RNA–Protein interactions for RNA: ENST00000623236.1

CR392039.3-201, humanhuman

TSL 5 BASIC

Gene CR392039.3, Length 227 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CR392039.3-201ENST00000623236 EIF4G3O43432 1585 aaKnown RBP12.01□□□□□ -0.49
CR392039.3-201ENST00000623236 CHMP7Q8WUX9 453 aaPredicted RBP12□□□□□ -0.49
CR392039.3-201ENST00000623236 ARAP1Q96P48 1450 aa12□□□□□ -0.49
CR392039.3-201ENST00000623236 ADAMTS12P58397 1594 aa12□□□□□ -0.49
CR392039.3-201ENST00000623236 TRIM26Q12899 539 aaPredicted RBP11.99□□□□□ -0.49
CR392039.3-201ENST00000623236 MAGI1Q96QZ7 1491 aaPredicted RBP11.99□□□□□ -0.49
CR392039.3-201ENST00000623236 PBRM1Q86U86 1689 aa11.99□□□□□ -0.49
CR392039.3-201ENST00000623236 P3H3Q8IVL6 736 aa11.98□□□□□ -0.49
CR392039.3-201ENST00000623236 PCGF6Q9BYE7 350 aa11.98□□□□□ -0.49
CR392039.3-201ENST00000623236 FBLN2P98095 1184 aa11.96□□□□□ -0.49
CR392039.3-201ENST00000623236 SYNJ2O15056 1496 aa11.95□□□□□ -0.5
CR392039.3-201ENST00000623236 GRIN2AQ12879 1464 aa11.95□□□□□ -0.5
CR392039.3-201ENST00000623236 APLP2Q06481 763 aa11.94□□□□□ -0.5
CR392039.3-201ENST00000623236 FOXD1Q16676 465 aa11.94□□□□□ -0.5
CR392039.3-201ENST00000623236 KIAA0586Q9BVV6 1533 aa11.92□□□□□ -0.5
CR392039.3-201ENST00000623236 FHOD3Q2V2M9 1422 aa11.9□□□□□ -0.5
CR392039.3-201ENST00000623236 EFCAB5A4FU69 1503 aa11.9□□□□□ -0.5
CR392039.3-201ENST00000623236 TTBK1Q5TCY1 1321 aaPredicted RBP11.89□□□□□ -0.51
CR392039.3-201ENST00000623236 NUP160Q12769 1436 aa11.88□□□□□ -0.51
CR392039.3-201ENST00000623236 CTTNBP2Q8WZ74 1663 aa11.87□□□□□ -0.51
CR392039.3-201ENST00000623236 KANK4Q5T7N3 995 aaPredicted RBP11.86□□□□□ -0.51
CR392039.3-201ENST00000623236 JPH4Q96JJ6 628 aa11.86□□□□□ -0.51
CR392039.3-201ENST00000623236 IQGAP2Q13576 1575 aa11.86□□□□□ -0.51
CR392039.3-201ENST00000623236 UGGT2Q9NYU1 1516 aa11.85□□□□□ -0.51
CR392039.3-201ENST00000623236 FMN1Q68DA7 1419 aa11.85□□□□□ -0.51
CR392039.3-201ENST00000623236 ATP1B4Q9UN42 357 aaPredicted RBP11.84□□□□□ -0.51
CR392039.3-201ENST00000623236 SAMD9Q5K651 1589 aa11.84□□□□□ -0.51
CR392039.3-201ENST00000623236 CEP170Q5SW79 1584 aa11.84□□□□□ -0.51
CR392039.3-201ENST00000623236 CASKIN1Q8WXD9 1431 aa11.83□□□□□ -0.52
CR392039.3-201ENST00000623236 DISP1Q96F81 1524 aa11.81□□□□□ -0.52
CR392039.3-201ENST00000623236 MAP3K1Q13233 1512 aa11.8□□□□□ -0.52
CR392039.3-201ENST00000623236 FYCO1Q9BQS8 1478 aa11.78□□□□□ -0.52
CR392039.3-201ENST00000623236 CARMIL2Q6F5E8 1435 aa11.77□□□□□ -0.53
CR392039.3-201ENST00000623236 PCF11O94913 1555 aaKnown RBP11.75□□□□□ -0.53
CR392039.3-201ENST00000623236 PRG4Q92954 1404 aaPredicted RBP11.74□□□□□ -0.53
CR392039.3-201ENST00000623236 TIAM1Q13009 1591 aa11.74□□□□□ -0.53
CR392039.3-201ENST00000623236 KIAA0556O60303 1618 aa11.74□□□□□ -0.53
CR392039.3-201ENST00000623236 LRRC9Q6ZRR7 1453 aa11.73□□□□□ -0.53
CR392039.3-201ENST00000623236 CHD1O14646 1710 aa11.71□□□□□ -0.54
CR392039.3-201ENST00000623236 PTPRGP23470 1445 aa11.69□□□□□ -0.54
CR392039.3-201ENST00000623236 ARID3CA6NKF2 412 aa11.69□□□□□ -0.54
CR392039.3-201ENST00000623236 OSCARQ8IYS5 282 aa11.68□□□□□ -0.54
CR392039.3-201ENST00000623236 MTUS2Q5JR59 1369 aa11.67□□□□□ -0.54
CR392039.3-201ENST00000623236 EPRSP07814 1512 aaKnown RBP11.66□□□□□ -0.54
CR392039.3-201ENST00000623236 CLASP1Q7Z460 1538 aa11.66□□□□□ -0.54
CR392039.3-201ENST00000623236 CCDC18Q5T9S5 1454 aa11.66□□□□□ -0.54
CR392039.3-201ENST00000623236 PLB1Q6P1J6 1458 aa11.66□□□□□ -0.54
CR392039.3-201ENST00000623236 PHLDB1Q86UU1 1377 aa11.66□□□□□ -0.54
CR392039.3-201ENST00000623236 NUP153P49790 1475 aaKnown RBP11.65□□□□□ -0.54
CR392039.3-201ENST00000623236 HNRNPUL2Q1KMD3 747 aaKnown RBP11.65□□□□□ -0.54
CR392039.3-201ENST00000623236 RRBP1Q9P2E9 1410 aaKnown RBP11.65□□□□□ -0.54
CR392039.3-201ENST00000623236 SHROOM2Q13796 1616 aa11.64□□□□□ -0.55
CR392039.3-201ENST00000623236 HECW1Q76N89 1606 aa11.64□□□□□ -0.55
CR392039.3-201ENST00000623236 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.64□□□□□ -0.55
CR392039.3-201ENST00000623236 CDK11AQ9UQ88 783 aaPredicted RBP11.64□□□□□ -0.55
CR392039.3-201ENST00000623236 CFAP43Q8NDM7 1665 aa11.64□□□□□ -0.55
CR392039.3-201ENST00000623236 CCNB3Q8WWL7 1395 aa11.64□□□□□ -0.55
CR392039.3-201ENST00000623236 CDK13Q14004 1512 aaKnown RBP11.62□□□□□ -0.55
CR392039.3-201ENST00000623236 HRCP23327 699 aa11.62□□□□□ -0.55
CR392039.3-201ENST00000623236 RAPGEF6Q8TEU7 1601 aa11.61□□□□□ -0.55
CR392039.3-201ENST00000623236 ABCA8O94911 1581 aa11.61□□□□□ -0.55
CR392039.3-201ENST00000623236 ERCC6L2Q5T890 1561 aa11.61□□□□□ -0.55
CR392039.3-201ENST00000623236 MAGI3Q5TCQ9 1506 aa11.6□□□□□ -0.55
CR392039.3-201ENST00000623236 UACAQ9BZF9 1416 aa11.6□□□□□ -0.55
CR392039.3-201ENST00000623236 ATP10BO94823 1461 aa11.59□□□□□ -0.55
CR392039.3-201ENST00000623236 NCOA2Q15596 1464 aa11.59□□□□□ -0.55
CR392039.3-201ENST00000623236 PLEKHD1A6NEE1 506 aa11.59□□□□□ -0.55
CR392039.3-201ENST00000623236 EHBP1L1Q8N3D4 1523 aa11.59□□□□□ -0.55
CR392039.3-201ENST00000623236 LRRIQ1Q96JM4 1722 aa11.58□□□□□ -0.56
CR392039.3-201ENST00000623236 FAM50AQ14320 339 aaKnown RBP11.58□□□□□ -0.56
CR392039.3-201ENST00000623236 TROQ12816 1431 aaPredicted RBP11.56□□□□□ -0.56
CR392039.3-201ENST00000623236 ARHGEF11O15085 1522 aa11.55□□□□□ -0.56
CR392039.3-201ENST00000623236 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.55□□□□□ -0.56
CR392039.3-201ENST00000623236 MYOM3Q5VTT5 1437 aa11.55□□□□□ -0.56
CR392039.3-201ENST00000623236 FGD6Q6ZV73 1430 aa11.55□□□□□ -0.56
CR392039.3-201ENST00000623236 ITGAEP38570 1179 aa11.55□□□□□ -0.56
CR392039.3-201ENST00000623236 UHRF1BP1LA0JNW5 1464 aa11.51□□□□□ -0.57
CR392039.3-201ENST00000623236 CCER1Q8TC90 406 aaPredicted RBP11.51□□□□□ -0.57
CR392039.3-201ENST00000623236 SUPT6HQ7KZ85 1726 aaKnown RBP11.51□□□□□ -0.57
CR392039.3-201ENST00000623236 MIA2Q96PC5 1412 aa11.51□□□□□ -0.57
CR392039.3-201ENST00000623236 ABCC2Q92887 1545 aa11.5□□□□□ -0.57
CR392039.3-201ENST00000623236 ZEB1P37275 1124 aaPredicted RBP11.5□□□□□ -0.57
CR392039.3-201ENST00000623236 PPP6R1Q9UPN7 881 aa11.49□□□□□ -0.57
CR392039.3-201ENST00000623236 TCOF1Q13428 1488 aaKnown RBP11.47□□□□□ -0.57
CR392039.3-201ENST00000623236 CFDP1Q9UEE9 299 aaPredicted RBP11.47□□□□□ -0.57
CR392039.3-201ENST00000623236 KDM5BQ9UGL1 1544 aa11.46□□□□□ -0.57
CR392039.3-201ENST00000623236 GPATCH8Q9UKJ3 1502 aaKnown RBP11.46□□□□□ -0.57
CR392039.3-201ENST00000623236 ZNF644Q9H582 1327 aaPredicted RBP11.46□□□□□ -0.57
CR392039.3-201ENST00000623236 PTPRKQ15262 1439 aa11.45□□□□□ -0.58
CR392039.3-201ENST00000623236 ABCC10Q5T3U5 1492 aa11.44□□□□□ -0.58
CR392039.3-201ENST00000623236 KCNH8Q96L42 1107 aa11.44□□□□□ -0.58
CR392039.3-201ENST00000623236 SETD5Q9C0A6 1442 aa11.43□□□□□ -0.58
CR392039.3-201ENST00000623236 ADRA2BP18089 450 aa11.43□□□□□ -0.58
CR392039.3-201ENST00000623236 ZNF777Q9ULD5 760 aaPredicted RBP11.43□□□□□ -0.58
CR392039.3-201ENST00000623236 PTPN23Q9H3S7 1636 aa11.42□□□□□ -0.58
CR392039.3-201ENST00000623236 KIF14Q15058 1648 aa11.42□□□□□ -0.58
CR392039.3-201ENST00000623236 RAB3GAP2Q9H2M9 1393 aa11.41□□□□□ -0.58
CR392039.3-201ENST00000623236 NPM1P06748 294 aaKnown RBP eCLIP11.41□□□□□ -0.58
CR392039.3-201ENST00000623236 ADCY10Q96PN6 1610 aa11.41□□□□□ -0.58
CR392039.3-201ENST00000623236 CHIC2Q9UKJ5 165 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms