RNA–Protein interactions for RNA: ENST00000623073.3

ERCC6-209, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 11,026 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-209ENST00000623073 MYT1Q01538 1121 aa10.97□□□□□ -0.65
ERCC6-209ENST00000623073 PELP1Q8IZL8 1130 aaKnown RBP10.85□□□□□ -0.67
ERCC6-209ENST00000623073 TTBK1Q5TCY1 1321 aaPredicted RBP10.19□□□□□ -0.78
ERCC6-209ENST00000623073 ZEB1P37275 1124 aaPredicted RBP10.18□□□□□ -0.78
ERCC6-209ENST00000623073 CENPBP07199 599 aaPredicted RBP10.11□□□□□ -0.79
ERCC6-209ENST00000623073 CCER1Q8TC90 406 aaPredicted RBP10.11□□□□□ -0.79
ERCC6-209ENST00000623073 YTHDC1Q96MU7 727 aaKnown RBP9.9□□□□□ -0.82
ERCC6-209ENST00000623073 NISCHQ9Y2I1 1504 aa9.89□□□□□ -0.83
ERCC6-209ENST00000623073 ERICH6Q7L0X2 663 aa9.78□□□□□ -0.84
ERCC6-209ENST00000623073 NEFLP07196 543 aa9.65□□□□□ -0.86
ERCC6-209ENST00000623073 CLSPNQ9HAW4 1339 aa9.62□□□□□ -0.87
ERCC6-209ENST00000623073 APLP2Q06481 763 aa9.6□□□□□ -0.87
ERCC6-209ENST00000623073 HRCP23327 699 aa9.59□□□□□ -0.87
ERCC6-209ENST00000623073 MYT1LQ9UL68 1186 aa9.58□□□□□ -0.88
ERCC6-209ENST00000623073 SUPT5HO00267 1087 aaKnown RBP9.57□□□□□ -0.88
ERCC6-209ENST00000623073 PCGF6Q9BYE7 350 aa9.51□□□□□ -0.89
ERCC6-209ENST00000623073 TRIM26Q12899 539 aaPredicted RBP9.44□□□□□ -0.9
ERCC6-209ENST00000623073 DCAF8L2P0C7V8 631 aa9.42□□□□□ -0.9
ERCC6-209ENST00000623073 FAM9AQ8IZU1 332 aaPredicted RBP9.37□□□□□ -0.91
ERCC6-209ENST00000623073 RTL5Q5HYW3 569 aaPredicted RBP9.36□□□□□ -0.91
ERCC6-209ENST00000623073 DAXXQ9UER7 740 aaPredicted RBP9.32□□□□□ -0.92
ERCC6-209ENST00000623073 GLIPR1L2Q4G1C9 344 aa9.31□□□□□ -0.92
ERCC6-209ENST00000623073 TRIM41Q8WV44 630 aa9.15□□□□□ -0.94
ERCC6-209ENST00000623073 DIEXFQ68CQ4 756 aaKnown RBP9.1□□□□□ -0.95
ERCC6-209ENST00000623073 ACIN1Q9UKV3 1341 aaKnown RBP9.09□□□□□ -0.95
ERCC6-209ENST00000623073 SHROOM4Q9ULL8 1493 aa9.08□□□□□ -0.96
ERCC6-209ENST00000623073 ZNF316A6NFI3 1004 aaPredicted RBP9.05□□□□□ -0.96
ERCC6-209ENST00000623073 CDK11AQ9UQ88 783 aaPredicted RBP9.04□□□□□ -0.96
ERCC6-209ENST00000623073 DCAF1Q9Y4B6 1507 aa9.02□□□□□ -0.97
ERCC6-209ENST00000623073 GTF3C3Q9Y5Q9 886 aa8.99□□□□□ -0.97
ERCC6-209ENST00000623073 ANP32AP39687 249 aaKnown RBP8.97□□□□□ -0.97
ERCC6-209ENST00000623073 ANP32EQ9BTT0 268 aa8.96□□□□□ -0.98
ERCC6-209ENST00000623073 CHIC1Q5VXU3 224 aa8.94□□□□□ -0.98
ERCC6-209ENST00000623073 UBTFP17480 764 aaKnown RBP8.91□□□□□ -0.98
ERCC6-209ENST00000623073 ANP32BQ92688 251 aaKnown RBP8.9□□□□□ -0.98
ERCC6-209ENST00000623073 NCLP19338 710 aaKnown RBP8.88□□□□□ -0.99
ERCC6-209ENST00000623073 ANP32CO43423 234 aa8.83□□□□□ -1
ERCC6-209ENST00000623073 TNNT2P45379 298 aaPredicted RBP8.81□□□□□ -1
ERCC6-209ENST00000623073 ERICH6BQ5W0A0 696 aa8.81□□□□□ -1
ERCC6-209ENST00000623073 ARID4BQ4LE39 1312 aaPredicted RBP8.81□□□□□ -1
ERCC6-209ENST00000623073 EIF5BO60841 1220 aaKnown RBP8.8□□□□□ -1
ERCC6-209ENST00000623073 TRIM44Q96DX7 344 aaPredicted RBP8.79□□□□□ -1
ERCC6-209ENST00000623073 RANGAP1P46060 587 aaPredicted RBP8.75□□□□□ -1.01
ERCC6-209ENST00000623073 CCDC180Q9P1Z9 1646 aa8.75□□□□□ -1.01
ERCC6-209ENST00000623073 UPF2Q9HAU5 1272 aaKnown RBP8.74□□□□□ -1.01
ERCC6-209ENST00000623073 NEUROD1Q13562 356 aa8.73□□□□□ -1.01
ERCC6-209ENST00000623073 PPM1GO15355 546 aaPredicted RBP8.72□□□□□ -1.01
ERCC6-209ENST00000623073 DDRGK1Q96HY6 314 aa8.72□□□□□ -1.01
ERCC6-209ENST00000623073 PPARGC1BQ86YN6 1023 aaKnown RBP8.7□□□□□ -1.02
ERCC6-209ENST00000623073 ZBTB47Q9UFB7 747 aaPredicted RBP8.7□□□□□ -1.02
ERCC6-209ENST00000623073 NEFMP07197 916 aa8.68□□□□□ -1.02
ERCC6-209ENST00000623073 EHMT2Q96KQ7 1210 aa8.67□□□□□ -1.02
ERCC6-209ENST00000623073 SCAF1Q9H7N4 1312 aaKnown RBP8.64□□□□□ -1.03
ERCC6-209ENST00000623073 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.64□□□□□ -1.03
ERCC6-209ENST00000623073 BECN1Q14457 450 aa8.62□□□□□ -1.03
ERCC6-209ENST00000623073 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.61□□□□□ -1.03
ERCC6-209ENST00000623073 BCL11AQ9H165 835 aa8.61□□□□□ -1.03
ERCC6-209ENST00000623073 EEA1Q15075 1411 aa8.59□□□□□ -1.03
ERCC6-209ENST00000623073 HNRNPUL2Q1KMD3 747 aaKnown RBP8.58□□□□□ -1.04
ERCC6-209ENST00000623073 GOLGA6L22H0YM25 854 aa8.57□□□□□ -1.04
ERCC6-209ENST00000623073 USP35Q9P2H5 1018 aa8.57□□□□□ -1.04
ERCC6-209ENST00000623073 PTMSP20962 102 aa8.56□□□□□ -1.04
ERCC6-209ENST00000623073 L1TD1Q5T7N2 865 aaKnown RBP8.56□□□□□ -1.04
ERCC6-209ENST00000623073 TIMELESSQ9UNS1 1208 aa8.56□□□□□ -1.04
ERCC6-209ENST00000623073 FKBP8Q14318 412 aa8.55□□□□□ -1.04
ERCC6-209ENST00000623073 CDK11BP21127 795 aaKnown RBP8.53□□□□□ -1.04
ERCC6-209ENST00000623073 CCDC136Q96JN2 1154 aa8.53□□□□□ -1.04
ERCC6-209ENST00000623073 LOC105371045A0A1W2PR82 267 aa8.53□□□□□ -1.04
ERCC6-209ENST00000623073 HSP90AA1P07900 732 aaKnown RBP8.52□□□□□ -1.05
ERCC6-209ENST00000623073 RSPH6AQ9H0K4 717 aa8.51□□□□□ -1.05
ERCC6-209ENST00000623073 ZNF326Q5BKZ1 582 aaKnown RBP8.51□□□□□ -1.05
ERCC6-209ENST00000623073 BCANQ96GW7 911 aa8.5□□□□□ -1.05
ERCC6-209ENST00000623073 CFAP44Q96MT7 982 aa8.5□□□□□ -1.05
ERCC6-209ENST00000623073 TONSLQ96HA7 1378 aa8.49□□□□□ -1.05
ERCC6-209ENST00000623073 CANXP27824 592 aaKnown RBP8.48□□□□□ -1.05
ERCC6-209ENST00000623073 NOP58Q9Y2X3 529 aaKnown RBP8.48□□□□□ -1.05
ERCC6-209ENST00000623073 ATP1B4Q9UN42 357 aaPredicted RBP8.48□□□□□ -1.05
ERCC6-209ENST00000623073 PPP4R2Q9NY27 417 aa8.47□□□□□ -1.05
ERCC6-209ENST00000623073 NRDCO43847 1150 aa8.45□□□□□ -1.06
ERCC6-209ENST00000623073 CHMP4BQ9H444 224 aaKnown RBP8.45□□□□□ -1.06
ERCC6-209ENST00000623073 CCER2I3L3R5 266 aa8.44□□□□□ -1.06
ERCC6-209ENST00000623073 HNRNPUQ00839 825 aaKnown RBP eCLIP8.44□□□□□ -1.06
ERCC6-209ENST00000623073 CHAF1AQ13111 956 aaPredicted RBP8.43□□□□□ -1.06
ERCC6-209ENST00000623073 MTERF4Q7Z6M4 381 aaKnown RBP8.41□□□□□ -1.06
ERCC6-209ENST00000623073 LAS1LQ9Y4W2 734 aaKnown RBP8.41□□□□□ -1.06
ERCC6-209ENST00000623073 SLC24A1O60721 1099 aa8.41□□□□□ -1.06
ERCC6-209ENST00000623073 CSRNP3Q8WYN3 585 aa8.4□□□□□ -1.06
ERCC6-209ENST00000623073 MS4A1P11836 297 aa8.38□□□□□ -1.07
ERCC6-209ENST00000623073 MAP7D2Q96T17 732 aa8.38□□□□□ -1.07
ERCC6-209ENST00000623073 PNNQ9H307 717 aaKnown RBP8.38□□□□□ -1.07
ERCC6-209ENST00000623073 GOLGA6L6A8MZA4 724 aa8.38□□□□□ -1.07
ERCC6-209ENST00000623073 POLR3GLQ9BT43 218 aa8.38□□□□□ -1.07
ERCC6-209ENST00000623073 ITGAEP38570 1179 aa8.37□□□□□ -1.07
ERCC6-209ENST00000623073 FANCIQ9NVI1 1328 aa8.37□□□□□ -1.07
ERCC6-209ENST00000623073 NBR1Q14596 966 aa8.36□□□□□ -1.07
ERCC6-209ENST00000623073 DEKP35659 375 aaKnown RBP8.36□□□□□ -1.07
ERCC6-209ENST00000623073 NAP1L5Q96NT1 182 aaPredicted RBP8.36□□□□□ -1.07
ERCC6-209ENST00000623073 NPM2Q86SE8 214 aaKnown RBP8.36□□□□□ -1.07
ERCC6-209ENST00000623073 SUPT16HQ9Y5B9 1047 aaKnown RBP8.35□□□□□ -1.07
ERCC6-209ENST00000623073 FAM50AQ14320 339 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms