RNA–Protein interactions for RNA: ENST00000623529.1

LINC01561-202, Transcript of long intergenic non-protein coding RNA 1561, humanhuman

Gene LINC01561, Length 2,160 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561-202ENST00000623529 SNAPC4Q5SXM2 1469 aa16.15■□□□□ 0.18
LINC01561-202ENST00000623529 CUL7Q14999 1698 aa16.14■□□□□ 0.17
LINC01561-202ENST00000623529 FHAD1B1AJZ9 1412 aa16.14■□□□□ 0.17
LINC01561-202ENST00000623529 RANGAP1P46060 587 aaPredicted RBP16.13■□□□□ 0.17
LINC01561-202ENST00000623529 SLC24A1O60721 1099 aa16.11■□□□□ 0.17
LINC01561-202ENST00000623529 FBLN2P98095 1184 aa16.1■□□□□ 0.17
LINC01561-202ENST00000623529 ADAMTS12P58397 1594 aa16.1■□□□□ 0.17
LINC01561-202ENST00000623529 CHMP7Q8WUX9 453 aaPredicted RBP16.09■□□□□ 0.17
LINC01561-202ENST00000623529 MAGI1Q96QZ7 1491 aaPredicted RBP16.08■□□□□ 0.17
LINC01561-202ENST00000623529 CEP162Q5TB80 1403 aa16.08■□□□□ 0.16
LINC01561-202ENST00000623529 SYNJ2O15056 1496 aa16.04■□□□□ 0.16
LINC01561-202ENST00000623529 ARAP1Q96P48 1450 aa16.03■□□□□ 0.16
LINC01561-202ENST00000623529 GRIN2AQ12879 1464 aa16.02■□□□□ 0.16
LINC01561-202ENST00000623529 CLIP1P30622 1438 aa16■□□□□ 0.15
LINC01561-202ENST00000623529 P3H3Q8IVL6 736 aa15.96■□□□□ 0.14
LINC01561-202ENST00000623529 TTBK1Q5TCY1 1321 aaPredicted RBP15.95■□□□□ 0.14
LINC01561-202ENST00000623529 CEP170Q5SW79 1584 aa15.94■□□□□ 0.14
LINC01561-202ENST00000623529 ARHGAP35Q9NRY4 1499 aa15.94■□□□□ 0.14
LINC01561-202ENST00000623529 NUP160Q12769 1436 aa15.93■□□□□ 0.14
LINC01561-202ENST00000623529 CTTNBP2Q8WZ74 1663 aa15.93■□□□□ 0.14
LINC01561-202ENST00000623529 KIAA0586Q9BVV6 1533 aa15.92■□□□□ 0.14
LINC01561-202ENST00000623529 CHD1O14646 1710 aa15.91■□□□□ 0.14
LINC01561-202ENST00000623529 ILDR1Q86SU0 546 aaPredicted RBP15.9■□□□□ 0.14
LINC01561-202ENST00000623529 JPH4Q96JJ6 628 aa15.89■□□□□ 0.13
LINC01561-202ENST00000623529 IQGAP2Q13576 1575 aa15.87■□□□□ 0.13
LINC01561-202ENST00000623529 FHOD3Q2V2M9 1422 aa15.84■□□□□ 0.13
LINC01561-202ENST00000623529 PPARGC1BQ86YN6 1023 aaKnown RBP15.82■□□□□ 0.12
LINC01561-202ENST00000623529 UGGT2Q9NYU1 1516 aa15.82■□□□□ 0.12
LINC01561-202ENST00000623529 VPS8Q8N3P4 1428 aa15.81■□□□□ 0.12
LINC01561-202ENST00000623529 SAMD9Q5K651 1589 aa15.8■□□□□ 0.12
LINC01561-202ENST00000623529 DISP1Q96F81 1524 aa15.8■□□□□ 0.12
LINC01561-202ENST00000623529 EFCAB5A4FU69 1503 aa15.79■□□□□ 0.12
LINC01561-202ENST00000623529 HRCP23327 699 aa15.76■□□□□ 0.11
LINC01561-202ENST00000623529 PRG4Q92954 1404 aaPredicted RBP15.75■□□□□ 0.11
LINC01561-202ENST00000623529 CLASP1Q7Z460 1538 aa15.74■□□□□ 0.11
LINC01561-202ENST00000623529 KIAA0556O60303 1618 aa15.72■□□□□ 0.11
LINC01561-202ENST00000623529 ATP1B4Q9UN42 357 aaPredicted RBP15.72■□□□□ 0.11
LINC01561-202ENST00000623529 ERCC6L2Q5T890 1561 aa15.71■□□□□ 0.11
LINC01561-202ENST00000623529 CARMIL2Q6F5E8 1435 aa15.7■□□□□ 0.1
LINC01561-202ENST00000623529 SHROOM2Q13796 1616 aa15.7■□□□□ 0.1
LINC01561-202ENST00000623529 FMN1Q68DA7 1419 aa15.69■□□□□ 0.1
LINC01561-202ENST00000623529 KANK4Q5T7N3 995 aaPredicted RBP15.68■□□□□ 0.1
LINC01561-202ENST00000623529 CASKIN1Q8WXD9 1431 aa15.66■□□□□ 0.1
LINC01561-202ENST00000623529 APLP2Q06481 763 aa15.65■□□□□ 0.1
LINC01561-202ENST00000623529 PCF11O94913 1555 aaKnown RBP15.65■□□□□ 0.1
LINC01561-202ENST00000623529 ARID3CA6NKF2 412 aa15.63■□□□□ 0.09
LINC01561-202ENST00000623529 PTPRGP23470 1445 aa15.63■□□□□ 0.09
LINC01561-202ENST00000623529 PLB1Q6P1J6 1458 aa15.62■□□□□ 0.09
LINC01561-202ENST00000623529 FYCO1Q9BQS8 1478 aa15.6■□□□□ 0.09
LINC01561-202ENST00000623529 LRRIQ1Q96JM4 1722 aa15.57■□□□□ 0.08
LINC01561-202ENST00000623529 NUP153P49790 1475 aaKnown RBP15.56■□□□□ 0.08
LINC01561-202ENST00000623529 TIAM1Q13009 1591 aa15.55■□□□□ 0.08
LINC01561-202ENST00000623529 EPRSP07814 1512 aaKnown RBP15.54■□□□□ 0.08
LINC01561-202ENST00000623529 MAP3K1Q13233 1512 aa15.54■□□□□ 0.08
LINC01561-202ENST00000623529 RAPGEF6Q8TEU7 1601 aa15.54■□□□□ 0.08
LINC01561-202ENST00000623529 ABCA8O94911 1581 aa15.53■□□□□ 0.08
LINC01561-202ENST00000623529 CDK13Q14004 1512 aaKnown RBP15.52■□□□□ 0.08
LINC01561-202ENST00000623529 KDM4FA0A1W2PPD8 638 aa15.52■□□□□ 0.07
LINC01561-202ENST00000623529 LRRC9Q6ZRR7 1453 aa15.52■□□□□ 0.07
LINC01561-202ENST00000623529 UACAQ9BZF9 1416 aa15.51■□□□□ 0.07
LINC01561-202ENST00000623529 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.51■□□□□ 0.07
LINC01561-202ENST00000623529 TRIM26Q12899 539 aaPredicted RBP15.51■□□□□ 0.07
LINC01561-202ENST00000623529 HNRNPUL2Q1KMD3 747 aaKnown RBP15.51■□□□□ 0.07
LINC01561-202ENST00000623529 PCGF6Q9BYE7 350 aa15.51■□□□□ 0.07
LINC01561-202ENST00000623529 HECW1Q76N89 1606 aa15.5■□□□□ 0.07
LINC01561-202ENST00000623529 ATP10BO94823 1461 aa15.49■□□□□ 0.07
LINC01561-202ENST00000623529 MAGI3Q5TCQ9 1506 aa15.48■□□□□ 0.07
LINC01561-202ENST00000623529 CFAP43Q8NDM7 1665 aa15.47■□□□□ 0.07
LINC01561-202ENST00000623529 CCDC18Q5T9S5 1454 aa15.47■□□□□ 0.07
LINC01561-202ENST00000623529 MTUS2Q5JR59 1369 aa15.45■□□□□ 0.06
LINC01561-202ENST00000623529 ABCC2Q92887 1545 aa15.43■□□□□ 0.06
LINC01561-202ENST00000623529 PHLDB1Q86UU1 1377 aa15.42■□□□□ 0.06
LINC01561-202ENST00000623529 UHRF1BP1LA0JNW5 1464 aa15.41■□□□□ 0.06
LINC01561-202ENST00000623529 PLEKHD1A6NEE1 506 aa15.41■□□□□ 0.06
LINC01561-202ENST00000623529 CDK11AQ9UQ88 783 aaPredicted RBP15.41■□□□□ 0.06
LINC01561-202ENST00000623529 ADCY10Q96PN6 1610 aa15.39■□□□□ 0.05
LINC01561-202ENST00000623529 KDM5BQ9UGL1 1544 aa15.37■□□□□ 0.05
LINC01561-202ENST00000623529 NCOA2Q15596 1464 aa15.36■□□□□ 0.05
LINC01561-202ENST00000623529 TROQ12816 1431 aaPredicted RBP15.36■□□□□ 0.05
LINC01561-202ENST00000623529 EHBP1L1Q8N3D4 1523 aa15.36■□□□□ 0.05
LINC01561-202ENST00000623529 KIF13AQ9H1H9 1805 aa15.34■□□□□ 0.05
LINC01561-202ENST00000623529 KCNH8Q96L42 1107 aa15.34■□□□□ 0.05
LINC01561-202ENST00000623529 ZCCHC11Q5TAX3 1644 aaKnown RBP15.33■□□□□ 0.04
LINC01561-202ENST00000623529 RRBP1Q9P2E9 1410 aaKnown RBP15.32■□□□□ 0.04
LINC01561-202ENST00000623529 ERICH6Q7L0X2 663 aa15.31■□□□□ 0.04
LINC01561-202ENST00000623529 SUPT6HQ7KZ85 1726 aaKnown RBP15.31■□□□□ 0.04
LINC01561-202ENST00000623529 FAM69CQ0P6D2 419 aa15.31■□□□□ 0.04
LINC01561-202ENST00000623529 KIF14Q15058 1648 aa15.3■□□□□ 0.04
LINC01561-202ENST00000623529 PRKCSHP14314 528 aaPredicted RBP15.3■□□□□ 0.04
LINC01561-202ENST00000623529 CCNB3Q8WWL7 1395 aa15.3■□□□□ 0.04
LINC01561-202ENST00000623529 NPM1P06748 294 aaKnown RBP eCLIP15.29■□□□□ 0.04
LINC01561-202ENST00000623529 MYOM3Q5VTT5 1437 aa15.28■□□□□ 0.04
LINC01561-202ENST00000623529 FAM50AQ14320 339 aaKnown RBP15.27■□□□□ 0.04
LINC01561-202ENST00000623529 FGD6Q6ZV73 1430 aa15.26■□□□□ 0.03
LINC01561-202ENST00000623529 ABCC10Q5T3U5 1492 aa15.26■□□□□ 0.03
LINC01561-202ENST00000623529 ZNF644Q9H582 1327 aaPredicted RBP15.26■□□□□ 0.03
LINC01561-202ENST00000623529 ITGAEP38570 1179 aa15.25■□□□□ 0.03
LINC01561-202ENST00000623529 ASXL2Q76L83 1435 aa15.25■□□□□ 0.03
LINC01561-202ENST00000623529 GPATCH8Q9UKJ3 1502 aaKnown RBP15.25■□□□□ 0.03
LINC01561-202ENST00000623529 FBXO41Q8TF61 875 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms