RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 OSCARQ8IYS5 282 aa18.7■□□□□ 0.58
SCAMP1-207ENST00000621999 KCNH8Q96L42 1107 aa18.68■□□□□ 0.58
SCAMP1-207ENST00000621999 FHAD1B1AJZ9 1412 aa18.68■□□□□ 0.58
SCAMP1-207ENST00000621999 MTUS2Q5JR59 1369 aa18.67■□□□□ 0.58
SCAMP1-207ENST00000621999 BIVM-ERCC5R4GMW8 1640 aa18.67■□□□□ 0.58
SCAMP1-207ENST00000621999 SNAPC4Q5SXM2 1469 aa18.65■□□□□ 0.58
SCAMP1-207ENST00000621999 CARMIL2Q6F5E8 1435 aa18.64■□□□□ 0.57
SCAMP1-207ENST00000621999 PLEKHD1A6NEE1 506 aa18.62■□□□□ 0.57
SCAMP1-207ENST00000621999 FHOD3Q2V2M9 1422 aa18.62■□□□□ 0.57
SCAMP1-207ENST00000621999 PRXQ9BXM0 1461 aa18.59■□□□□ 0.57
SCAMP1-207ENST00000621999 PRDM2Q13029 1718 aa18.56■□□□□ 0.56
SCAMP1-207ENST00000621999 VPS8Q8N3P4 1428 aa18.54■□□□□ 0.56
SCAMP1-207ENST00000621999 WDR62O43379 1518 aa18.52■□□□□ 0.56
SCAMP1-207ENST00000621999 KIF21BO75037 1637 aa18.5■□□□□ 0.55
SCAMP1-207ENST00000621999 CYB5RLQ6IPT4 315 aa18.5■□□□□ 0.55
SCAMP1-207ENST00000621999 FMN1Q68DA7 1419 aa18.49■□□□□ 0.55
SCAMP1-207ENST00000621999 KANK4Q5T7N3 995 aaPredicted RBP18.49■□□□□ 0.55
SCAMP1-207ENST00000621999 ERICH3Q5RHP9 1530 aa18.49■□□□□ 0.55
SCAMP1-207ENST00000621999 TRIM52Q96A61 297 aa18.48■□□□□ 0.55
SCAMP1-207ENST00000621999 CHIC2Q9UKJ5 165 aa18.47■□□□□ 0.55
SCAMP1-207ENST00000621999 PTPRGP23470 1445 aa18.46■□□□□ 0.55
SCAMP1-207ENST00000621999 SYNJ2O15056 1496 aa18.44■□□□□ 0.54
SCAMP1-207ENST00000621999 MAGI1Q96QZ7 1491 aaPredicted RBP18.43■□□□□ 0.54
SCAMP1-207ENST00000621999 CFDP1Q9UEE9 299 aaPredicted RBP18.41■□□□□ 0.54
SCAMP1-207ENST00000621999 PRG4Q92954 1404 aaPredicted RBP18.4■□□□□ 0.54
SCAMP1-207ENST00000621999 GRIN2AQ12879 1464 aa18.4■□□□□ 0.54
SCAMP1-207ENST00000621999 CUL7Q14999 1698 aa18.37■□□□□ 0.53
SCAMP1-207ENST00000621999 ZEB1P37275 1124 aaPredicted RBP18.35■□□□□ 0.53
SCAMP1-207ENST00000621999 KIAA0586Q9BVV6 1533 aa18.35■□□□□ 0.53
SCAMP1-207ENST00000621999 ARHGAP35Q9NRY4 1499 aa18.35■□□□□ 0.53
SCAMP1-207ENST00000621999 TSPY4P0CV99 314 aa18.35■□□□□ 0.53
SCAMP1-207ENST00000621999 TSPY10P0CW01 314 aa18.35■□□□□ 0.53
SCAMP1-207ENST00000621999 EIF4G3O43432 1585 aaKnown RBP18.34■□□□□ 0.53
SCAMP1-207ENST00000621999 ARAP1Q96P48 1450 aa18.33■□□□□ 0.52
SCAMP1-207ENST00000621999 TRHP20396 242 aaPredicted RBP18.33■□□□□ 0.52
SCAMP1-207ENST00000621999 CCNB3Q8WWL7 1395 aa18.31■□□□□ 0.52
SCAMP1-207ENST00000621999 THOC2Q8NI27 1593 aaKnown RBP18.31■□□□□ 0.52
SCAMP1-207ENST00000621999 TARBP1Q13395 1621 aaKnown RBP18.29■□□□□ 0.52
SCAMP1-207ENST00000621999 RRP7BPQ9NSQ0 103 aa18.29■□□□□ 0.52
SCAMP1-207ENST00000621999 IQGAP2Q13576 1575 aa18.27■□□□□ 0.52
SCAMP1-207ENST00000621999 NEUROD1Q13562 356 aa18.26■□□□□ 0.51
SCAMP1-207ENST00000621999 ABCA5Q8WWZ7 1642 aa18.23■□□□□ 0.51
SCAMP1-207ENST00000621999 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.21■□□□□ 0.514e-6■■■■□ 19.8
SCAMP1-207ENST00000621999 ADAMTS12P58397 1594 aa18.21■□□□□ 0.51
SCAMP1-207ENST00000621999 EFCAB5A4FU69 1503 aa18.18■□□□□ 0.5
SCAMP1-207ENST00000621999 PBRM1Q86U86 1689 aa18.17■□□□□ 0.5
SCAMP1-207ENST00000621999 CASKIN1Q8WXD9 1431 aa18.16■□□□□ 0.5
SCAMP1-207ENST00000621999 HRCP23327 699 aa18.14■□□□□ 0.49
SCAMP1-207ENST00000621999 CCDC18Q5T9S5 1454 aa18.14■□□□□ 0.49
SCAMP1-207ENST00000621999 EFCAB2Q5VUJ9 269 aa18.13■□□□□ 0.49
SCAMP1-207ENST00000621999 PLPPR3Q6T4P5 718 aa18.12■□□□□ 0.49
SCAMP1-207ENST00000621999 PLB1Q6P1J6 1458 aa18.1■□□□□ 0.49
SCAMP1-207ENST00000621999 HNRNPMP52272 730 aaKnown RBP eCLIP18.1■□□□□ 0.49
SCAMP1-207ENST00000621999 ESF1Q9H501 851 aaKnown RBP18.1■□□□□ 0.49
SCAMP1-207ENST00000621999 FYCO1Q9BQS8 1478 aa18.07■□□□□ 0.48
SCAMP1-207ENST00000621999 FAM69CQ0P6D2 419 aa18.06■□□□□ 0.48
SCAMP1-207ENST00000621999 UACAQ9BZF9 1416 aa18.06■□□□□ 0.48
SCAMP1-207ENST00000621999 NUP160Q12769 1436 aa18.05■□□□□ 0.48
SCAMP1-207ENST00000621999 ZNF326Q5BKZ1 582 aaKnown RBP18.05■□□□□ 0.48
SCAMP1-207ENST00000621999 WDR97A6NE52 1622 aa18.03■□□□□ 0.48
SCAMP1-207ENST00000621999 LRRC9Q6ZRR7 1453 aa18.03■□□□□ 0.48
SCAMP1-207ENST00000621999 ZNF644Q9H582 1327 aaPredicted RBP18.02■□□□□ 0.48
SCAMP1-207ENST00000621999 CDK13Q14004 1512 aaKnown RBP18.02■□□□□ 0.47
SCAMP1-207ENST00000621999 SLC4A1APQ9BWU0 796 aaKnown RBP18.01■□□□□ 0.47
SCAMP1-207ENST00000621999 CTTNBP2Q8WZ74 1663 aa18.01■□□□□ 0.47
SCAMP1-207ENST00000621999 ARID4BQ4LE39 1312 aaPredicted RBP18■□□□□ 0.47
SCAMP1-207ENST00000621999 PHLDB1Q86UU1 1377 aa17.99■□□□□ 0.47
SCAMP1-207ENST00000621999 CEP170Q5SW79 1584 aa17.98■□□□□ 0.47
SCAMP1-207ENST00000621999 EPRSP07814 1512 aaKnown RBP17.98■□□□□ 0.47
SCAMP1-207ENST00000621999 PCF11O94913 1555 aaKnown RBP17.98■□□□□ 0.47
SCAMP1-207ENST00000621999 CHGAP10645 457 aaKnown RBP17.97■□□□□ 0.47
SCAMP1-207ENST00000621999 POLR3GLQ9BT43 218 aa17.96■□□□□ 0.47
SCAMP1-207ENST00000621999 HECW1Q76N89 1606 aa17.95■□□□□ 0.46
SCAMP1-207ENST00000621999 UGGT2Q9NYU1 1516 aa17.95■□□□□ 0.46
SCAMP1-207ENST00000621999 NCOA2Q15596 1464 aa17.95■□□□□ 0.46
SCAMP1-207ENST00000621999 MLECQ14165 292 aa17.93■□□□□ 0.46
SCAMP1-207ENST00000621999 TROQ12816 1431 aaPredicted RBP17.92■□□□□ 0.46
SCAMP1-207ENST00000621999 TIAM1Q13009 1591 aa17.91■□□□□ 0.46
SCAMP1-207ENST00000621999 SPAG9O60271 1321 aaKnown RBP17.91■□□□□ 0.46
SCAMP1-207ENST00000621999 DISP1Q96F81 1524 aa17.91■□□□□ 0.46
SCAMP1-207ENST00000621999 MYOM3Q5VTT5 1437 aa17.9■□□□□ 0.46
SCAMP1-207ENST00000621999 KIAA0556O60303 1618 aa17.9■□□□□ 0.46
SCAMP1-207ENST00000621999 CHD1O14646 1710 aa17.9■□□□□ 0.46
SCAMP1-207ENST00000621999 GGT6Q6P531 493 aa17.89■□□□□ 0.45
SCAMP1-207ENST00000621999 FGD6Q6ZV73 1430 aa17.89■□□□□ 0.45
SCAMP1-207ENST00000621999 STAG3Q9UJ98 1225 aa17.88■□□□□ 0.45
SCAMP1-207ENST00000621999 RSPH4AQ5TD94 716 aa17.88■□□□□ 0.45
SCAMP1-207ENST00000621999 ANKRD30AQ9BXX3 1397 aa17.86■□□□□ 0.45
SCAMP1-207ENST00000621999 SETD5Q9C0A6 1442 aa17.85■□□□□ 0.45
SCAMP1-207ENST00000621999 BCANQ96GW7 911 aa17.85■□□□□ 0.45
SCAMP1-207ENST00000621999 AFAP1Q8N556 730 aa17.85■□□□□ 0.45
SCAMP1-207ENST00000621999 TONSLQ96HA7 1378 aa17.85■□□□□ 0.45
SCAMP1-207ENST00000621999 KIF3BO15066 747 aa17.83■□□□□ 0.44
SCAMP1-207ENST00000621999 ATP10BO94823 1461 aa17.83■□□□□ 0.44
SCAMP1-207ENST00000621999 EHBP1L1Q8N3D4 1523 aa17.83■□□□□ 0.44
SCAMP1-207ENST00000621999 NUP153P49790 1475 aaKnown RBP17.83■□□□□ 0.44
SCAMP1-207ENST00000621999 RAB3GAP2Q9H2M9 1393 aa17.82■□□□□ 0.44
SCAMP1-207ENST00000621999 KDM2AQ9Y2K7 1162 aa17.82■□□□□ 0.44
SCAMP1-207ENST00000621999 SENP3Q9H4L4 574 aaPredicted RBP17.81■□□□□ 0.44
SCAMP1-207ENST00000621999 ARHGAP5Q13017 1502 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms