RNA–Protein interactions for RNA: ENST00000622960.1

ATRX-208, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 628 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-208ENST00000622960 PRG4Q92954 1404 aaPredicted RBP22.35■■□□□ 1.17
ATRX-208ENST00000622960 JPH4Q96JJ6 628 aa22.32■■□□□ 1.16
ATRX-208ENST00000622960 CARMIL1Q5VZK9 1371 aa22.31■■□□□ 1.16
ATRX-208ENST00000622960 KIAA0586Q9BVV6 1533 aa22.31■■□□□ 1.16
ATRX-208ENST00000622960 IQGAP2Q13576 1575 aa22.18■■□□□ 1.14
ATRX-208ENST00000622960 RAPGEF2Q9Y4G8 1499 aa22.18■■□□□ 1.14
ATRX-208ENST00000622960 CARMIL2Q6F5E8 1435 aa22.16■■□□□ 1.14
ATRX-208ENST00000622960 NPM1P06748 294 aaKnown RBP eCLIP22.14■■□□□ 1.13
ATRX-208ENST00000622960 PTPRGP23470 1445 aa22.06■■□□□ 1.12
ATRX-208ENST00000622960 ADCY10Q96PN6 1610 aa22.05■■□□□ 1.12
ATRX-208ENST00000622960 TNIKQ9UKE5 1360 aa22.04■■□□□ 1.12
ATRX-208ENST00000622960 CTTNBP2Q8WZ74 1663 aa22.04■■□□□ 1.12
ATRX-208ENST00000622960 TTBK1Q5TCY1 1321 aaPredicted RBP22.03■■□□□ 1.12
ATRX-208ENST00000622960 MAPKBP1O60336 1514 aa22.01■■□□□ 1.11
ATRX-208ENST00000622960 UGGT2Q9NYU1 1516 aa22■■□□□ 1.11
ATRX-208ENST00000622960 KIF13AQ9H1H9 1805 aa21.96■■□□□ 1.11
ATRX-208ENST00000622960 PRXQ9BXM0 1461 aa21.96■■□□□ 1.11
ATRX-208ENST00000622960 DISP1Q96F81 1524 aa21.96■■□□□ 1.11
ATRX-208ENST00000622960 KIAA0556O60303 1618 aa21.95■■□□□ 1.1
ATRX-208ENST00000622960 GOLGA3Q08378 1498 aa21.93■■□□□ 1.1
ATRX-208ENST00000622960 EEA1Q15075 1411 aa21.93■■□□□ 1.1
ATRX-208ENST00000622960 ABCC10Q5T3U5 1492 aa21.92■■□□□ 1.1
ATRX-208ENST00000622960 ABCC2Q92887 1545 aa21.9■■□□□ 1.1
ATRX-208ENST00000622960 DIP2BQ9P265 1576 aa21.9■■□□□ 1.1
ATRX-208ENST00000622960 UACAQ9BZF9 1416 aa21.89■■□□□ 1.1
ATRX-208ENST00000622960 FAM69CQ0P6D2 419 aa21.89■■□□□ 1.09
ATRX-208ENST00000622960 UHRF1BP1LA0JNW5 1464 aa21.89■■□□□ 1.09
ATRX-208ENST00000622960 FAM9AQ8IZU1 332 aaPredicted RBP21.87■■□□□ 1.09
ATRX-208ENST00000622960 CSRNP3Q8WYN3 585 aa21.87■■□□□ 1.09
ATRX-208ENST00000622960 PLB1Q6P1J6 1458 aa21.82■■□□□ 1.08
ATRX-208ENST00000622960 ASXL2Q76L83 1435 aa21.79■■□□□ 1.08
ATRX-208ENST00000622960 KDM5BQ9UGL1 1544 aa21.77■■□□□ 1.08
ATRX-208ENST00000622960 ZCCHC11Q5TAX3 1644 aaKnown RBP21.76■■□□□ 1.07
ATRX-208ENST00000622960 TSPOAP1O95153 1857 aa21.73■■□□□ 1.07
ATRX-208ENST00000622960 GLI2P10070 1586 aa21.7■■□□□ 1.06
ATRX-208ENST00000622960 KIF21BO75037 1637 aa21.7■■□□□ 1.06
ATRX-208ENST00000622960 KDM6BO15054 1643 aa21.69■■□□□ 1.06
ATRX-208ENST00000622960 ABCA8O94911 1581 aa21.69■■□□□ 1.06
ATRX-208ENST00000622960 SAMD9Q5K651 1589 aa21.67■■□□□ 1.06
ATRX-208ENST00000622960 WDR7Q9Y4E6 1490 aa21.65■■□□□ 1.06
ATRX-208ENST00000622960 CHIC1Q5VXU3 224 aa21.65■■□□□ 1.06
ATRX-208ENST00000622960 EPRSP07814 1512 aaKnown RBP21.65■■□□□ 1.06
ATRX-208ENST00000622960 P3H3Q8IVL6 736 aa21.64■■□□□ 1.05
ATRX-208ENST00000622960 AEBP2Q6ZN18 517 aaPredicted RBP21.62■■□□□ 1.05
ATRX-208ENST00000622960 TEX14Q8IWB6 1497 aa21.61■■□□□ 1.05
ATRX-208ENST00000622960 MAP3K4Q9Y6R4 1608 aa21.6■■□□□ 1.05
ATRX-208ENST00000622960 RANGAP1P46060 587 aaPredicted RBP21.6■■□□□ 1.05
ATRX-208ENST00000622960 EFCAB5A4FU69 1503 aa21.59■■□□□ 1.05
ATRX-208ENST00000622960 RAPGEF6Q8TEU7 1601 aa21.57■■□□□ 1.04
ATRX-208ENST00000622960 PPRC1Q5VV67 1664 aaKnown RBP21.55■■□□□ 1.04
ATRX-208ENST00000622960 UBTFP17480 764 aaKnown RBP21.54■■□□□ 1.04
ATRX-208ENST00000622960 CFAP43Q8NDM7 1665 aa21.53■■□□□ 1.04
ATRX-208ENST00000622960 FHOD3Q2V2M9 1422 aa21.52■■□□□ 1.04
ATRX-208ENST00000622960 ARID3CA6NKF2 412 aa21.51■■□□□ 1.03
ATRX-208ENST00000622960 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.51■■□□□ 1.03
ATRX-208ENST00000622960 HNRNPUL2Q1KMD3 747 aaKnown RBP21.51■■□□□ 1.03
ATRX-208ENST00000622960 KCNH8Q96L42 1107 aa21.51■■□□□ 1.03
ATRX-208ENST00000622960 EHMT2Q96KQ7 1210 aa21.49■■□□□ 1.03
ATRX-208ENST00000622960 ATP10BO94823 1461 aa21.48■■□□□ 1.03
ATRX-208ENST00000622960 CD109Q6YHK3 1445 aa21.47■■□□□ 1.03
ATRX-208ENST00000622960 MAGI3Q5TCQ9 1506 aa21.44■■□□□ 1.02
ATRX-208ENST00000622960 NUP153P49790 1475 aaKnown RBP21.42■■□□□ 1.02
ATRX-208ENST00000622960 FMN1Q68DA7 1419 aa21.38■■□□□ 1.01
ATRX-208ENST00000622960 ABCA9Q8IUA7 1624 aa21.38■■□□□ 1.01
ATRX-208ENST00000622960 PLEKHD1A6NEE1 506 aa21.35■■□□□ 1.01
ATRX-208ENST00000622960 HECW1Q76N89 1606 aa21.35■■□□□ 1.01
ATRX-208ENST00000622960 ARHGAP35Q9NRY4 1499 aa21.32■■□□□ 1
ATRX-208ENST00000622960 COL17A1Q9UMD9 1497 aaPredicted RBP21.32■■□□□ 1
ATRX-208ENST00000622960 ATP1B4Q9UN42 357 aaPredicted RBP21.31■■□□□ 1
ATRX-208ENST00000622960 PHLDB1Q86UU1 1377 aa21.3■■□□□ 1
ATRX-208ENST00000622960 NEO1Q92859 1461 aa21.26■□□□□ 0.99
ATRX-208ENST00000622960 CDK13Q14004 1512 aaKnown RBP21.26■□□□□ 0.99
ATRX-208ENST00000622960 ARAP3Q8WWN8 1544 aa21.25■□□□□ 0.99
ATRX-208ENST00000622960 CFAP74Q9C0B2 1584 aa21.25■□□□□ 0.99
ATRX-208ENST00000622960 CDK11AQ9UQ88 783 aaPredicted RBP21.25■□□□□ 0.99
ATRX-208ENST00000622960 ADGRL1O94910 1474 aa21.2■□□□□ 0.98
ATRX-208ENST00000622960 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.19■□□□□ 0.98
ATRX-208ENST00000622960 KDM4FA0A1W2PPD8 638 aa21.18■□□□□ 0.98
ATRX-208ENST00000622960 CLIP1P30622 1438 aa21.18■□□□□ 0.98
ATRX-208ENST00000622960 TTC37Q6PGP7 1564 aa21.18■□□□□ 0.98
ATRX-208ENST00000622960 FANCAO15360 1455 aa21.17■□□□□ 0.98
ATRX-208ENST00000622960 KIF14Q15058 1648 aa21.16■□□□□ 0.98
ATRX-208ENST00000622960 CCDC18Q5T9S5 1454 aa21.15■□□□□ 0.98
ATRX-208ENST00000622960 PCF11O94913 1555 aaKnown RBP21.14■□□□□ 0.97
ATRX-208ENST00000622960 CASKIN1Q8WXD9 1431 aa21.12■□□□□ 0.97
ATRX-208ENST00000622960 MYO5CQ9NQX4 1742 aa21.12■□□□□ 0.97
ATRX-208ENST00000622960 DENND4BO75064 1496 aaPredicted RBP21.11■□□□□ 0.97
ATRX-208ENST00000622960 AKNAQ7Z591 1439 aa21.11■□□□□ 0.97
ATRX-208ENST00000622960 FYCO1Q9BQS8 1478 aa21.1■□□□□ 0.97
ATRX-208ENST00000622960 TROQ12816 1431 aaPredicted RBP21.1■□□□□ 0.97
ATRX-208ENST00000622960 RAPGEF3O95398 923 aa21.09■□□□□ 0.97
ATRX-208ENST00000622960 LRRIQ1Q96JM4 1722 aa21.07■□□□□ 0.96
ATRX-208ENST00000622960 FRMPD1Q5SYB0 1578 aa21.07■□□□□ 0.96
ATRX-208ENST00000622960 PLCH2O75038 1416 aa21.07■□□□□ 0.96
ATRX-208ENST00000622960 RICTORQ6R327 1708 aa21.05■□□□□ 0.96
ATRX-208ENST00000622960 ARHGAP5Q13017 1502 aa21.03■□□□□ 0.96
ATRX-208ENST00000622960 ARHGEF40Q8TER5 1519 aa21.03■□□□□ 0.96
ATRX-208ENST00000622960 EFCAB2Q5VUJ9 269 aa21.02■□□□□ 0.96
ATRX-208ENST00000622960 ZMYM4Q5VZL5 1548 aa21■□□□□ 0.95
ATRX-208ENST00000622960 ARID4BQ4LE39 1312 aaPredicted RBP21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 143.9 ms