RNA–Protein interactions for RNA: ENST00000623073.3

ERCC6-209, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 11,026 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-209ENST00000623073 MSNP26038 577 aaKnown RBP8.33□□□□□ -1.08
ERCC6-209ENST00000623073 TCERG1O14776 1098 aaKnown RBP8.33□□□□□ -1.08
ERCC6-209ENST00000623073 MIER1Q8N108 512 aa8.32□□□□□ -1.08
ERCC6-209ENST00000623073 MYH16Q9H6N6 1097 aa8.32□□□□□ -1.08
ERCC6-209ENST00000623073 TMC1Q8TDI8 760 aa8.32□□□□□ -1.08
ERCC6-209ENST00000623073 TRIM52Q96A61 297 aa8.31□□□□□ -1.08
ERCC6-209ENST00000623073 MRS2Q9HD23 443 aa8.31□□□□□ -1.08
ERCC6-209ENST00000623073 A0A0U1RQG5 324 aaPredicted RBP8.31□□□□□ -1.08
ERCC6-209ENST00000623073 GOLGA6L3A6NEY3 463 aa8.31□□□□□ -1.08
ERCC6-209ENST00000623073 CALRP27797 417 aaKnown RBP8.31□□□□□ -1.08
ERCC6-209ENST00000623073 ZCCHC6Q5VYS8 1495 aaKnown RBP8.3□□□□□ -1.08
ERCC6-209ENST00000623073 ISY1Q9ULR0 285 aaKnown RBP8.3□□□□□ -1.08
ERCC6-209ENST00000623073 CDCA8Q53HL2 280 aa8.3□□□□□ -1.08
ERCC6-209ENST00000623073 PTMAP06454 111 aaKnown RBP8.3□□□□□ -1.08
ERCC6-209ENST00000623073 EIF4G2P78344 907 aaKnown RBP eCLIP8.3□□□□□ -1.08
ERCC6-209ENST00000623073 RBM19Q9Y4C8 960 aaKnown RBP8.3□□□□□ -1.08
ERCC6-209ENST00000623073 CASC1Q6TDU7 716 aa8.29□□□□□ -1.08
ERCC6-209ENST00000623073 HSP90AA2PQ14568 343 aaPredicted RBP8.29□□□□□ -1.08
ERCC6-209ENST00000623073 CNGB1Q14028 1251 aaPredicted RBP8.28□□□□□ -1.08
ERCC6-209ENST00000623073 GBP4Q96PP9 640 aa8.28□□□□□ -1.08
ERCC6-209ENST00000623073 KIAA2012Q0VF49 1180 aa8.27□□□□□ -1.09
ERCC6-209ENST00000623073 GOLGA3Q08378 1498 aa8.27□□□□□ -1.09
ERCC6-209ENST00000623073 SYAP1Q96A49 352 aaPredicted RBP8.27□□□□□ -1.09
ERCC6-209ENST00000623073 TNIKQ9UKE5 1360 aa8.27□□□□□ -1.09
ERCC6-209ENST00000623073 HAP1P54257 671 aaPredicted RBP8.26□□□□□ -1.09
ERCC6-209ENST00000623073 ZRSR1Q15695 479 aaKnown RBP8.26□□□□□ -1.09
ERCC6-209ENST00000623073 IPO9Q96P70 1041 aaKnown RBP8.26□□□□□ -1.09
ERCC6-209ENST00000623073 DNTTIP2Q5QJE6 756 aaKnown RBP8.26□□□□□ -1.09
ERCC6-209ENST00000623073 CLIP1P30622 1438 aa8.25□□□□□ -1.09
ERCC6-209ENST00000623073 RSF1Q96T23 1441 aaPredicted RBP8.25□□□□□ -1.09
ERCC6-209ENST00000623073 PHLDB1Q86UU1 1377 aa8.25□□□□□ -1.09
ERCC6-209ENST00000623073 DDX10Q13206 875 aaKnown RBP8.25□□□□□ -1.09
ERCC6-209ENST00000623073 WDR43Q15061 677 aaKnown RBP eCLIP8.24□□□□□ -1.09
ERCC6-209ENST00000623073 TAF3Q5VWG9 929 aa8.24□□□□□ -1.09
ERCC6-209ENST00000623073 SKOR2Q2VWA4 1001 aaPredicted RBP8.23□□□□□ -1.09
ERCC6-209ENST00000623073 CSPP1Q1MSJ5 1256 aa8.23□□□□□ -1.09
ERCC6-209ENST00000623073 PDE3BQ13370 1112 aa8.22□□□□□ -1.09
ERCC6-209ENST00000623073 TNNT3P45378 269 aaPredicted RBP8.22□□□□□ -1.09
ERCC6-209ENST00000623073 AAMPQ13685 434 aa8.22□□□□□ -1.09
ERCC6-209ENST00000623073 CEP164Q9UPV0 1460 aa8.21□□□□□ -1.1
ERCC6-209ENST00000623073 NGEFQ8N5V2 710 aa8.21□□□□□ -1.1
ERCC6-209ENST00000623073 DDX11L8A8MPP1 907 aa8.21□□□□□ -1.1
ERCC6-209ENST00000623073 PHF14O94880 888 aa8.2□□□□□ -1.1
ERCC6-209ENST00000623073 HSCBQ8IWL3 235 aa8.2□□□□□ -1.1
ERCC6-209ENST00000623073 TSHZ2Q9NRE2 1034 aa8.19□□□□□ -1.1
ERCC6-209ENST00000623073 ROCK2O75116 1388 aaKnown RBP8.19□□□□□ -1.1
ERCC6-209ENST00000623073 GOLGA6L1Q8N7Z2 621 aa8.19□□□□□ -1.1
ERCC6-209ENST00000623073 FAM9BQ8IZU0 186 aa8.18□□□□□ -1.1
ERCC6-209ENST00000623073 CEP162Q5TB80 1403 aa8.18□□□□□ -1.1
ERCC6-209ENST00000623073 HTATSF1O43719 755 aaKnown RBP8.18□□□□□ -1.1
ERCC6-209ENST00000623073 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.18□□□□□ -1.1
ERCC6-209ENST00000623073 TPM2P07951 284 aa8.17□□□□□ -1.1
ERCC6-209ENST00000623073 GSE1Q14687 1217 aa8.17□□□□□ -1.1
ERCC6-209ENST00000623073 RRP9O43818 475 aaKnown RBP8.16□□□□□ -1.1
ERCC6-209ENST00000623073 SETQ01105 290 aaPredicted RBP8.16□□□□□ -1.1
ERCC6-209ENST00000623073 CCDC66A2RUB6 948 aa8.15□□□□□ -1.1
ERCC6-209ENST00000623073 TSPYL1Q9H0U9 437 aa8.15□□□□□ -1.1
ERCC6-209ENST00000623073 DHX8Q14562 1220 aaKnown RBP8.15□□□□□ -1.1
ERCC6-209ENST00000623073 CHMP4CQ96CF2 233 aa8.15□□□□□ -1.1
ERCC6-209ENST00000623073 CHMP4AQ9BY43 222 aa8.15□□□□□ -1.1
ERCC6-209ENST00000623073 FHAD1B1AJZ9 1412 aa8.14□□□□□ -1.11
ERCC6-209ENST00000623073 GPS2Q13227 327 aa8.14□□□□□ -1.11
ERCC6-209ENST00000623073 CFAP53Q96M91 514 aa8.14□□□□□ -1.11
ERCC6-209ENST00000623073 HMGN5P82970 282 aaKnown RBP8.14□□□□□ -1.11
ERCC6-209ENST00000623073 SLC4A1APQ9BWU0 796 aaKnown RBP8.14□□□□□ -1.11
ERCC6-209ENST00000623073 MAPK8IP3Q9UPT6 1336 aa8.13□□□□□ -1.11
ERCC6-209ENST00000623073 WRNQ14191 1432 aaPredicted RBP eCLIP8.13□□□□□ -1.11
ERCC6-209ENST00000623073 CCDC34Q96HJ3 373 aa8.13□□□□□ -1.11
ERCC6-209ENST00000623073 NOM1Q5C9Z4 860 aaKnown RBP8.13□□□□□ -1.11
ERCC6-209ENST00000623073 MCCP23508 829 aa8.13□□□□□ -1.11
ERCC6-209ENST00000623073 PKNOX2Q96KN3 472 aa8.13□□□□□ -1.11
ERCC6-209ENST00000623073 TPM3P06753 285 aa8.12□□□□□ -1.11
ERCC6-209ENST00000623073 FAM43AQ8N2R8 423 aa8.11□□□□□ -1.11
ERCC6-209ENST00000623073 RALBP1Q15311 655 aa8.1□□□□□ -1.11
ERCC6-209ENST00000623073 CCNB3Q8WWL7 1395 aa8.1□□□□□ -1.11
ERCC6-209ENST00000623073 HSP90AB1P08238 724 aaKnown RBP8.1□□□□□ -1.11
ERCC6-209ENST00000623073 TEX35Q5T0J7 233 aa8.1□□□□□ -1.11
ERCC6-209ENST00000623073 CAVIN1Q6NZI2 390 aaKnown RBP8.09□□□□□ -1.11
ERCC6-209ENST00000623073 VSIG10Q8N0Z9 540 aa8.09□□□□□ -1.11
ERCC6-209ENST00000623073 ATP6V1DQ9Y5K8 247 aa8.09□□□□□ -1.11
ERCC6-209ENST00000623073 MTUS2Q5JR59 1369 aa8.09□□□□□ -1.11
ERCC6-209ENST00000623073 CWC15Q9P013 229 aaKnown RBP8.09□□□□□ -1.12
ERCC6-209ENST00000623073 KTN1Q86UP2 1357 aaKnown RBP8.08□□□□□ -1.12
ERCC6-209ENST00000623073 EIF3AQ14152 1382 aaKnown RBP8.08□□□□□ -1.12
ERCC6-209ENST00000623073 GOLGA6L4A6NEF3 574 aa8.08□□□□□ -1.12
ERCC6-209ENST00000623073 VPS8Q8N3P4 1428 aa8.08□□□□□ -1.12
ERCC6-209ENST00000623073 IL27Q8NEV9 243 aa8.07□□□□□ -1.12
ERCC6-209ENST00000623073 FTSJ3Q8IY81 847 aaKnown RBP8.07□□□□□ -1.12
ERCC6-209ENST00000623073 TPM4P67936 248 aa8.07□□□□□ -1.12
ERCC6-209ENST00000623073 PDCL2Q8N4E4 241 aa8.06□□□□□ -1.12
ERCC6-209ENST00000623073 RWDD1Q9H446 243 aaPredicted RBP8.06□□□□□ -1.12
ERCC6-209ENST00000623073 ZBED9Q6R2W3 1325 aa8.06□□□□□ -1.12
ERCC6-209ENST00000623073 RB1CC1Q8TDY2 1594 aa8.06□□□□□ -1.12
ERCC6-209ENST00000623073 HDAC5Q9UQL6 1122 aa8.06□□□□□ -1.12
ERCC6-209ENST00000623073 IPO8O15397 1037 aaKnown RBP8.06□□□□□ -1.12
ERCC6-209ENST00000623073 PRKCSHP14314 528 aaPredicted RBP8.06□□□□□ -1.12
ERCC6-209ENST00000623073 PMFBP1Q8TBY8 1022 aa8.06□□□□□ -1.12
ERCC6-209ENST00000623073 KNSTRNQ9Y448 316 aa8.05□□□□□ -1.12
ERCC6-209ENST00000623073 MRE11P49959 708 aa8.05□□□□□ -1.12
ERCC6-209ENST00000623073 DIAPH3Q9NSV4 1193 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms