RNA–Protein interactions for RNA: ENST00000624513.1

PCDHB3-202, Transcript of protocadherin beta 3, humanhuman

TSL 3

Gene PCDHB3, Length 162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-202ENST00000624513 KIAA0586Q9BVV6 1533 aa16.46■□□□□ 0.23
PCDHB3-202ENST00000624513 TNIKQ9UKE5 1360 aa16.46■□□□□ 0.23
PCDHB3-202ENST00000624513 CEP170Q5SW79 1584 aa16.43■□□□□ 0.22
PCDHB3-202ENST00000624513 JPH4Q96JJ6 628 aa16.4■□□□□ 0.22
PCDHB3-202ENST00000624513 CTTNBP2Q8WZ74 1663 aa16.39■□□□□ 0.21
PCDHB3-202ENST00000624513 IQGAP2Q13576 1575 aa16.38■□□□□ 0.21
PCDHB3-202ENST00000624513 CLASP1Q7Z460 1538 aa16.37■□□□□ 0.21
PCDHB3-202ENST00000624513 UGGT2Q9NYU1 1516 aa16.32■□□□□ 0.2
PCDHB3-202ENST00000624513 RANGAP1P46060 587 aaPredicted RBP16.31■□□□□ 0.2
PCDHB3-202ENST00000624513 CARMIL2Q6F5E8 1435 aa16.3■□□□□ 0.2
PCDHB3-202ENST00000624513 SHROOM2Q13796 1616 aa16.29■□□□□ 0.2
PCDHB3-202ENST00000624513 PRG4Q92954 1404 aaPredicted RBP16.28■□□□□ 0.2
PCDHB3-202ENST00000624513 CLIP1P30622 1438 aa16.28■□□□□ 0.2
PCDHB3-202ENST00000624513 CEP162Q5TB80 1403 aa16.28■□□□□ 0.2
PCDHB3-202ENST00000624513 EFCAB5A4FU69 1503 aa16.26■□□□□ 0.19
PCDHB3-202ENST00000624513 DISP1Q96F81 1524 aa16.24■□□□□ 0.19
PCDHB3-202ENST00000624513 SAMD9Q5K651 1589 aa16.22■□□□□ 0.19
PCDHB3-202ENST00000624513 P3H3Q8IVL6 736 aa16.22■□□□□ 0.19
PCDHB3-202ENST00000624513 ARHGAP35Q9NRY4 1499 aa16.22■□□□□ 0.19
PCDHB3-202ENST00000624513 KIAA0556O60303 1618 aa16.19■□□□□ 0.18
PCDHB3-202ENST00000624513 DNAJC5Q9H3Z4 198 aa16.17■□□□□ 0.18
PCDHB3-202ENST00000624513 PTPRGP23470 1445 aa16.17■□□□□ 0.18
PCDHB3-202ENST00000624513 FHOD3Q2V2M9 1422 aa16.16■□□□□ 0.18
PCDHB3-202ENST00000624513 ARHGEF11O15085 1522 aa16.15■□□□□ 0.18
PCDHB3-202ENST00000624513 ERCC6L2Q5T890 1561 aa16.15■□□□□ 0.18
PCDHB3-202ENST00000624513 FMN1Q68DA7 1419 aa16.15■□□□□ 0.18
PCDHB3-202ENST00000624513 ARAP1Q96P48 1450 aa16.14■□□□□ 0.17
PCDHB3-202ENST00000624513 TTBK1Q5TCY1 1321 aaPredicted RBP16.11■□□□□ 0.17
PCDHB3-202ENST00000624513 RIMBP3CA6NJZ7 1639 aa16.09■□□□□ 0.17
PCDHB3-202ENST00000624513 RIMBP3BA6NNM3 1639 aa16.09■□□□□ 0.17
PCDHB3-202ENST00000624513 RIMBP3Q9UFD9 1639 aa16.09■□□□□ 0.17
PCDHB3-202ENST00000624513 VPS8Q8N3P4 1428 aa16.07■□□□□ 0.16
PCDHB3-202ENST00000624513 UACAQ9BZF9 1416 aa16.06■□□□□ 0.16
PCDHB3-202ENST00000624513 CYB5RLQ6IPT4 315 aa16.06■□□□□ 0.16
PCDHB3-202ENST00000624513 CASKIN1Q8WXD9 1431 aa16.03■□□□□ 0.16
PCDHB3-202ENST00000624513 ATP1B4Q9UN42 357 aaPredicted RBP16.02■□□□□ 0.16
PCDHB3-202ENST00000624513 UHRF1BP1LA0JNW5 1464 aa16.02■□□□□ 0.15
PCDHB3-202ENST00000624513 PLB1Q6P1J6 1458 aa16.02■□□□□ 0.15
PCDHB3-202ENST00000624513 ABCA8O94911 1581 aa16.01■□□□□ 0.15
PCDHB3-202ENST00000624513 FYCO1Q9BQS8 1478 aa16■□□□□ 0.15
PCDHB3-202ENST00000624513 RAPGEF6Q8TEU7 1601 aa16■□□□□ 0.15
PCDHB3-202ENST00000624513 NPM1P06748 294 aaKnown RBP eCLIP15.99■□□□□ 0.15
PCDHB3-202ENST00000624513 APLP2Q06481 763 aa15.99■□□□□ 0.15
PCDHB3-202ENST00000624513 ABCC2Q92887 1545 aa15.99■□□□□ 0.15
PCDHB3-202ENST00000624513 HECW1Q76N89 1606 aa15.96■□□□□ 0.15
PCDHB3-202ENST00000624513 NUP153P49790 1475 aaKnown RBP15.95■□□□□ 0.14
PCDHB3-202ENST00000624513 PCF11O94913 1555 aaKnown RBP15.95■□□□□ 0.14
PCDHB3-202ENST00000624513 CDK11AQ9UQ88 783 aaPredicted RBP15.94■□□□□ 0.14
PCDHB3-202ENST00000624513 CCDC18Q5T9S5 1454 aa15.93■□□□□ 0.14
PCDHB3-202ENST00000624513 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.93■□□□□ 0.14
PCDHB3-202ENST00000624513 HNRNPUL2Q1KMD3 747 aaKnown RBP15.93■□□□□ 0.14
PCDHB3-202ENST00000624513 EPRSP07814 1512 aaKnown RBP15.93■□□□□ 0.14
PCDHB3-202ENST00000624513 KDM5BQ9UGL1 1544 aa15.93■□□□□ 0.14
PCDHB3-202ENST00000624513 ADCY10Q96PN6 1610 aa15.92■□□□□ 0.14
PCDHB3-202ENST00000624513 ATP10BO94823 1461 aa15.91■□□□□ 0.14
PCDHB3-202ENST00000624513 MAP3K1Q13233 1512 aa15.91■□□□□ 0.14
PCDHB3-202ENST00000624513 ARID3CA6NKF2 412 aa15.9■□□□□ 0.14
PCDHB3-202ENST00000624513 PLEKHD1A6NEE1 506 aa15.89■□□□□ 0.13
PCDHB3-202ENST00000624513 CDK13Q14004 1512 aaKnown RBP15.84■□□□□ 0.13
PCDHB3-202ENST00000624513 ZCCHC11Q5TAX3 1644 aaKnown RBP15.84■□□□□ 0.13
PCDHB3-202ENST00000624513 TIAM1Q13009 1591 aa15.83■□□□□ 0.13
PCDHB3-202ENST00000624513 LRRIQ1Q96JM4 1722 aa15.82■□□□□ 0.12
PCDHB3-202ENST00000624513 MTUS2Q5JR59 1369 aa15.82■□□□□ 0.12
PCDHB3-202ENST00000624513 CFAP43Q8NDM7 1665 aa15.8■□□□□ 0.12
PCDHB3-202ENST00000624513 LRRC9Q6ZRR7 1453 aa15.8■□□□□ 0.12
PCDHB3-202ENST00000624513 ASXL2Q76L83 1435 aa15.8■□□□□ 0.12
PCDHB3-202ENST00000624513 KANK4Q5T7N3 995 aaPredicted RBP15.8■□□□□ 0.12
PCDHB3-202ENST00000624513 MAPKBP1O60336 1514 aa15.79■□□□□ 0.12
PCDHB3-202ENST00000624513 TROQ12816 1431 aaPredicted RBP15.79■□□□□ 0.12
PCDHB3-202ENST00000624513 WDR7Q9Y4E6 1490 aa15.78■□□□□ 0.12
PCDHB3-202ENST00000624513 KCNH8Q96L42 1107 aa15.77■□□□□ 0.12
PCDHB3-202ENST00000624513 EHBP1L1Q8N3D4 1523 aa15.75■□□□□ 0.11
PCDHB3-202ENST00000624513 MAGI3Q5TCQ9 1506 aa15.73■□□□□ 0.11
PCDHB3-202ENST00000624513 PPARGC1BQ86YN6 1023 aaKnown RBP15.72■□□□□ 0.11
PCDHB3-202ENST00000624513 KIF14Q15058 1648 aa15.69■□□□□ 0.1
PCDHB3-202ENST00000624513 SUPT6HQ7KZ85 1726 aaKnown RBP15.69■□□□□ 0.1
PCDHB3-202ENST00000624513 ABCC10Q5T3U5 1492 aa15.69■□□□□ 0.1
PCDHB3-202ENST00000624513 FAM69CQ0P6D2 419 aa15.68■□□□□ 0.1
PCDHB3-202ENST00000624513 NCOA2Q15596 1464 aa15.67■□□□□ 0.1
PCDHB3-202ENST00000624513 CCNB3Q8WWL7 1395 aa15.66■□□□□ 0.1
PCDHB3-202ENST00000624513 GLI2P10070 1586 aa15.66■□□□□ 0.1
PCDHB3-202ENST00000624513 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.64■□□□□ 0.09
PCDHB3-202ENST00000624513 ABCA9Q8IUA7 1624 aa15.63■□□□□ 0.09
PCDHB3-202ENST00000624513 CD109Q6YHK3 1445 aa15.62■□□□□ 0.09
PCDHB3-202ENST00000624513 DIP2BQ9P265 1576 aa15.62■□□□□ 0.09
PCDHB3-202ENST00000624513 PLCH2O75038 1416 aa15.61■□□□□ 0.09
PCDHB3-202ENST00000624513 TRHP20396 242 aaPredicted RBP15.61■□□□□ 0.09
PCDHB3-202ENST00000624513 CFDP1Q9UEE9 299 aaPredicted RBP15.61■□□□□ 0.09
PCDHB3-202ENST00000624513 GPATCH8Q9UKJ3 1502 aaKnown RBP15.61■□□□□ 0.09
PCDHB3-202ENST00000624513 PHLDB1Q86UU1 1377 aa15.61■□□□□ 0.09
PCDHB3-202ENST00000624513 MYOM3Q5VTT5 1437 aa15.6■□□□□ 0.09
PCDHB3-202ENST00000624513 EFCAB2Q5VUJ9 269 aa15.6■□□□□ 0.09
PCDHB3-202ENST00000624513 MIA2Q96PC5 1412 aa15.6■□□□□ 0.09
PCDHB3-202ENST00000624513 ARAP3Q8WWN8 1544 aa15.58■□□□□ 0.09
PCDHB3-202ENST00000624513 TTC37Q6PGP7 1564 aa15.58■□□□□ 0.09
PCDHB3-202ENST00000624513 MAP3K4Q9Y6R4 1608 aa15.56■□□□□ 0.08
PCDHB3-202ENST00000624513 ITSN2Q9NZM3 1697 aa15.56■□□□□ 0.08
PCDHB3-202ENST00000624513 MYO5CQ9NQX4 1742 aa15.56■□□□□ 0.08
PCDHB3-202ENST00000624513 CDC42BPAQ5VT25 1732 aa15.55■□□□□ 0.08
PCDHB3-202ENST00000624513 FGD6Q6ZV73 1430 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms