RNA–Protein interactions for RNA: ENST00000624166.3

ATRX-214, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 4,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-214ENST00000624166 SIN3AQ96ST3 1273 aa15.95■□□□□ 0.14
ATRX-214ENST00000624166 DHX57Q6P158 1386 aaKnown RBP15.94■□□□□ 0.14
ATRX-214ENST00000624166 TOP2AP11388 1531 aaKnown RBP15.93■□□□□ 0.14
ATRX-214ENST00000624166 MTUS2Q5JR59 1369 aa15.91■□□□□ 0.14
ATRX-214ENST00000624166 NOP58Q9Y2X3 529 aaKnown RBP15.91■□□□□ 0.14
ATRX-214ENST00000624166 SETD5Q9C0A6 1442 aa15.9■□□□□ 0.14
ATRX-214ENST00000624166 TMC1Q8TDI8 760 aa15.9■□□□□ 0.14
ATRX-214ENST00000624166 BAZ1BQ9UIG0 1483 aaKnown RBP15.88■□□□□ 0.13
ATRX-214ENST00000624166 KANK4Q5T7N3 995 aaPredicted RBP15.88■□□□□ 0.13
ATRX-214ENST00000624166 EIF5BO60841 1220 aaKnown RBP15.85■□□□□ 0.13
ATRX-214ENST00000624166 RAB3GAP2Q9H2M9 1393 aa15.85■□□□□ 0.13
ATRX-214ENST00000624166 DEKP35659 375 aaKnown RBP15.84■□□□□ 0.13
ATRX-214ENST00000624166 CHIC2Q9UKJ5 165 aa15.82■□□□□ 0.12
ATRX-214ENST00000624166 FHAD1B1AJZ9 1412 aa15.82■□□□□ 0.12
ATRX-214ENST00000624166 DDRGK1Q96HY6 314 aa15.81■□□□□ 0.12
ATRX-214ENST00000624166 PPM1GO15355 546 aaPredicted RBP15.8■□□□□ 0.12
ATRX-214ENST00000624166 B4GALNT3Q6L9W6 998 aa15.8■□□□□ 0.12
ATRX-214ENST00000624166 RUSC2Q8N2Y8 1516 aa15.79■□□□□ 0.12
ATRX-214ENST00000624166 PPP1R15AO75807 674 aaPredicted RBP15.79■□□□□ 0.12
ATRX-214ENST00000624166 FANCIQ9NVI1 1328 aa15.76■□□□□ 0.11
ATRX-214ENST00000624166 KCNH8Q96L42 1107 aa15.76■□□□□ 0.11
ATRX-214ENST00000624166 RAPGEF2Q9Y4G8 1499 aa15.75■□□□□ 0.11
ATRX-214ENST00000624166 CANXP27824 592 aaKnown RBP15.74■□□□□ 0.11
ATRX-214ENST00000624166 RRP7BPQ9NSQ0 103 aa15.74■□□□□ 0.11
ATRX-214ENST00000624166 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.74■□□□□ 0.11
ATRX-214ENST00000624166 GLIPR1L2Q4G1C9 344 aa15.73■□□□□ 0.11
ATRX-214ENST00000624166 SALL2Q9Y467 1007 aaPredicted RBP15.71■□□□□ 0.11
ATRX-214ENST00000624166 ARID3CA6NKF2 412 aa15.69■□□□□ 0.1
ATRX-214ENST00000624166 UPF2Q9HAU5 1272 aaKnown RBP15.69■□□□□ 0.1
ATRX-214ENST00000624166 SLC4A1APQ9BWU0 796 aaKnown RBP15.69■□□□□ 0.1
ATRX-214ENST00000624166 NEFMP07197 916 aa15.68■□□□□ 0.1
ATRX-214ENST00000624166 ARHGAP35Q9NRY4 1499 aa15.67■□□□□ 0.1
ATRX-214ENST00000624166 HSPA5P11021 654 aaKnown RBP15.66■□□□□ 0.1
ATRX-214ENST00000624166 ZNF777Q9ULD5 760 aaPredicted RBP15.66■□□□□ 0.1
ATRX-214ENST00000624166 SMARCA4P51532 1647 aa15.65■□□□□ 0.1
ATRX-214ENST00000624166 CARMIL1Q5VZK9 1371 aa15.65■□□□□ 0.1
ATRX-214ENST00000624166 SMARCA2P51531 1590 aa15.64■□□□□ 0.09
ATRX-214ENST00000624166 LAS1LQ9Y4W2 734 aaKnown RBP15.61■□□□□ 0.09
ATRX-214ENST00000624166 IPO9Q96P70 1041 aaKnown RBP15.61■□□□□ 0.09
ATRX-214ENST00000624166 KIF21BO75037 1637 aa15.61■□□□□ 0.09
ATRX-214ENST00000624166 CUX2O14529 1486 aa15.59■□□□□ 0.09
ATRX-214ENST00000624166 WDR43Q15061 677 aaKnown RBP eCLIP15.58■□□□□ 0.09
ATRX-214ENST00000624166 BECN1Q14457 450 aa15.57■□□□□ 0.08
ATRX-214ENST00000624166 RTN4Q9NQC3 1192 aaKnown RBP15.56■□□□□ 0.08
ATRX-214ENST00000624166 TCERG1O14776 1098 aaKnown RBP15.56■□□□□ 0.08
ATRX-214ENST00000624166 ANP32BQ92688 251 aaKnown RBP15.55■□□□□ 0.08
ATRX-214ENST00000624166 KDM2AQ9Y2K7 1162 aa15.54■□□□□ 0.08
ATRX-214ENST00000624166 RRBP1Q9P2E9 1410 aaKnown RBP15.54■□□□□ 0.08
ATRX-214ENST00000624166 NUDCQ9Y266 331 aa15.54■□□□□ 0.08
ATRX-214ENST00000624166 FMN1Q68DA7 1419 aa15.53■□□□□ 0.08
ATRX-214ENST00000624166 TSPY4P0CV99 314 aa15.51■□□□□ 0.07
ATRX-214ENST00000624166 TSPY10P0CW01 314 aa15.51■□□□□ 0.07
ATRX-214ENST00000624166 ZBED9Q6R2W3 1325 aa15.51■□□□□ 0.07
ATRX-214ENST00000624166 CARD11Q9BXL7 1154 aa15.51■□□□□ 0.07
ATRX-214ENST00000624166 USP35Q9P2H5 1018 aa15.5■□□□□ 0.07
ATRX-214ENST00000624166 SENP3-EIF4A1A0A087X0R7 540 aa15.47■□□□□ 0.07
ATRX-214ENST00000624166 PRKRIP1Q9H875 184 aaPredicted RBP15.46■□□□□ 0.07
ATRX-214ENST00000624166 HSP90AA1P07900 732 aaKnown RBP15.46■□□□□ 0.07
ATRX-214ENST00000624166 MPHOSPH9Q99550 1183 aa15.45■□□□□ 0.06
ATRX-214ENST00000624166 RCAN3Q9UKA8 241 aa15.43■□□□□ 0.06
ATRX-214ENST00000624166 ERICH3Q5RHP9 1530 aa15.43■□□□□ 0.06
ATRX-214ENST00000624166 ATAD2BQ9ULI0 1458 aa15.43■□□□□ 0.06
ATRX-214ENST00000624166 FBLN2P98095 1184 aa15.43■□□□□ 0.06
ATRX-214ENST00000624166 L3MBTL2Q969R5 705 aa15.43■□□□□ 0.06
ATRX-214ENST00000624166 RALBP1Q15311 655 aa15.4■□□□□ 0.06
ATRX-214ENST00000624166 ARXQ96QS3 562 aa15.4■□□□□ 0.06
ATRX-214ENST00000624166 CFDP1Q9UEE9 299 aaPredicted RBP15.4■□□□□ 0.06
ATRX-214ENST00000624166 CCDC18Q5T9S5 1454 aa15.4■□□□□ 0.06
ATRX-214ENST00000624166 PDE3BQ13370 1112 aa15.39■□□□□ 0.05
ATRX-214ENST00000624166 ROCK2O75116 1388 aaKnown RBP15.37■□□□□ 0.05
ATRX-214ENST00000624166 RGS3P49796 1198 aa15.37■□□□□ 0.05
ATRX-214ENST00000624166 CDCA8Q53HL2 280 aa15.37■□□□□ 0.05
ATRX-214ENST00000624166 ARAP1Q96P48 1450 aa15.37■□□□□ 0.05
ATRX-214ENST00000624166 L1TD1Q5T7N2 865 aaKnown RBP15.37■□□□□ 0.05
ATRX-214ENST00000624166 TRIM44Q96DX7 344 aaPredicted RBP15.37■□□□□ 0.05
ATRX-214ENST00000624166 KNSTRNQ9Y448 316 aa15.36■□□□□ 0.05
ATRX-214ENST00000624166 LRRC9Q6ZRR7 1453 aa15.35■□□□□ 0.05
ATRX-214ENST00000624166 FHOD3Q2V2M9 1422 aa15.35■□□□□ 0.05
ATRX-214ENST00000624166 UACAQ9BZF9 1416 aa15.35■□□□□ 0.05
ATRX-214ENST00000624166 SYNJ1O43426 1573 aa15.35■□□□□ 0.05
ATRX-214ENST00000624166 PHLDB1Q86UU1 1377 aa15.34■□□□□ 0.05
ATRX-214ENST00000624166 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.34■□□□□ 0.058e-7■■■□□ 15.2
ATRX-214ENST00000624166 KTN1Q86UP2 1357 aaKnown RBP15.33■□□□□ 0.04
ATRX-214ENST00000624166 MS4A1P11836 297 aa15.33■□□□□ 0.04
ATRX-214ENST00000624166 FOXD1Q16676 465 aa15.33■□□□□ 0.04
ATRX-214ENST00000624166 PDE4AP27815 886 aa15.33■□□□□ 0.04
ATRX-214ENST00000624166 CNTLNQ9NXG0 1405 aa15.33■□□□□ 0.04
ATRX-214ENST00000624166 PRXQ9BXM0 1461 aa15.32■□□□□ 0.04
ATRX-214ENST00000624166 RGL3Q3MIN7 710 aa15.3■□□□□ 0.04
ATRX-214ENST00000624166 NAP1L5Q96NT1 182 aaPredicted RBP15.3■□□□□ 0.04
ATRX-214ENST00000624166 PLEKHD1A6NEE1 506 aa15.29■□□□□ 0.04
ATRX-214ENST00000624166 CCDC7Q96M83 1385 aa15.29■□□□□ 0.04
ATRX-214ENST00000624166 MSH5O43196 834 aa15.29■□□□□ 0.04
ATRX-214ENST00000624166 NLRP13Q86W25 1043 aa15.29■□□□□ 0.04
ATRX-214ENST00000624166 FGD6Q6ZV73 1430 aa15.28■□□□□ 0.04
ATRX-214ENST00000624166 WASHC2AQ641Q2 1341 aa15.28■□□□□ 0.04
ATRX-214ENST00000624166 CC2D1BQ5T0F9 858 aaKnown RBP15.28■□□□□ 0.04
ATRX-214ENST00000624166 WDR97A6NE52 1622 aa15.28■□□□□ 0.04
ATRX-214ENST00000624166 GOLGA6L22H0YM25 854 aa15.28■□□□□ 0.04
ATRX-214ENST00000624166 RRP1P56182 461 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms