RNA–Protein interactions for RNA: ENST00000623652.1

PPM1F-210, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 5

Gene PPM1F, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-210ENST00000623652 NBR1Q14596 966 aa12.69□□□□□ -0.38
PPM1F-210ENST00000623652 KANK4Q5T7N3 995 aaPredicted RBP12.68□□□□□ -0.38
PPM1F-210ENST00000623652 MYT1LQ9UL68 1186 aa12.67□□□□□ -0.38
PPM1F-210ENST00000623652 TULP1O00294 542 aaPredicted RBP12.65□□□□□ -0.38
PPM1F-210ENST00000623652 SIN3AQ96ST3 1273 aa12.63□□□□□ -0.39
PPM1F-210ENST00000623652 PPP1R15AO75807 674 aaPredicted RBP12.62□□□□□ -0.39
PPM1F-210ENST00000623652 HNRNPUQ00839 825 aaKnown RBP eCLIP12.62□□□□□ -0.39
PPM1F-210ENST00000623652 TOP2AP11388 1531 aaKnown RBP12.61□□□□□ -0.39
PPM1F-210ENST00000623652 CCER2I3L3R5 266 aa12.61□□□□□ -0.39
PPM1F-210ENST00000623652 ADRA2BP18089 450 aa12.61□□□□□ -0.39
PPM1F-210ENST00000623652 RAPGEF2Q9Y4G8 1499 aa12.61□□□□□ -0.39
PPM1F-210ENST00000623652 SLC4A1APQ9BWU0 796 aaKnown RBP12.61□□□□□ -0.39
PPM1F-210ENST00000623652 SMARCA2P51531 1590 aa12.6□□□□□ -0.39
PPM1F-210ENST00000623652 KIF21BO75037 1637 aa12.6□□□□□ -0.39
PPM1F-210ENST00000623652 KLHL34Q8N239 644 aa12.59□□□□□ -0.39
PPM1F-210ENST00000623652 UBE2Q2Q8WVN8 375 aa12.59□□□□□ -0.39
PPM1F-210ENST00000623652 SALL2Q9Y467 1007 aaPredicted RBP12.57□□□□□ -0.4
PPM1F-210ENST00000623652 PKNOX2Q96KN3 472 aa12.57□□□□□ -0.4
PPM1F-210ENST00000623652 RAB3GAP2Q9H2M9 1393 aa12.56□□□□□ -0.4
PPM1F-210ENST00000623652 SMARCA4P51532 1647 aa12.56□□□□□ -0.4
PPM1F-210ENST00000623652 NOP58Q9Y2X3 529 aaKnown RBP12.55□□□□□ -0.4
PPM1F-210ENST00000623652 CCNB3Q8WWL7 1395 aa12.55□□□□□ -0.4
PPM1F-210ENST00000623652 B4GALNT3Q6L9W6 998 aa12.55□□□□□ -0.4
PPM1F-210ENST00000623652 WDR97A6NE52 1622 aa12.54□□□□□ -0.4
PPM1F-210ENST00000623652 PAK3O75914 559 aaPredicted RBP12.53□□□□□ -0.4
PPM1F-210ENST00000623652 PPP4R2Q9NY27 417 aa12.52□□□□□ -0.41
PPM1F-210ENST00000623652 BAZ1BQ9UIG0 1483 aaKnown RBP12.52□□□□□ -0.41
PPM1F-210ENST00000623652 RRBP1Q9P2E9 1410 aaKnown RBP12.51□□□□□ -0.41
PPM1F-210ENST00000623652 RTL5Q5HYW3 569 aaPredicted RBP12.51□□□□□ -0.41
PPM1F-210ENST00000623652 TAOK2Q9UL54 1235 aa12.51□□□□□ -0.41
PPM1F-210ENST00000623652 TPRNQ4KMQ1 711 aa12.49□□□□□ -0.41
PPM1F-210ENST00000623652 PEG3Q9GZU2 1588 aa12.49□□□□□ -0.41
PPM1F-210ENST00000623652 MAPKBP1O60336 1514 aa12.49□□□□□ -0.41
PPM1F-210ENST00000623652 IL27Q8NEV9 243 aa12.48□□□□□ -0.41
PPM1F-210ENST00000623652 SYNJ1O43426 1573 aa12.47□□□□□ -0.41
PPM1F-210ENST00000623652 FAM50AQ14320 339 aaKnown RBP12.46□□□□□ -0.41
PPM1F-210ENST00000623652 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.46□□□□□ -0.41
PPM1F-210ENST00000623652 CUX2O14529 1486 aa12.46□□□□□ -0.42
PPM1F-210ENST00000623652 ERICH6BQ5W0A0 696 aa12.45□□□□□ -0.42
PPM1F-210ENST00000623652 ARAP1Q96P48 1450 aa12.44□□□□□ -0.42
PPM1F-210ENST00000623652 ZBTB22O15209 634 aa12.43□□□□□ -0.42
PPM1F-210ENST00000623652 SETD5Q9C0A6 1442 aa12.43□□□□□ -0.42
PPM1F-210ENST00000623652 ANP32AP39687 249 aaKnown RBP12.42□□□□□ -0.42
PPM1F-210ENST00000623652 ZBTB47Q9UFB7 747 aaPredicted RBP12.41□□□□□ -0.42
PPM1F-210ENST00000623652 ATP1B4Q9UN42 357 aaPredicted RBP12.41□□□□□ -0.42
PPM1F-210ENST00000623652 FAM9BQ8IZU0 186 aa12.4□□□□□ -0.42
PPM1F-210ENST00000623652 CC2D2AQ9P2K1 1620 aa12.39□□□□□ -0.43
PPM1F-210ENST00000623652 IPO9Q96P70 1041 aaKnown RBP12.38□□□□□ -0.43
PPM1F-210ENST00000623652 TONSLQ96HA7 1378 aa12.38□□□□□ -0.43
PPM1F-210ENST00000623652 A0A0U1RQG5 324 aaPredicted RBP12.36□□□□□ -0.43
PPM1F-210ENST00000623652 CCDC184Q52MB2 194 aa12.36□□□□□ -0.43
PPM1F-210ENST00000623652 NPM2Q86SE8 214 aaKnown RBP12.34□□□□□ -0.43
PPM1F-210ENST00000623652 ATAD2BQ9ULI0 1458 aa12.34□□□□□ -0.43
PPM1F-210ENST00000623652 HMGXB3Q12766 1538 aa12.34□□□□□ -0.43
PPM1F-210ENST00000623652 LAS1LQ9Y4W2 734 aaKnown RBP12.32□□□□□ -0.44
PPM1F-210ENST00000623652 MRS2Q9HD23 443 aa12.31□□□□□ -0.44
PPM1F-210ENST00000623652 CNGB1Q14028 1251 aaPredicted RBP12.3□□□□□ -0.44
PPM1F-210ENST00000623652 NCAPD3P42695 1498 aa12.3□□□□□ -0.44
PPM1F-210ENST00000623652 NEFMP07197 916 aa12.3□□□□□ -0.44
PPM1F-210ENST00000623652 PDE4CQ08493 712 aa12.3□□□□□ -0.44
PPM1F-210ENST00000623652 SENP3-EIF4A1A0A087X0R7 540 aa12.28□□□□□ -0.44
PPM1F-210ENST00000623652 P3H3Q8IVL6 736 aa12.28□□□□□ -0.44
PPM1F-210ENST00000623652 PRXQ9BXM0 1461 aa12.28□□□□□ -0.44
PPM1F-210ENST00000623652 PHLDB1Q86UU1 1377 aa12.28□□□□□ -0.44
PPM1F-210ENST00000623652 PDIA4P13667 645 aaKnown RBP12.28□□□□□ -0.44
PPM1F-210ENST00000623652 WASHC2AQ641Q2 1341 aa12.27□□□□□ -0.45
PPM1F-210ENST00000623652 ARHGAP35Q9NRY4 1499 aa12.26□□□□□ -0.45
PPM1F-210ENST00000623652 ZBED9Q6R2W3 1325 aa12.25□□□□□ -0.45
PPM1F-210ENST00000623652 HSPA5P11021 654 aaKnown RBP12.25□□□□□ -0.45
PPM1F-210ENST00000623652 ERICH3Q5RHP9 1530 aa12.25□□□□□ -0.45
PPM1F-210ENST00000623652 HAP1P54257 671 aaPredicted RBP12.25□□□□□ -0.45
PPM1F-210ENST00000623652 ARXQ96QS3 562 aa12.23□□□□□ -0.45
PPM1F-210ENST00000623652 AKNAQ7Z591 1439 aa12.23□□□□□ -0.45
PPM1F-210ENST00000623652 PRKRIP1Q9H875 184 aaPredicted RBP12.22□□□□□ -0.45
PPM1F-210ENST00000623652 BCL11BQ9C0K0 894 aaPredicted RBP12.22□□□□□ -0.45
PPM1F-210ENST00000623652 BRPF3Q9ULD4 1205 aa12.22□□□□□ -0.45
PPM1F-210ENST00000623652 EIF4G2P78344 907 aaKnown RBP eCLIP12.2□□□□□ -0.46
PPM1F-210ENST00000623652 LRRC9Q6ZRR7 1453 aa12.18□□□□□ -0.46
PPM1F-210ENST00000623652 USP35Q9P2H5 1018 aa12.17□□□□□ -0.46
PPM1F-210ENST00000623652 TOP2BQ02880 1626 aa12.17□□□□□ -0.46
PPM1F-210ENST00000623652 TIAM1Q13009 1591 aa12.17□□□□□ -0.46
PPM1F-210ENST00000623652 FHAD1B1AJZ9 1412 aa12.17□□□□□ -0.46
PPM1F-210ENST00000623652 KIF27Q86VH2 1401 aa12.16□□□□□ -0.46
PPM1F-210ENST00000623652 C11orf95C9JLR9 678 aaPredicted RBP12.15□□□□□ -0.46
PPM1F-210ENST00000623652 NUDCQ9Y266 331 aa12.15□□□□□ -0.46
PPM1F-210ENST00000623652 CNTLNQ9NXG0 1405 aa12.14□□□□□ -0.47
PPM1F-210ENST00000623652 PLCB2Q00722 1185 aa12.14□□□□□ -0.47
PPM1F-210ENST00000623652 PPM1GO15355 546 aaPredicted RBP12.14□□□□□ -0.47
PPM1F-210ENST00000623652 POLR3GLQ9BT43 218 aa12.14□□□□□ -0.47
PPM1F-210ENST00000623652 WASHC2CQ9Y4E1 1318 aa12.13□□□□□ -0.47
PPM1F-210ENST00000623652 PDE4AP27815 886 aa12.12□□□□□ -0.47
PPM1F-210ENST00000623652 GSE1Q14687 1217 aa12.12□□□□□ -0.47
PPM1F-210ENST00000623652 CCDC18Q5T9S5 1454 aa12.11□□□□□ -0.47
PPM1F-210ENST00000623652 DNAJC5BQ9UF47 199 aa12.11□□□□□ -0.47
PPM1F-210ENST00000623652 SMG6Q86US8 1419 aaKnown RBP12.1□□□□□ -0.47
PPM1F-210ENST00000623652 PRDM2Q13029 1718 aa12.09□□□□□ -0.47
PPM1F-210ENST00000623652 UACAQ9BZF9 1416 aa12.09□□□□□ -0.47
PPM1F-210ENST00000623652 CCDC7Q96M83 1385 aa12.08□□□□□ -0.48
PPM1F-210ENST00000623652 DHX37Q8IY37 1157 aaKnown RBP12.08□□□□□ -0.48
PPM1F-210ENST00000623652 TCERG1O14776 1098 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms