RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 JPH4Q96JJ6 628 aa21.2■□□□□ 0.98
LINC00963-217ENST00000624009 ERCC6L2Q5T890 1561 aa21.19■□□□□ 0.98
LINC00963-217ENST00000624009 PRG4Q92954 1404 aaPredicted RBP21.17■□□□□ 0.98
LINC00963-217ENST00000624009 RAPGEF2Q9Y4G8 1499 aa21.14■□□□□ 0.98
LINC00963-217ENST00000624009 IQGAP2Q13576 1575 aa21.08■□□□□ 0.97
LINC00963-217ENST00000624009 PRXQ9BXM0 1461 aa21.04■□□□□ 0.96
LINC00963-217ENST00000624009 EEA1Q15075 1411 aa21.03■□□□□ 0.96
LINC00963-217ENST00000624009 CARMIL2Q6F5E8 1435 aa21.01■□□□□ 0.95
LINC00963-217ENST00000624009 CTTNBP2Q8WZ74 1663 aa20.99■□□□□ 0.95
LINC00963-217ENST00000624009 UGGT2Q9NYU1 1516 aa20.99■□□□□ 0.95
LINC00963-217ENST00000624009 TRHP20396 242 aaPredicted RBP20.93■□□□□ 0.94
LINC00963-217ENST00000624009 TNIKQ9UKE5 1360 aa20.93■□□□□ 0.94
LINC00963-217ENST00000624009 CSRNP3Q8WYN3 585 aa20.92■□□□□ 0.94
LINC00963-217ENST00000624009 DISP1Q96F81 1524 aa20.92■□□□□ 0.94
LINC00963-217ENST00000624009 PTPRGP23470 1445 aa20.91■□□□□ 0.94
LINC00963-217ENST00000624009 ADCY10Q96PN6 1610 aa20.91■□□□□ 0.94
LINC00963-217ENST00000624009 MAPKBP1O60336 1514 aa20.88■□□□□ 0.93
LINC00963-217ENST00000624009 KIAA0556O60303 1618 aa20.87■□□□□ 0.93
LINC00963-217ENST00000624009 GOLGA3Q08378 1498 aa20.86■□□□□ 0.93
LINC00963-217ENST00000624009 UHRF1BP1LA0JNW5 1464 aa20.84■□□□□ 0.93
LINC00963-217ENST00000624009 CHIC1Q5VXU3 224 aa20.84■□□□□ 0.93
LINC00963-217ENST00000624009 NPM1P06748 294 aaKnown RBP eCLIP20.83■□□□□ 0.93
LINC00963-217ENST00000624009 KIF13AQ9H1H9 1805 aa20.81■□□□□ 0.92
LINC00963-217ENST00000624009 ABCC2Q92887 1545 aa20.79■□□□□ 0.92
LINC00963-217ENST00000624009 KIF21BO75037 1637 aa20.79■□□□□ 0.92
LINC00963-217ENST00000624009 UACAQ9BZF9 1416 aa20.78■□□□□ 0.92
LINC00963-217ENST00000624009 ABCC10Q5T3U5 1492 aa20.76■□□□□ 0.91
LINC00963-217ENST00000624009 KDM5BQ9UGL1 1544 aa20.73■□□□□ 0.91
LINC00963-217ENST00000624009 DIP2BQ9P265 1576 aa20.72■□□□□ 0.91
LINC00963-217ENST00000624009 SAMD9Q5K651 1589 aa20.71■□□□□ 0.91
LINC00963-217ENST00000624009 PLB1Q6P1J6 1458 aa20.69■□□□□ 0.9
LINC00963-217ENST00000624009 ABCA8O94911 1581 aa20.67■□□□□ 0.9
LINC00963-217ENST00000624009 FAM9AQ8IZU1 332 aaPredicted RBP20.65■□□□□ 0.9
LINC00963-217ENST00000624009 TTBK1Q5TCY1 1321 aaPredicted RBP20.64■□□□□ 0.89
LINC00963-217ENST00000624009 ZCCHC11Q5TAX3 1644 aaKnown RBP20.64■□□□□ 0.89
LINC00963-217ENST00000624009 ASXL2Q76L83 1435 aa20.63■□□□□ 0.89
LINC00963-217ENST00000624009 FAM69CQ0P6D2 419 aa20.63■□□□□ 0.89
LINC00963-217ENST00000624009 GLI2P10070 1586 aa20.63■□□□□ 0.89
LINC00963-217ENST00000624009 EFCAB5A4FU69 1503 aa20.6■□□□□ 0.89
LINC00963-217ENST00000624009 EPRSP07814 1512 aaKnown RBP20.53■□□□□ 0.88
LINC00963-217ENST00000624009 WDR7Q9Y4E6 1490 aa20.53■□□□□ 0.88
LINC00963-217ENST00000624009 RAPGEF6Q8TEU7 1601 aa20.52■□□□□ 0.88
LINC00963-217ENST00000624009 TSPOAP1O95153 1857 aa20.52■□□□□ 0.87
LINC00963-217ENST00000624009 MAP3K4Q9Y6R4 1608 aa20.49■□□□□ 0.87
LINC00963-217ENST00000624009 UBTFP17480 764 aaKnown RBP20.47■□□□□ 0.87
LINC00963-217ENST00000624009 P3H3Q8IVL6 736 aa20.47■□□□□ 0.87
LINC00963-217ENST00000624009 PPRC1Q5VV67 1664 aaKnown RBP20.47■□□□□ 0.87
LINC00963-217ENST00000624009 FHOD3Q2V2M9 1422 aa20.45■□□□□ 0.86
LINC00963-217ENST00000624009 ATP10BO94823 1461 aa20.45■□□□□ 0.86
LINC00963-217ENST00000624009 CFAP43Q8NDM7 1665 aa20.44■□□□□ 0.86
LINC00963-217ENST00000624009 TEX14Q8IWB6 1497 aa20.43■□□□□ 0.86
LINC00963-217ENST00000624009 NUP153P49790 1475 aaKnown RBP20.42■□□□□ 0.86
LINC00963-217ENST00000624009 KDM6BO15054 1643 aa20.41■□□□□ 0.86
LINC00963-217ENST00000624009 FMN1Q68DA7 1419 aa20.39■□□□□ 0.85
LINC00963-217ENST00000624009 ARHGAP35Q9NRY4 1499 aa20.38■□□□□ 0.85
LINC00963-217ENST00000624009 MAGI3Q5TCQ9 1506 aa20.37■□□□□ 0.85
LINC00963-217ENST00000624009 RANGAP1P46060 587 aaPredicted RBP20.35■□□□□ 0.85
LINC00963-217ENST00000624009 ABCA9Q8IUA7 1624 aa20.34■□□□□ 0.85
LINC00963-217ENST00000624009 CD109Q6YHK3 1445 aa20.33■□□□□ 0.84
LINC00963-217ENST00000624009 KCNH8Q96L42 1107 aa20.3■□□□□ 0.84
LINC00963-217ENST00000624009 HECW1Q76N89 1606 aa20.3■□□□□ 0.84
LINC00963-217ENST00000624009 PHLDB1Q86UU1 1377 aa20.27■□□□□ 0.84
LINC00963-217ENST00000624009 PLEKHD1A6NEE1 506 aa20.26■□□□□ 0.83
LINC00963-217ENST00000624009 EHMT2Q96KQ7 1210 aa20.26■□□□□ 0.83
LINC00963-217ENST00000624009 ARID3CA6NKF2 412 aa20.25■□□□□ 0.83
LINC00963-217ENST00000624009 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.25■□□□□ 0.83
LINC00963-217ENST00000624009 HNRNPUL2Q1KMD3 747 aaKnown RBP20.25■□□□□ 0.83
LINC00963-217ENST00000624009 COL17A1Q9UMD9 1497 aaPredicted RBP20.22■□□□□ 0.83
LINC00963-217ENST00000624009 ARAP3Q8WWN8 1544 aa20.22■□□□□ 0.83
LINC00963-217ENST00000624009 NEO1Q92859 1461 aa20.2■□□□□ 0.82
LINC00963-217ENST00000624009 CLIP1P30622 1438 aa20.19■□□□□ 0.82
LINC00963-217ENST00000624009 CASKIN1Q8WXD9 1431 aa20.19■□□□□ 0.82
LINC00963-217ENST00000624009 CDK13Q14004 1512 aaKnown RBP20.19■□□□□ 0.82
LINC00963-217ENST00000624009 CDK11AQ9UQ88 783 aaPredicted RBP20.19■□□□□ 0.82
LINC00963-217ENST00000624009 CCDC18Q5T9S5 1454 aa20.17■□□□□ 0.82
LINC00963-217ENST00000624009 FYCO1Q9BQS8 1478 aa20.16■□□□□ 0.82
LINC00963-217ENST00000624009 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.16■□□□□ 0.822e-6■■■□□ 16.6
LINC00963-217ENST00000624009 LRRIQ1Q96JM4 1722 aa20.16■□□□□ 0.82
LINC00963-217ENST00000624009 CFAP74Q9C0B2 1584 aa20.14■□□□□ 0.81
LINC00963-217ENST00000624009 PCF11O94913 1555 aaKnown RBP20.13■□□□□ 0.81
LINC00963-217ENST00000624009 TTC37Q6PGP7 1564 aa20.12■□□□□ 0.81
LINC00963-217ENST00000624009 TROQ12816 1431 aaPredicted RBP20.1■□□□□ 0.81
LINC00963-217ENST00000624009 KIF14Q15058 1648 aa20.09■□□□□ 0.81
LINC00963-217ENST00000624009 ATP1B4Q9UN42 357 aaPredicted RBP20.08■□□□□ 0.81
LINC00963-217ENST00000624009 MYO5CQ9NQX4 1742 aa20.07■□□□□ 0.8
LINC00963-217ENST00000624009 FANCAO15360 1455 aa20.06■□□□□ 0.8
LINC00963-217ENST00000624009 PLCH2O75038 1416 aa20.06■□□□□ 0.8
LINC00963-217ENST00000624009 CEP162Q5TB80 1403 aa20.06■□□□□ 0.8
LINC00963-217ENST00000624009 AKNAQ7Z591 1439 aa20.03■□□□□ 0.8
LINC00963-217ENST00000624009 AEBP2Q6ZN18 517 aaPredicted RBP20.03■□□□□ 0.8
LINC00963-217ENST00000624009 RICTORQ6R327 1708 aa20.01■□□□□ 0.79
LINC00963-217ENST00000624009 FRMPD1Q5SYB0 1578 aa20■□□□□ 0.79
LINC00963-217ENST00000624009 DENND4BO75064 1496 aaPredicted RBP19.99■□□□□ 0.79
LINC00963-217ENST00000624009 ZMYM4Q5VZL5 1548 aa19.97■□□□□ 0.79
LINC00963-217ENST00000624009 EFCAB2Q5VUJ9 269 aa19.96■□□□□ 0.79
LINC00963-217ENST00000624009 ADGRL1O94910 1474 aa19.95■□□□□ 0.78
LINC00963-217ENST00000624009 KDM4FA0A1W2PPD8 638 aa19.95■□□□□ 0.78
LINC00963-217ENST00000624009 CDC42BPBQ9Y5S2 1711 aa19.95■□□□□ 0.78
LINC00963-217ENST00000624009 PREX2Q70Z35 1606 aa19.94■□□□□ 0.78
LINC00963-217ENST00000624009 MAGI2Q86UL8 1455 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms