 0.84
SPTAN1-211ENST00000625980 CEP170Q5SW79 1584 aa20.31■□□□□ 0.84
SPTAN1-211ENST00000625980 IQGAP2Q13576 1575 aa20.3■□□□□ 0.84
SPTAN1-211ENST00000625980 KIAA0586Q9BVV6 1533 aa20.29■□□□□ 0.84
SPTAN1-211ENST00000625980 NUP160Q12769 1436 aa20.29■□□□□ 0.84
SPTAN1-211ENST00000625980 CHD1O14646 1710 aa20.26■□□□□ 0.83
SPTAN1-211ENST00000625980 EFCAB5A4FU69 1503 aa20.26■□□□□ 0.83
SPTAN1-211ENST00000625980 FHOD3Q2V2M9 1422 aa20.25■□□□□ 0.83
SPTAN1-211ENST00000625980 PPARGC1BQ86YN6 1023 aaKnown RBP20.24■□□□□ 0.83
SPTAN1-211ENST00000625980 SAMD9Q5K651 1589 aa20.24■□□□□ 0.83
SPTAN1-211ENST00000625980 UGGT2Q9NYU1 1516 aa20.21■□□□□ 0.83
SPTAN1-211ENST00000625980 JPH4Q96JJ6 628 aa20.16■□□□□ 0.82
SPTAN1-211ENST00000625980 DISP1Q96F81 1524 aa20.15■□□□□ 0.82
SPTAN1-211ENST00000625980 TTBK1Q5TCY1 1321 aaPredicted RBP20.11■□□□□ 0.81
SPTAN1-211ENST00000625980 KIAA0556O60303 1618 aa20.11■□□□□ 0.81
SPTAN1-211ENST00000625980 APLP2Q06481 763 aa20.1■□□□□ 0.81
SPTAN1-211ENST00000625980 FMN1Q68DA7 1419 aa20.09■□□□□ 0.81
SPTAN1-211ENST00000625980 PCF11O94913 1555 aaKnown RBP20.09■□□□□ 0.81
SPTAN1-211ENST00000625980 ATP1B4Q9UN42 357 aaPredicted RBP20.06■□□□□ 0.8
SPTAN1-211ENST00000625980 CASKIN1Q8WXD9 1431 aa20.06■□□□□ 0.8
SPTAN1-211ENST00000625980 CLASP1Q7Z460 1538 aa20.04■□□□□ 0.8
SPTAN1-211ENST00000625980 CARMIL2Q6F5E8 1435 aa20.04■□□□□ 0.8
SPTAN1-211ENST00000625980 PRG4Q92954 1404 aaPredicted RBP20.03■□□□□ 0.8
SPTAN1-211ENST00000625980 FYCO1Q9BQS8 1478 aa20.03■□□□□ 0.8
SPTAN1-211ENST00000625980 KANK4Q5T7N3 995 aaPredicted RBP20.02■□□□□ 0.79
SPTAN1-211ENST00000625980 TRIM26Q12899 539 aaPredicted RBP20.01■□□□□ 0.79
SPTAN1-211ENST00000625980 SHROOM2Q13796 1616 aa20■□□□□ 0.79
SPTAN1-211ENST00000625980 PCGF6Q9BYE7 350 aa19.99■□□□□ 0.79
SPTAN1-211ENST00000625980 TIAM1Q13009 1591 aa19.97■□□□□ 0.79
SPTAN1-211ENST00000625980 MAP3K1Q13233 1512 aa19.95■□□□□ 0.78
SPTAN1-211ENST00000625980 ERCC6L2Q5T890 1561 aa19.95■□□□□ 0.78
SPTAN1-211ENST00000625980 OSCARQ8IYS5 282 aa19.94■□□□□ 0.78
SPTAN1-211ENST00000625980 LRRIQ1Q96JM4 1722 aa19.92■□□□□ 0.78
SPTAN1-211ENST00000625980 CFAP43Q8NDM7 1665 aa19.91■□□□□ 0.78
SPTAN1-211ENST00000625980 PLB1Q6P1J6 1458 aa19.9■□□□□ 0.78
SPTAN1-211ENST00000625980 HECW1Q76N89 1606 aa19.9■□□□□ 0.78
SPTAN1-211ENST00000625980 ARID3CA6NKF2 412 aa19.89■□□□□ 0.77
SPTAN1-211ENST00000625980 LRRC9Q6ZRR7 1453 aa19.89■□□□□ 0.77
SPTAN1-211ENST00000625980 PTPRGP23470 1445 aa19.89■□□□□ 0.77
SPTAN1-211ENST00000625980 RAPGEF6Q8TEU7 1601 aa19.89■□□□□ 0.77
SPTAN1-211ENST00000625980 EPRSP07814 1512 aaKnown RBP19.86■□□□□ 0.77
SPTAN1-211ENST00000625980 NUP153P49790 1475 aaKnown RBP19.86■□□□□ 0.77
SPTAN1-211ENST00000625980 CDK13Q14004 1512 aaKnown RBP19.84■□□□□ 0.77
SPTAN1-211ENST00000625980 CCDC18Q5T9S5 1454 aa19.84■□□□□ 0.77
SPTAN1-211ENST00000625980 ABCA8O94911 1581 aa19.84■□□□□ 0.77
SPTAN1-211ENST00000625980 MTUS2Q5JR59 1369 aa19.79■□□□□ 0.76
SPTAN1-211ENST00000625980 MAGI3Q5TCQ9 1506 aa19.79■□□□□ 0.76
SPTAN1-211ENST00000625980 UACAQ9BZF9 1416 aa19.77■□□□□ 0.75
SPTAN1-211ENST00000625980 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.76■□□□□ 0.75
SPTAN1-211ENST00000625980 HNRNPUL2Q1KMD3 747 aaKnown RBP19.76■□□□□ 0.75
SPTAN1-211ENST00000625980 PHLDB1Q86UU1 1377 aa19.73■□□□□ 0.75
SPTAN1-211ENST00000625980 EHBP1L1Q8N3D4 1523 aa19.73■□□□□ 0.75
SPTAN1-211ENST00000625980 ATP10BO94823 1461 aa19.73■□□□□ 0.75
SPTAN1-211ENST00000625980 ABCC2Q92887 1545 aa19.69■□□□□ 0.74
SPTAN1-211ENST00000625980 RRBP1Q9P2E9 1410 aaKnown RBP19.68■□□□□ 0.74
SPTAN1-211ENST00000625980 NCOA2Q15596 1464 aa19.68■□□□□ 0.74
SPTAN1-211ENST00000625980 CDK11AQ9UQ88 783 aaPredicted RBP19.68■□□□□ 0.74
SPTAN1-211ENST00000625980 SUPT6HQ7KZ85 1726 aaKnown RBP19.66■□□□□ 0.74
SPTAN1-211ENST00000625980 UHRF1BP1LA0JNW5 1464 aa19.65■□□□□ 0.74
SPTAN1-211ENST00000625980 ARHGEF11O15085 1522 aa19.64■□□□□ 0.73
SPTAN1-211ENST00000625980 CCNB3Q8WWL7 1395 aa19.64■□□□□ 0.73
SPTAN1-211ENST00000625980 TROQ12816 1431 aaPredicted RBP19.63■□□□□ 0.73
SPTAN1-211ENST00000625980 PLEKHD1A6NEE1 506 aa19.62■□□□□ 0.73
SPTAN1-211ENST00000625980 ADCY10Q96PN6 1610 aa19.59■□□□□ 0.73
SPTAN1-211ENST00000625980 MYOM3Q5VTT5 1437 aa19.58■□□□□ 0.73
SPTAN1-211ENST00000625980 KDM5BQ9UGL1 1544 aa19.58■□□□□ 0.72
SPTAN1-211ENST00000625980 FGD6Q6ZV73 1430 aa19.57■□□□□ 0.72
SPTAN1-211ENST00000625980 KIF14Q15058 1648 aa19.56■□□□□ 0.72
SPTAN1-211ENST00000625980 FAM50AQ14320 339 aaKnown RBP19.56■□□□□ 0.72
SPTAN1-211ENST00000625980 ZCCHC11Q5TAX3 1644 aaKnown RBP19.56■□□□□ 0.72
SPTAN1-211ENST00000625980 RIMBP3CA6NJZ7 1639 aa19.52■□□□□ 0.72
SPTAN1-211ENST00000625980 RIMBP3BA6NNM3 1639 aa19.52■□□□□ 0.72
SPTAN1-211ENST00000625980 RIMBP3Q9UFD9 1639 aa19.52■□□□□ 0.72
SPTAN1-211ENST00000625980 ITGAEP38570 1179 aa19.52■□□□□ 0.72
SPTAN1-211ENST00000625980 ABCC10Q5T3U5 1492 aa19.49■□□□□ 0.71
SPTAN1-211ENST00000625980 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.48■□□□□ 0.71
SPTAN1-211ENST00000625980 PTPN23Q9H3S7 1636 aa19.47■□□□□ 0.71
SPTAN1-211ENST00000625980 CYB5RLQ6IPT4 315 aa19.47■□□□□ 0.71
SPTAN1-211ENST00000625980 GPATCH8Q9UKJ3 1502 aaKnown RBP19.47■□□□□ 0.71
SPTAN1-211ENST00000625980 MIA2Q96PC5 1412 aa19.46■□□□□ 0.71
SPTAN1-211ENST00000625980 KCNH8Q96L42 1107 aa19.46■□□□□ 0.71
SPTAN1-211ENST00000625980 TCOF1Q13428 1488 aaKnown RBP19.45■□□□□ 0.7
SPTAN1-211ENST00000625980 CFDP1Q9UEE9 299 aaPredicted RBP19.42■□□□□ 0.7
SPTAN1-211ENST00000625980 ZNF644Q9H582 1327 aaPredicted RBP19.42■□□□□ 0.7
SPTAN1-211ENST00000625980 NPM1P06748 294 aaKnown RBP eCLIP19.42■□□□□ 0.7
SPTAN1-211ENST00000625980 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.41■□□□□ 0.7
SPTAN1-211ENST00000625980 WDR7Q9Y4E6 1490 aa19.4■□□□□ 0.7
SPTAN1-211ENST00000625980 ASXL2Q76L83 1435 aa19.4■□□□□ 0.7
SPTAN1-211ENST00000625980 CDC42BPAQ5VT25 1732 aa19.39■□□□□ 0.7
SPTAN1-211ENST00000625980 ITSN2Q9NZM3 1697 aa19.39■□□□□ 0.7
SPTAN1-211ENST00000625980 TTC37Q6PGP7 1564 aa19.39■□□□□ 0.69
SPTAN1-211ENST00000625980 PTPRKQ15262 1439 aa19.39■□□□□ 0.69
SPTAN1-211ENST00000625980 ZNF777Q9ULD5 760 aaPredicted RBP19.38■□□□□ 0.69
SPTAN1-211ENST00000625980 CAMSAP2Q08AD1 1489 aa19.35■□□□□ 0.69
SPTAN1-211ENST00000625980 PREX2Q70Z35 1606 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 173 ms