RNA–Protein interactions for RNA: ENST00000622669.4

MFSD1-219, Transcript of major facilitator superfamily domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene MFSD1, Length 2,361 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MFSD1-219ENST00000622669 CUL7Q14999 1698 aa28.9■■■□□ 2.22
MFSD1-219ENST00000622669 LRRC9Q6ZRR7 1453 aa28.9■■■□□ 2.22
MFSD1-219ENST00000622669 ITGAEP38570 1179 aa28.88■■■□□ 2.21
MFSD1-219ENST00000622669 FHAD1B1AJZ9 1412 aa28.87■■■□□ 2.21
MFSD1-219ENST00000622669 FHOD3Q2V2M9 1422 aa28.87■■■□□ 2.21
MFSD1-219ENST00000622669 CLSPNQ9HAW4 1339 aa28.87■■■□□ 2.21
MFSD1-219ENST00000622669 NEUROD1Q13562 356 aa28.86■■■□□ 2.21
MFSD1-219ENST00000622669 CFAP43Q8NDM7 1665 aa28.84■■■□□ 2.21
MFSD1-219ENST00000622669 ACIN1Q9UKV3 1341 aaKnown RBP28.84■■■□□ 2.21
MFSD1-219ENST00000622669 CTTNBP2Q8WZ74 1663 aa28.83■■■□□ 2.21
MFSD1-219ENST00000622669 PHLDB1Q86UU1 1377 aa28.82■■■□□ 2.2
MFSD1-219ENST00000622669 TDRD9Q8NDG6 1382 aaKnown RBP28.8■■■□□ 2.2
MFSD1-219ENST00000622669 ABCA5Q8WWZ7 1642 aa28.79■■■□□ 2.2
MFSD1-219ENST00000622669 EFCAB5A4FU69 1503 aa28.78■■■□□ 2.2
MFSD1-219ENST00000622669 KIF21AQ7Z4S6 1674 aa28.77■■■□□ 2.2
MFSD1-219ENST00000622669 ATP1B4Q9UN42 357 aaPredicted RBP28.76■■■□□ 2.2
MFSD1-219ENST00000622669 PDS5BQ9NTI5 1447 aa28.76■■■□□ 2.19
MFSD1-219ENST00000622669 FYCO1Q9BQS8 1478 aa28.72■■■□□ 2.19
MFSD1-219ENST00000622669 RAB3GAP2Q9H2M9 1393 aa28.71■■■□□ 2.19
MFSD1-219ENST00000622669 GAPVD1Q14C86 1478 aa28.71■■■□□ 2.19
MFSD1-219ENST00000622669 CASKIN1Q8WXD9 1431 aa28.7■■■□□ 2.18
MFSD1-219ENST00000622669 MIER1Q8N108 512 aa28.7■■■□□ 2.18
MFSD1-219ENST00000622669 AQRO60306 1485 aaKnown RBP eCLIP28.66■■■□□ 2.18
MFSD1-219ENST00000622669 CENPBP07199 599 aaPredicted RBP28.66■■■□□ 2.18
MFSD1-219ENST00000622669 FAM50AQ14320 339 aaKnown RBP28.64■■■□□ 2.17
MFSD1-219ENST00000622669 SNAPC4Q5SXM2 1469 aa28.61■■■□□ 2.17
MFSD1-219ENST00000622669 TARBP1Q13395 1621 aaKnown RBP28.6■■■□□ 2.17
MFSD1-219ENST00000622669 MAPKBP1O60336 1514 aa28.6■■■□□ 2.17
MFSD1-219ENST00000622669 SAMD9Q5K651 1589 aa28.59■■■□□ 2.17
MFSD1-219ENST00000622669 FMN1Q68DA7 1419 aa28.59■■■□□ 2.17
MFSD1-219ENST00000622669 SETD5Q9C0A6 1442 aa28.59■■■□□ 2.17
MFSD1-219ENST00000622669 YTHDC1Q96MU7 727 aaKnown RBP28.54■■■□□ 2.16
MFSD1-219ENST00000622669 LRRIQ1Q96JM4 1722 aa28.53■■■□□ 2.16
MFSD1-219ENST00000622669 GTF3C3Q9Y5Q9 886 aa28.5■■■□□ 2.15
MFSD1-219ENST00000622669 PBRM1Q86U86 1689 aa28.45■■■□□ 2.14
MFSD1-219ENST00000622669 GRIN2BQ13224 1484 aa28.44■■■□□ 2.14
MFSD1-219ENST00000622669 FGD6Q6ZV73 1430 aa28.43■■■□□ 2.14
MFSD1-219ENST00000622669 MTUS2Q5JR59 1369 aa28.41■■■□□ 2.14
MFSD1-219ENST00000622669 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.41■■■□□ 2.14
MFSD1-219ENST00000622669 MRC2Q9UBG0 1479 aa28.37■■■□□ 2.13
MFSD1-219ENST00000622669 SIN3AQ96ST3 1273 aa28.35■■■□□ 2.13
MFSD1-219ENST00000622669 ADAMTS12P58397 1594 aa28.34■■■□□ 2.13
MFSD1-219ENST00000622669 THOC2Q8NI27 1593 aaKnown RBP28.34■■■□□ 2.13
MFSD1-219ENST00000622669 NCOA2Q15596 1464 aa28.33■■■□□ 2.13
MFSD1-219ENST00000622669 PTPRKQ15262 1439 aa28.31■■■□□ 2.12
MFSD1-219ENST00000622669 MAGI3Q5TCQ9 1506 aa28.29■■■□□ 2.12
MFSD1-219ENST00000622669 IQGAP2Q13576 1575 aa28.28■■■□□ 2.12
MFSD1-219ENST00000622669 SUPT6HQ7KZ85 1726 aaKnown RBP28.26■■■□□ 2.12
MFSD1-219ENST00000622669 EHBP1L1Q8N3D4 1523 aa28.26■■■□□ 2.12
MFSD1-219ENST00000622669 MYOM3Q5VTT5 1437 aa28.26■■■□□ 2.11
MFSD1-219ENST00000622669 ZNF608Q9ULD9 1512 aaPredicted RBP28.25■■■□□ 2.11
MFSD1-219ENST00000622669 UGGT2Q9NYU1 1516 aa28.2■■■□□ 2.11
MFSD1-219ENST00000622669 ARHGEF11O15085 1522 aa28.2■■■□□ 2.1
MFSD1-219ENST00000622669 CCDC18Q5T9S5 1454 aa28.2■■■□□ 2.1
MFSD1-219ENST00000622669 HFM1A2PYH4 1435 aa28.19■■■□□ 2.1
MFSD1-219ENST00000622669 PTPN23Q9H3S7 1636 aa28.18■■■□□ 2.1
MFSD1-219ENST00000622669 HECW1Q76N89 1606 aa28.18■■■□□ 2.1
MFSD1-219ENST00000622669 WDR62O43379 1518 aa28.16■■■□□ 2.1
MFSD1-219ENST00000622669 IFT140Q96RY7 1462 aa28.16■■■□□ 2.1
MFSD1-219ENST00000622669 EPRSP07814 1512 aaKnown RBP28.14■■■□□ 2.09
MFSD1-219ENST00000622669 CDK13Q14004 1512 aaKnown RBP28.13■■■□□ 2.09
MFSD1-219ENST00000622669 NAIPQ13075 1403 aa28.13■■■□□ 2.09
MFSD1-219ENST00000622669 ARID3CA6NKF2 412 aa28.09■■■□□ 2.09
MFSD1-219ENST00000622669 UACAQ9BZF9 1416 aa28.09■■■□□ 2.09
MFSD1-219ENST00000622669 TIMELESSQ9UNS1 1208 aa28.07■■■□□ 2.08
MFSD1-219ENST00000622669 EIF4G3O43432 1585 aaKnown RBP28.04■■■□□ 2.08
MFSD1-219ENST00000622669 PPP1R15AO75807 674 aaPredicted RBP28.03■■■□□ 2.08
MFSD1-219ENST00000622669 TCOF1Q13428 1488 aaKnown RBP28.03■■■□□ 2.08
MFSD1-219ENST00000622669 DISP1Q96F81 1524 aa28.01■■■□□ 2.07
MFSD1-219ENST00000622669 KIAA0586Q9BVV6 1533 aa28■■■□□ 2.07
MFSD1-219ENST00000622669 KIAA0556O60303 1618 aa27.99■■■□□ 2.07
MFSD1-219ENST00000622669 RRP7BPQ9NSQ0 103 aa27.98■■■□□ 2.07
MFSD1-219ENST00000622669 CHIC2Q9UKJ5 165 aa27.98■■■□□ 2.07
MFSD1-219ENST00000622669 GRIN2AQ12879 1464 aa27.97■■■□□ 2.07
MFSD1-219ENST00000622669 HIRIP3Q9BW71 556 aaPredicted RBP27.95■■■□□ 2.07
MFSD1-219ENST00000622669 TONSLQ96HA7 1378 aa27.94■■■□□ 2.06
MFSD1-219ENST00000622669 GCC2Q8IWJ2 1684 aa27.93■■■□□ 2.06
MFSD1-219ENST00000622669 ERCC6Q03468 1493 aa27.93■■■□□ 2.06
MFSD1-219ENST00000622669 PELP1Q8IZL8 1130 aaKnown RBP27.93■■■□□ 2.06
MFSD1-219ENST00000622669 DDX10Q13206 875 aaKnown RBP27.92■■■□□ 2.06
MFSD1-219ENST00000622669 KDM6BO15054 1643 aa27.92■■■□□ 2.06
MFSD1-219ENST00000622669 KCNH8Q96L42 1107 aa27.92■■■□□ 2.06
MFSD1-219ENST00000622669 NUP153P49790 1475 aaKnown RBP27.9■■■□□ 2.06
MFSD1-219ENST00000622669 MIA2Q96PC5 1412 aa27.9■■■□□ 2.06
MFSD1-219ENST00000622669 DENND4BO75064 1496 aaPredicted RBP27.88■■■□□ 2.05
MFSD1-219ENST00000622669 RAPGEF6Q8TEU7 1601 aa27.86■■■□□ 2.05
MFSD1-219ENST00000622669 KDM5BQ9UGL1 1544 aa27.85■■■□□ 2.05
MFSD1-219ENST00000622669 AKNAQ7Z591 1439 aa27.84■■■□□ 2.05
MFSD1-219ENST00000622669 CEP170Q5SW79 1584 aa27.83■■■□□ 2.05
MFSD1-219ENST00000622669 MAGI1Q96QZ7 1491 aaPredicted RBP27.82■■■□□ 2.04
MFSD1-219ENST00000622669 CHMP7Q8WUX9 453 aaPredicted RBP27.78■■■□□ 2.04
MFSD1-219ENST00000622669 TRIM52Q96A61 297 aa27.78■■■□□ 2.04
MFSD1-219ENST00000622669 SYNJ2O15056 1496 aa27.77■■■□□ 2.04
MFSD1-219ENST00000622669 ZNF644Q9H582 1327 aaPredicted RBP27.77■■■□□ 2.04
MFSD1-219ENST00000622669 DAPK1P53355 1430 aa27.75■■■□□ 2.03
MFSD1-219ENST00000622669 FBLN2P98095 1184 aa27.73■■■□□ 2.03
MFSD1-219ENST00000622669 PLB1Q6P1J6 1458 aa27.73■■■□□ 2.03
MFSD1-219ENST00000622669 DNMT1P26358 1616 aaKnown RBP27.72■■■□□ 2.03
MFSD1-219ENST00000622669 ABCC5O15440 1437 aa27.72■■■□□ 2.03
MFSD1-219ENST00000622669 PRG4Q92954 1404 aaPredicted RBP27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms