RNA–Protein interactions for RNA: ENST00000624304.3

SMIM11B-205, Transcript of small integral membrane protein 11B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11B, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11B-205ENST00000624304 CHD1O14646 1710 aa33■■■□□ 2.87
SMIM11B-205ENST00000624304 CTTNBP2Q8WZ74 1663 aa32.99■■■□□ 2.87
SMIM11B-205ENST00000624304 CEP162Q5TB80 1403 aa32.96■■■□□ 2.87
SMIM11B-205ENST00000624304 CEP170Q5SW79 1584 aa32.89■■■□□ 2.86
SMIM11B-205ENST00000624304 PCGF6Q9BYE7 350 aa32.83■■■□□ 2.85
SMIM11B-205ENST00000624304 CLIP1P30622 1438 aa32.82■■■□□ 2.85
SMIM11B-205ENST00000624304 NUP160Q12769 1436 aa32.79■■■□□ 2.84
SMIM11B-205ENST00000624304 IQGAP2Q13576 1575 aa32.75■■■□□ 2.83
SMIM11B-205ENST00000624304 KIAA0586Q9BVV6 1533 aa32.74■■■□□ 2.83
SMIM11B-205ENST00000624304 ARHGAP35Q9NRY4 1499 aa32.71■■■□□ 2.83
SMIM11B-205ENST00000624304 P3H3Q8IVL6 736 aa32.69■■■□□ 2.82
SMIM11B-205ENST00000624304 ARAP1Q96P48 1450 aa32.62■■■□□ 2.81
SMIM11B-205ENST00000624304 SAMD9Q5K651 1589 aa32.58■■■□□ 2.81
SMIM11B-205ENST00000624304 JPH4Q96JJ6 628 aa32.57■■■□□ 2.8
SMIM11B-205ENST00000624304 UGGT2Q9NYU1 1516 aa32.57■■■□□ 2.8
SMIM11B-205ENST00000624304 FHOD3Q2V2M9 1422 aa32.55■■■□□ 2.8
SMIM11B-205ENST00000624304 EFCAB5A4FU69 1503 aa32.53■■■□□ 2.8
SMIM11B-205ENST00000624304 CLASP1Q7Z460 1538 aa32.53■■■□□ 2.8
SMIM11B-205ENST00000624304 DISP1Q96F81 1524 aa32.5■■■□□ 2.79
SMIM11B-205ENST00000624304 OSCARQ8IYS5 282 aa32.47■■■□□ 2.79
SMIM11B-205ENST00000624304 KIAA0556O60303 1618 aa32.45■■■□□ 2.79
SMIM11B-205ENST00000624304 SHROOM2Q13796 1616 aa32.44■■■□□ 2.78
SMIM11B-205ENST00000624304 VPS8Q8N3P4 1428 aa32.43■■■□□ 2.78
SMIM11B-205ENST00000624304 TTBK1Q5TCY1 1321 aaPredicted RBP32.4■■■□□ 2.78
SMIM11B-205ENST00000624304 PRG4Q92954 1404 aaPredicted RBP32.4■■■□□ 2.78
SMIM11B-205ENST00000624304 TRIM26Q12899 539 aaPredicted RBP32.39■■■□□ 2.78
SMIM11B-205ENST00000624304 ERCC6L2Q5T890 1561 aa32.38■■■□□ 2.77
SMIM11B-205ENST00000624304 CARMIL2Q6F5E8 1435 aa32.31■■■□□ 2.76
SMIM11B-205ENST00000624304 PPARGC1BQ86YN6 1023 aaKnown RBP32.28■■■□□ 2.76
SMIM11B-205ENST00000624304 PCF11O94913 1555 aaKnown RBP32.26■■■□□ 2.76
SMIM11B-205ENST00000624304 FMN1Q68DA7 1419 aa32.24■■■□□ 2.75
SMIM11B-205ENST00000624304 ATP1B4Q9UN42 357 aaPredicted RBP32.23■■■□□ 2.75
SMIM11B-205ENST00000624304 LRRIQ1Q96JM4 1722 aa32.17■■■□□ 2.74
SMIM11B-205ENST00000624304 CASKIN1Q8WXD9 1431 aa32.15■■■□□ 2.74
SMIM11B-205ENST00000624304 PLB1Q6P1J6 1458 aa32.12■■■□□ 2.73
SMIM11B-205ENST00000624304 PTPRGP23470 1445 aa32.11■■■□□ 2.73
SMIM11B-205ENST00000624304 FYCO1Q9BQS8 1478 aa32.11■■■□□ 2.73
SMIM11B-205ENST00000624304 ARID3CA6NKF2 412 aa32.08■■■□□ 2.73
SMIM11B-205ENST00000624304 RAPGEF6Q8TEU7 1601 aa32.07■■■□□ 2.72
SMIM11B-205ENST00000624304 ZEB1P37275 1124 aaPredicted RBP32.06■■■□□ 2.72
SMIM11B-205ENST00000624304 APLP2Q06481 763 aa32.06■■■□□ 2.72
SMIM11B-205ENST00000624304 KANK4Q5T7N3 995 aaPredicted RBP32.03■■■□□ 2.72
SMIM11B-205ENST00000624304 ABCA8O94911 1581 aa32.01■■■□□ 2.71
SMIM11B-205ENST00000624304 HECW1Q76N89 1606 aa32.01■■■□□ 2.71
SMIM11B-205ENST00000624304 TIAM1Q13009 1591 aa31.99■■■□□ 2.71
SMIM11B-205ENST00000624304 NUP153P49790 1475 aaKnown RBP31.98■■■□□ 2.71
SMIM11B-205ENST00000624304 ARHGEF11O15085 1522 aa31.96■■■□□ 2.71
SMIM11B-205ENST00000624304 CFAP43Q8NDM7 1665 aa31.96■■■□□ 2.71
SMIM11B-205ENST00000624304 CDK13Q14004 1512 aaKnown RBP31.96■■■□□ 2.71
SMIM11B-205ENST00000624304 EPRSP07814 1512 aaKnown RBP31.94■■■□□ 2.7
SMIM11B-205ENST00000624304 UACAQ9BZF9 1416 aa31.91■■■□□ 2.7
SMIM11B-205ENST00000624304 MAP3K1Q13233 1512 aa31.89■■■□□ 2.7
SMIM11B-205ENST00000624304 RIMBP3CA6NJZ7 1639 aa31.89■■■□□ 2.7
SMIM11B-205ENST00000624304 RIMBP3BA6NNM3 1639 aa31.89■■■□□ 2.7
SMIM11B-205ENST00000624304 RIMBP3Q9UFD9 1639 aa31.89■■■□□ 2.7
SMIM11B-205ENST00000624304 CCDC18Q5T9S5 1454 aa31.84■■■□□ 2.69
SMIM11B-205ENST00000624304 LRRC9Q6ZRR7 1453 aa31.84■■■□□ 2.69
SMIM11B-205ENST00000624304 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.84■■■□□ 2.69
SMIM11B-205ENST00000624304 HNRNPUL2Q1KMD3 747 aaKnown RBP31.84■■■□□ 2.69
SMIM11B-205ENST00000624304 MAGI3Q5TCQ9 1506 aa31.83■■■□□ 2.69
SMIM11B-205ENST00000624304 ABCC2Q92887 1545 aa31.83■■■□□ 2.69
SMIM11B-205ENST00000624304 ATP10BO94823 1461 aa31.81■■■□□ 2.68
SMIM11B-205ENST00000624304 ADCY10Q96PN6 1610 aa31.79■■■□□ 2.68
SMIM11B-205ENST00000624304 UHRF1BP1LA0JNW5 1464 aa31.74■■■□□ 2.67
SMIM11B-205ENST00000624304 MTUS2Q5JR59 1369 aa31.73■■■□□ 2.67
SMIM11B-205ENST00000624304 CYB5RLQ6IPT4 315 aa31.73■■■□□ 2.67
SMIM11B-205ENST00000624304 ZCCHC11Q5TAX3 1644 aaKnown RBP31.69■■■□□ 2.66
SMIM11B-205ENST00000624304 KDM5BQ9UGL1 1544 aa31.65■■■□□ 2.66
SMIM11B-205ENST00000624304 EHBP1L1Q8N3D4 1523 aa31.64■■■□□ 2.66
SMIM11B-205ENST00000624304 CDK11AQ9UQ88 783 aaPredicted RBP31.61■■■□□ 2.65
SMIM11B-205ENST00000624304 SUPT6HQ7KZ85 1726 aaKnown RBP31.59■■■□□ 2.65
SMIM11B-205ENST00000624304 PLEKHD1A6NEE1 506 aa31.59■■■□□ 2.65
SMIM11B-205ENST00000624304 PHLDB1Q86UU1 1377 aa31.58■■■□□ 2.65
SMIM11B-205ENST00000624304 TROQ12816 1431 aaPredicted RBP31.56■■■□□ 2.64
SMIM11B-205ENST00000624304 NCOA2Q15596 1464 aa31.56■■■□□ 2.64
SMIM11B-205ENST00000624304 KIF14Q15058 1648 aa31.55■■■□□ 2.64
SMIM11B-205ENST00000624304 KCNH8Q96L42 1107 aa31.46■■■□□ 2.63
SMIM11B-205ENST00000624304 NPM1P06748 294 aaKnown RBP eCLIP31.46■■■□□ 2.63
SMIM11B-205ENST00000624304 ASXL2Q76L83 1435 aa31.41■■■□□ 2.62
SMIM11B-205ENST00000624304 DNAJC5Q9H3Z4 198 aa31.38■■■□□ 2.61
SMIM11B-205ENST00000624304 ABCC10Q5T3U5 1492 aa31.37■■■□□ 2.61
SMIM11B-205ENST00000624304 RRBP1Q9P2E9 1410 aaKnown RBP31.37■■■□□ 2.61
SMIM11B-205ENST00000624304 WDR7Q9Y4E6 1490 aa31.36■■■□□ 2.61
SMIM11B-205ENST00000624304 MYOM3Q5VTT5 1437 aa31.36■■■□□ 2.61
SMIM11B-205ENST00000624304 CDC42BPAQ5VT25 1732 aa31.34■■■□□ 2.61
SMIM11B-205ENST00000624304 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.34■■■□□ 2.61
SMIM11B-205ENST00000624304 TTC37Q6PGP7 1564 aa31.33■■■□□ 2.61
SMIM11B-205ENST00000624304 CCNB3Q8WWL7 1395 aa31.33■■■□□ 2.61
SMIM11B-205ENST00000624304 FGD6Q6ZV73 1430 aa31.32■■■□□ 2.6
SMIM11B-205ENST00000624304 GPATCH8Q9UKJ3 1502 aaKnown RBP31.3■■■□□ 2.6
SMIM11B-205ENST00000624304 FAM50AQ14320 339 aaKnown RBP31.28■■■□□ 2.6
SMIM11B-205ENST00000624304 CDC42BPBQ9Y5S2 1711 aa31.25■■■□□ 2.59
SMIM11B-205ENST00000624304 PTPN23Q9H3S7 1636 aa31.25■■■□□ 2.59
SMIM11B-205ENST00000624304 ITSN2Q9NZM3 1697 aa31.24■■■□□ 2.59
SMIM11B-205ENST00000624304 MAPKBP1O60336 1514 aa31.23■■■□□ 2.59
SMIM11B-205ENST00000624304 ZNF644Q9H582 1327 aaPredicted RBP31.23■■■□□ 2.59
SMIM11B-205ENST00000624304 ITGAEP38570 1179 aa31.21■■■□□ 2.59
SMIM11B-205ENST00000624304 CFDP1Q9UEE9 299 aaPredicted RBP31.21■■■□□ 2.59
SMIM11B-205ENST00000624304 MYO5CQ9NQX4 1742 aa31.2■■■□□ 2.59
SMIM11B-205ENST00000624304 MIA2Q96PC5 1412 aa31.18■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms