RNA–Protein interactions for RNA: ENST00000622176.4

SLC6A6-209, Transcript of solute carrier family 6 member 6, humanhuman

TSL 1 (best)

Gene SLC6A6, Length 1,116 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-209ENST00000622176 CEP170Q5SW79 1584 aa28.92■■■□□ 2.22
SLC6A6-209ENST00000622176 CLASP1Q7Z460 1538 aa28.89■■■□□ 2.22
SLC6A6-209ENST00000622176 KIF21BO75037 1637 aa28.8■■■□□ 2.2
SLC6A6-209ENST00000622176 KIAA0586Q9BVV6 1533 aa28.79■■■□□ 2.2
SLC6A6-209ENST00000622176 JPH4Q96JJ6 628 aa28.7■■■□□ 2.18
SLC6A6-209ENST00000622176 SHROOM2Q13796 1616 aa28.68■■■□□ 2.18
SLC6A6-209ENST00000622176 GOLGA3Q08378 1498 aa28.67■■■□□ 2.18
SLC6A6-209ENST00000622176 ARAP1Q96P48 1450 aa28.67■■■□□ 2.18
SLC6A6-209ENST00000622176 IQGAP2Q13576 1575 aa28.65■■■□□ 2.18
SLC6A6-209ENST00000622176 CTTNBP2Q8WZ74 1663 aa28.61■■■□□ 2.17
SLC6A6-209ENST00000622176 CYB5RLQ6IPT4 315 aa28.61■■■□□ 2.17
SLC6A6-209ENST00000622176 EHMT2Q96KQ7 1210 aa28.58■■■□□ 2.17
SLC6A6-209ENST00000622176 PRG4Q92954 1404 aaPredicted RBP28.58■■■□□ 2.17
SLC6A6-209ENST00000622176 UBTFP17480 764 aaKnown RBP28.57■■■□□ 2.16
SLC6A6-209ENST00000622176 UGGT2Q9NYU1 1516 aa28.54■■■□□ 2.16
SLC6A6-209ENST00000622176 ERCC6L2Q5T890 1561 aa28.52■■■□□ 2.16
SLC6A6-209ENST00000622176 CARMIL2Q6F5E8 1435 aa28.46■■■□□ 2.15
SLC6A6-209ENST00000622176 DISP1Q96F81 1524 aa28.45■■■□□ 2.15
SLC6A6-209ENST00000622176 TNIKQ9UKE5 1360 aa28.41■■■□□ 2.14
SLC6A6-209ENST00000622176 LOC105371045A0A1W2PR82 267 aa28.38■■■□□ 2.13
SLC6A6-209ENST00000622176 KIAA0556O60303 1618 aa28.36■■■□□ 2.13
SLC6A6-209ENST00000622176 SAMD9Q5K651 1589 aa28.33■■■□□ 2.12
SLC6A6-209ENST00000622176 RANGAP1P46060 587 aaPredicted RBP28.32■■■□□ 2.12
SLC6A6-209ENST00000622176 PTPRGP23470 1445 aa28.31■■■□□ 2.12
SLC6A6-209ENST00000622176 EFCAB5A4FU69 1503 aa28.28■■■□□ 2.12
SLC6A6-209ENST00000622176 P3H3Q8IVL6 736 aa28.26■■■□□ 2.11
SLC6A6-209ENST00000622176 TRHP20396 242 aaPredicted RBP28.23■■■□□ 2.11
SLC6A6-209ENST00000622176 ARHGAP35Q9NRY4 1499 aa28.21■■■□□ 2.11
SLC6A6-209ENST00000622176 TTBK1Q5TCY1 1321 aaPredicted RBP28.2■■■□□ 2.11
SLC6A6-209ENST00000622176 FHOD3Q2V2M9 1422 aa28.18■■■□□ 2.1
SLC6A6-209ENST00000622176 CLIP1P30622 1438 aa28.18■■■□□ 2.1
SLC6A6-209ENST00000622176 CEP162Q5TB80 1403 aa28.14■■■□□ 2.1
SLC6A6-209ENST00000622176 UACAQ9BZF9 1416 aa28.12■■■□□ 2.09
SLC6A6-209ENST00000622176 UHRF1BP1LA0JNW5 1464 aa28.09■■■□□ 2.09
SLC6A6-209ENST00000622176 PLB1Q6P1J6 1458 aa28.08■■■□□ 2.09
SLC6A6-209ENST00000622176 ABCA8O94911 1581 aa28.07■■■□□ 2.08
SLC6A6-209ENST00000622176 ADCY10Q96PN6 1610 aa28.07■■■□□ 2.08
SLC6A6-209ENST00000622176 ABCC2Q92887 1545 aa28.05■■■□□ 2.08
SLC6A6-209ENST00000622176 FMN1Q68DA7 1419 aa28.03■■■□□ 2.08
SLC6A6-209ENST00000622176 NPM1P06748 294 aaKnown RBP eCLIP27.96■■■□□ 2.07
SLC6A6-209ENST00000622176 RAPGEF6Q8TEU7 1601 aa27.96■■■□□ 2.07
SLC6A6-209ENST00000622176 KDM5BQ9UGL1 1544 aa27.94■■■□□ 2.06
SLC6A6-209ENST00000622176 NUP153P49790 1475 aaKnown RBP27.89■■■□□ 2.06
SLC6A6-209ENST00000622176 KIF13AQ9H1H9 1805 aa27.88■■■□□ 2.05
SLC6A6-209ENST00000622176 CASKIN1Q8WXD9 1431 aa27.86■■■□□ 2.05
SLC6A6-209ENST00000622176 ATP10BO94823 1461 aa27.85■■■□□ 2.05
SLC6A6-209ENST00000622176 MAPKBP1O60336 1514 aa27.83■■■□□ 2.05
SLC6A6-209ENST00000622176 ZCCHC11Q5TAX3 1644 aaKnown RBP27.83■■■□□ 2.05
SLC6A6-209ENST00000622176 ARID3CA6NKF2 412 aa27.81■■■□□ 2.04
SLC6A6-209ENST00000622176 PCF11O94913 1555 aaKnown RBP27.81■■■□□ 2.04
SLC6A6-209ENST00000622176 HECW1Q76N89 1606 aa27.81■■■□□ 2.04
SLC6A6-209ENST00000622176 FYCO1Q9BQS8 1478 aa27.8■■■□□ 2.04
SLC6A6-209ENST00000622176 ATP1B4Q9UN42 357 aaPredicted RBP27.79■■■□□ 2.04
SLC6A6-209ENST00000622176 VPS8Q8N3P4 1428 aa27.78■■■□□ 2.04
SLC6A6-209ENST00000622176 ASXL2Q76L83 1435 aa27.76■■■□□ 2.04
SLC6A6-209ENST00000622176 EPRSP07814 1512 aaKnown RBP27.76■■■□□ 2.03
SLC6A6-209ENST00000622176 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.72■■■□□ 2.03
SLC6A6-209ENST00000622176 HNRNPUL2Q1KMD3 747 aaKnown RBP27.72■■■□□ 2.03
SLC6A6-209ENST00000622176 CDK13Q14004 1512 aaKnown RBP27.72■■■□□ 2.03
SLC6A6-209ENST00000622176 CCDC18Q5T9S5 1454 aa27.69■■■□□ 2.02
SLC6A6-209ENST00000622176 WDR7Q9Y4E6 1490 aa27.69■■■□□ 2.02
SLC6A6-209ENST00000622176 ABCC10Q5T3U5 1492 aa27.67■■■□□ 2.02
SLC6A6-209ENST00000622176 LRRIQ1Q96JM4 1722 aa27.67■■■□□ 2.02
SLC6A6-209ENST00000622176 DIP2BQ9P265 1576 aa27.65■■■□□ 2.02
SLC6A6-209ENST00000622176 PLEKHD1A6NEE1 506 aa27.65■■■□□ 2.02
SLC6A6-209ENST00000622176 CDK11AQ9UQ88 783 aaPredicted RBP27.63■■■□□ 2.01
SLC6A6-209ENST00000622176 FAM69CQ0P6D2 419 aa27.59■■■□□ 2.01
SLC6A6-209ENST00000622176 KCNH8Q96L42 1107 aa27.57■■■□□ 2
SLC6A6-209ENST00000622176 GLI2P10070 1586 aa27.56■■■□□ 2
SLC6A6-209ENST00000622176 TSPOAP1O95153 1857 aa27.55■■■□□ 2
SLC6A6-209ENST00000622176 TROQ12816 1431 aaPredicted RBP27.54■■■□□ 2
SLC6A6-209ENST00000622176 MAP3K1Q13233 1512 aa27.51■■■□□ 2
SLC6A6-209ENST00000622176 MAGI3Q5TCQ9 1506 aa27.5■■□□□ 1.99
SLC6A6-209ENST00000622176 TIAM1Q13009 1591 aa27.48■■□□□ 1.99
SLC6A6-209ENST00000622176 CFAP43Q8NDM7 1665 aa27.47■■□□□ 1.99
SLC6A6-209ENST00000622176 APLP2Q06481 763 aa27.45■■□□□ 1.98
SLC6A6-209ENST00000622176 MTUS2Q5JR59 1369 aa27.44■■□□□ 1.98
SLC6A6-209ENST00000622176 ABCA9Q8IUA7 1624 aa27.43■■□□□ 1.98
SLC6A6-209ENST00000622176 MAP3K4Q9Y6R4 1608 aa27.41■■□□□ 1.98
SLC6A6-209ENST00000622176 KIF14Q15058 1648 aa27.4■■□□□ 1.98
SLC6A6-209ENST00000622176 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.4■■□□□ 1.987e-8■■■□□ 15.3
SLC6A6-209ENST00000622176 CD109Q6YHK3 1445 aa27.4■■□□□ 1.98
SLC6A6-209ENST00000622176 LRRC9Q6ZRR7 1453 aa27.39■■□□□ 1.98
SLC6A6-209ENST00000622176 EHBP1L1Q8N3D4 1523 aa27.39■■□□□ 1.98
SLC6A6-209ENST00000622176 KANK4Q5T7N3 995 aaPredicted RBP27.37■■□□□ 1.97
SLC6A6-209ENST00000622176 KDM6BO15054 1643 aa27.37■■□□□ 1.97
SLC6A6-209ENST00000622176 TTC37Q6PGP7 1564 aa27.35■■□□□ 1.97
SLC6A6-209ENST00000622176 PPRC1Q5VV67 1664 aaKnown RBP27.33■■□□□ 1.97
SLC6A6-209ENST00000622176 TEX14Q8IWB6 1497 aa27.28■■□□□ 1.96
SLC6A6-209ENST00000622176 PLCH2O75038 1416 aa27.28■■□□□ 1.96
SLC6A6-209ENST00000622176 NCOA2Q15596 1464 aa27.25■■□□□ 1.95
SLC6A6-209ENST00000622176 SUPT6HQ7KZ85 1726 aaKnown RBP27.24■■□□□ 1.95
SLC6A6-209ENST00000622176 ARAP3Q8WWN8 1544 aa27.24■■□□□ 1.95
SLC6A6-209ENST00000622176 GPATCH8Q9UKJ3 1502 aaKnown RBP27.22■■□□□ 1.95
SLC6A6-209ENST00000622176 CCNB3Q8WWL7 1395 aa27.22■■□□□ 1.95
SLC6A6-209ENST00000622176 MYO5CQ9NQX4 1742 aa27.21■■□□□ 1.95
SLC6A6-209ENST00000622176 AEBP2Q6ZN18 517 aaPredicted RBP27.21■■□□□ 1.95
SLC6A6-209ENST00000622176 PHLDB1Q86UU1 1377 aa27.19■■□□□ 1.94
SLC6A6-209ENST00000622176 NEO1Q92859 1461 aa27.19■■□□□ 1.94
SLC6A6-209ENST00000622176 EFCAB2Q5VUJ9 269 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms