RNA–Protein interactions for RNA: ENST00000624071.1

LINC01006-208, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

Gene LINC01006, Length 651 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-208ENST00000624071 CHIC1Q5VXU3 224 aa32.05■■■□□ 2.72
LINC01006-208ENST00000624071 PRG4Q92954 1404 aaPredicted RBP32■■■□□ 2.71
LINC01006-208ENST00000624071 KIAA0586Q9BVV6 1533 aa32■■■□□ 2.71
LINC01006-208ENST00000624071 SHROOM2Q13796 1616 aa32■■■□□ 2.71
LINC01006-208ENST00000624071 RAPGEF2Q9Y4G8 1499 aa31.99■■■□□ 2.71
LINC01006-208ENST00000624071 FAM9AQ8IZU1 332 aaPredicted RBP31.91■■■□□ 2.7
LINC01006-208ENST00000624071 CSRNP3Q8WYN3 585 aa31.89■■■□□ 2.7
LINC01006-208ENST00000624071 PRXQ9BXM0 1461 aa31.86■■■□□ 2.69
LINC01006-208ENST00000624071 EEA1Q15075 1411 aa31.79■■■□□ 2.68
LINC01006-208ENST00000624071 IQGAP2Q13576 1575 aa31.77■■■□□ 2.68
LINC01006-208ENST00000624071 TTBK1Q5TCY1 1321 aaPredicted RBP31.73■■■□□ 2.67
LINC01006-208ENST00000624071 CARMIL2Q6F5E8 1435 aa31.68■■■□□ 2.66
LINC01006-208ENST00000624071 TRHP20396 242 aaPredicted RBP31.66■■■□□ 2.66
LINC01006-208ENST00000624071 PTPRGP23470 1445 aa31.62■■■□□ 2.65
LINC01006-208ENST00000624071 UGGT2Q9NYU1 1516 aa31.61■■■□□ 2.65
LINC01006-208ENST00000624071 DISP1Q96F81 1524 aa31.6■■■□□ 2.65
LINC01006-208ENST00000624071 TNIKQ9UKE5 1360 aa31.6■■■□□ 2.65
LINC01006-208ENST00000624071 EHMT2Q96KQ7 1210 aa31.56■■■□□ 2.64
LINC01006-208ENST00000624071 CTTNBP2Q8WZ74 1663 aa31.56■■■□□ 2.64
LINC01006-208ENST00000624071 NPM1P06748 294 aaKnown RBP eCLIP31.48■■■□□ 2.63
LINC01006-208ENST00000624071 KIAA0556O60303 1618 aa31.48■■■□□ 2.63
LINC01006-208ENST00000624071 RANGAP1P46060 587 aaPredicted RBP31.45■■■□□ 2.63
LINC01006-208ENST00000624071 KIF21BO75037 1637 aa31.45■■■□□ 2.62
LINC01006-208ENST00000624071 ADCY10Q96PN6 1610 aa31.45■■■□□ 2.62
LINC01006-208ENST00000624071 GOLGA3Q08378 1498 aa31.44■■■□□ 2.62
LINC01006-208ENST00000624071 P3H3Q8IVL6 736 aa31.43■■■□□ 2.62
LINC01006-208ENST00000624071 UBTFP17480 764 aaKnown RBP31.38■■■□□ 2.61
LINC01006-208ENST00000624071 UACAQ9BZF9 1416 aa31.37■■■□□ 2.61
LINC01006-208ENST00000624071 UHRF1BP1LA0JNW5 1464 aa31.28■■■□□ 2.6
LINC01006-208ENST00000624071 ABCC2Q92887 1545 aa31.28■■■□□ 2.6
LINC01006-208ENST00000624071 PLB1Q6P1J6 1458 aa31.27■■■□□ 2.6
LINC01006-208ENST00000624071 MAPKBP1O60336 1514 aa31.24■■■□□ 2.59
LINC01006-208ENST00000624071 SAMD9Q5K651 1589 aa31.22■■■□□ 2.59
LINC01006-208ENST00000624071 FAM69CQ0P6D2 419 aa31.2■■■□□ 2.59
LINC01006-208ENST00000624071 FHOD3Q2V2M9 1422 aa31.17■■■□□ 2.58
LINC01006-208ENST00000624071 ABCC10Q5T3U5 1492 aa31.16■■■□□ 2.58
LINC01006-208ENST00000624071 KDM5BQ9UGL1 1544 aa31.15■■■□□ 2.58
LINC01006-208ENST00000624071 ABCA8O94911 1581 aa31.15■■■□□ 2.58
LINC01006-208ENST00000624071 ASXL2Q76L83 1435 aa31.14■■■□□ 2.58
LINC01006-208ENST00000624071 ARID3CA6NKF2 412 aa31.13■■■□□ 2.57
LINC01006-208ENST00000624071 DIP2BQ9P265 1576 aa31.07■■■□□ 2.56
LINC01006-208ENST00000624071 EFCAB5A4FU69 1503 aa31.07■■■□□ 2.56
LINC01006-208ENST00000624071 ZCCHC11Q5TAX3 1644 aaKnown RBP31.06■■■□□ 2.56
LINC01006-208ENST00000624071 KIF13AQ9H1H9 1805 aa31.05■■■□□ 2.56
LINC01006-208ENST00000624071 ARHGAP35Q9NRY4 1499 aa30.99■■■□□ 2.55
LINC01006-208ENST00000624071 ATP10BO94823 1461 aa30.95■■■□□ 2.55
LINC01006-208ENST00000624071 RAPGEF6Q8TEU7 1601 aa30.95■■■□□ 2.55
LINC01006-208ENST00000624071 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.94■■■□□ 2.54
LINC01006-208ENST00000624071 HNRNPUL2Q1KMD3 747 aaKnown RBP30.94■■■□□ 2.54
LINC01006-208ENST00000624071 KCNH8Q96L42 1107 aa30.93■■■□□ 2.54
LINC01006-208ENST00000624071 WDR7Q9Y4E6 1490 aa30.93■■■□□ 2.54
LINC01006-208ENST00000624071 EPRSP07814 1512 aaKnown RBP30.93■■■□□ 2.54
LINC01006-208ENST00000624071 NUP153P49790 1475 aaKnown RBP30.9■■■□□ 2.54
LINC01006-208ENST00000624071 ATP1B4Q9UN42 357 aaPredicted RBP30.87■■■□□ 2.53
LINC01006-208ENST00000624071 GLI2P10070 1586 aa30.86■■■□□ 2.53
LINC01006-208ENST00000624071 FMN1Q68DA7 1419 aa30.83■■■□□ 2.53
LINC01006-208ENST00000624071 LOC105371045A0A1W2PR82 267 aa30.81■■■□□ 2.52
LINC01006-208ENST00000624071 CLIP1P30622 1438 aa30.81■■■□□ 2.52
LINC01006-208ENST00000624071 TSPOAP1O95153 1857 aa30.79■■■□□ 2.52
LINC01006-208ENST00000624071 PLEKHD1A6NEE1 506 aa30.72■■■□□ 2.51
LINC01006-208ENST00000624071 CDK13Q14004 1512 aaKnown RBP30.71■■■□□ 2.51
LINC01006-208ENST00000624071 MAP3K4Q9Y6R4 1608 aa30.7■■■□□ 2.51
LINC01006-208ENST00000624071 CD109Q6YHK3 1445 aa30.7■■■□□ 2.5
LINC01006-208ENST00000624071 PPRC1Q5VV67 1664 aaKnown RBP30.66■■■□□ 2.5
LINC01006-208ENST00000624071 HECW1Q76N89 1606 aa30.65■■■□□ 2.5
LINC01006-208ENST00000624071 CEP162Q5TB80 1403 aa30.64■■■□□ 2.5
LINC01006-208ENST00000624071 TEX14Q8IWB6 1497 aa30.62■■■□□ 2.49
LINC01006-208ENST00000624071 KDM6BO15054 1643 aa30.61■■■□□ 2.49
LINC01006-208ENST00000624071 CASKIN1Q8WXD9 1431 aa30.6■■■□□ 2.49
LINC01006-208ENST00000624071 CFAP43Q8NDM7 1665 aa30.58■■■□□ 2.49
LINC01006-208ENST00000624071 PCF11O94913 1555 aaKnown RBP30.58■■■□□ 2.49
LINC01006-208ENST00000624071 MAGI3Q5TCQ9 1506 aa30.57■■■□□ 2.49
LINC01006-208ENST00000624071 CDK11AQ9UQ88 783 aaPredicted RBP30.54■■■□□ 2.48
LINC01006-208ENST00000624071 ABCA9Q8IUA7 1624 aa30.54■■■□□ 2.48
LINC01006-208ENST00000624071 COL17A1Q9UMD9 1497 aaPredicted RBP30.52■■■□□ 2.48
LINC01006-208ENST00000624071 FYCO1Q9BQS8 1478 aa30.49■■■□□ 2.47
LINC01006-208ENST00000624071 LRRIQ1Q96JM4 1722 aa30.45■■■□□ 2.47
LINC01006-208ENST00000624071 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.45■■■□□ 2.47
LINC01006-208ENST00000624071 CCDC18Q5T9S5 1454 aa30.44■■■□□ 2.46
LINC01006-208ENST00000624071 TROQ12816 1431 aaPredicted RBP30.43■■■□□ 2.46
LINC01006-208ENST00000624071 TTC37Q6PGP7 1564 aa30.4■■■□□ 2.46
LINC01006-208ENST00000624071 KIF14Q15058 1648 aa30.35■■■□□ 2.45
LINC01006-208ENST00000624071 NEO1Q92859 1461 aa30.33■■■□□ 2.45
LINC01006-208ENST00000624071 PHLDB1Q86UU1 1377 aa30.32■■■□□ 2.44
LINC01006-208ENST00000624071 FANCAO15360 1455 aa30.31■■■□□ 2.44
LINC01006-208ENST00000624071 ARAP3Q8WWN8 1544 aa30.3■■■□□ 2.44
LINC01006-208ENST00000624071 PLCH2O75038 1416 aa30.3■■■□□ 2.44
LINC01006-208ENST00000624071 RAPGEF3O95398 923 aa30.29■■■□□ 2.44
LINC01006-208ENST00000624071 AKNAQ7Z591 1439 aa30.27■■■□□ 2.44
LINC01006-208ENST00000624071 VPS8Q8N3P4 1428 aa30.25■■■□□ 2.43
LINC01006-208ENST00000624071 EFCAB2Q5VUJ9 269 aa30.23■■■□□ 2.43
LINC01006-208ENST00000624071 MTUS2Q5JR59 1369 aa30.22■■■□□ 2.43
LINC01006-208ENST00000624071 DENND4BO75064 1496 aaPredicted RBP30.17■■■□□ 2.42
LINC01006-208ENST00000624071 ARHGAP5Q13017 1502 aa30.17■■■□□ 2.42
LINC01006-208ENST00000624071 CFAP74Q9C0B2 1584 aa30.16■■■□□ 2.42
LINC01006-208ENST00000624071 MYO5CQ9NQX4 1742 aa30.16■■■□□ 2.42
LINC01006-208ENST00000624071 ADGRL1O94910 1474 aa30.14■■■□□ 2.42
LINC01006-208ENST00000624071 SCAPERQ9BY12 1400 aa30.13■■■□□ 2.41
LINC01006-208ENST00000624071 FRMPD1Q5SYB0 1578 aa30.11■■■□□ 2.41
LINC01006-208ENST00000624071 AEBP2Q6ZN18 517 aaPredicted RBP30.09■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms