RNA–Protein interactions for RNA: ENST00000621737.4

PTBP1-219, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5

Gene PTBP1, Length 1,125 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-219ENST00000621737 JPH4Q96JJ6 628 aa33.79■■■■□ 3
PTBP1-219ENST00000621737 CARMIL1Q5VZK9 1371 aa33.79■■■■□ 3
PTBP1-219ENST00000621737 KIAA0586Q9BVV6 1533 aa33.78■■■■□ 3
PTBP1-219ENST00000621737 TRHP20396 242 aaPredicted RBP33.71■■■□□ 2.99
PTBP1-219ENST00000621737 RAPGEF2Q9Y4G8 1499 aa33.56■■■□□ 2.96
PTBP1-219ENST00000621737 IQGAP2Q13576 1575 aa33.55■■■□□ 2.96
PTBP1-219ENST00000621737 CARMIL2Q6F5E8 1435 aa33.42■■■□□ 2.94
PTBP1-219ENST00000621737 ADCY10Q96PN6 1610 aa33.41■■■□□ 2.94
PTBP1-219ENST00000621737 PRXQ9BXM0 1461 aa33.35■■■□□ 2.93
PTBP1-219ENST00000621737 UGGT2Q9NYU1 1516 aa33.34■■■□□ 2.93
PTBP1-219ENST00000621737 PTPRGP23470 1445 aa33.34■■■□□ 2.93
PTBP1-219ENST00000621737 TNIKQ9UKE5 1360 aa33.34■■■□□ 2.93
PTBP1-219ENST00000621737 DISP1Q96F81 1524 aa33.33■■■□□ 2.93
PTBP1-219ENST00000621737 CTTNBP2Q8WZ74 1663 aa33.33■■■□□ 2.93
PTBP1-219ENST00000621737 MAPKBP1O60336 1514 aa33.3■■■□□ 2.92
PTBP1-219ENST00000621737 NPM1P06748 294 aaKnown RBP eCLIP33.28■■■□□ 2.92
PTBP1-219ENST00000621737 KIF13AQ9H1H9 1805 aa33.25■■■□□ 2.91
PTBP1-219ENST00000621737 KIAA0556O60303 1618 aa33.24■■■□□ 2.91
PTBP1-219ENST00000621737 TTBK1Q5TCY1 1321 aaPredicted RBP33.19■■■□□ 2.9
PTBP1-219ENST00000621737 EEA1Q15075 1411 aa33.18■■■□□ 2.9
PTBP1-219ENST00000621737 ABCC10Q5T3U5 1492 aa33.17■■■□□ 2.9
PTBP1-219ENST00000621737 UHRF1BP1LA0JNW5 1464 aa33.15■■■□□ 2.9
PTBP1-219ENST00000621737 ABCC2Q92887 1545 aa33.14■■■□□ 2.9
PTBP1-219ENST00000621737 CSRNP3Q8WYN3 585 aa33.14■■■□□ 2.9
PTBP1-219ENST00000621737 DIP2BQ9P265 1576 aa33.13■■■□□ 2.89
PTBP1-219ENST00000621737 GOLGA3Q08378 1498 aa33.12■■■□□ 2.89
PTBP1-219ENST00000621737 UACAQ9BZF9 1416 aa33.11■■■□□ 2.89
PTBP1-219ENST00000621737 FAM69CQ0P6D2 419 aa33.05■■■□□ 2.88
PTBP1-219ENST00000621737 KDM5BQ9UGL1 1544 aa32.98■■■□□ 2.87
PTBP1-219ENST00000621737 ASXL2Q76L83 1435 aa32.96■■■□□ 2.87
PTBP1-219ENST00000621737 PLB1Q6P1J6 1458 aa32.95■■■□□ 2.87
PTBP1-219ENST00000621737 ZCCHC11Q5TAX3 1644 aaKnown RBP32.92■■■□□ 2.86
PTBP1-219ENST00000621737 CHIC1Q5VXU3 224 aa32.92■■■□□ 2.86
PTBP1-219ENST00000621737 KIF21BO75037 1637 aa32.9■■■□□ 2.86
PTBP1-219ENST00000621737 ABCA8O94911 1581 aa32.89■■■□□ 2.86
PTBP1-219ENST00000621737 FAM9AQ8IZU1 332 aaPredicted RBP32.89■■■□□ 2.86
PTBP1-219ENST00000621737 SAMD9Q5K651 1589 aa32.87■■■□□ 2.85
PTBP1-219ENST00000621737 GLI2P10070 1586 aa32.86■■■□□ 2.85
PTBP1-219ENST00000621737 TSPOAP1O95153 1857 aa32.82■■■□□ 2.84
PTBP1-219ENST00000621737 EPRSP07814 1512 aaKnown RBP32.77■■■□□ 2.84
PTBP1-219ENST00000621737 P3H3Q8IVL6 736 aa32.74■■■□□ 2.83
PTBP1-219ENST00000621737 WDR7Q9Y4E6 1490 aa32.74■■■□□ 2.83
PTBP1-219ENST00000621737 KDM6BO15054 1643 aa32.71■■■□□ 2.83
PTBP1-219ENST00000621737 PPRC1Q5VV67 1664 aaKnown RBP32.71■■■□□ 2.83
PTBP1-219ENST00000621737 MAP3K4Q9Y6R4 1608 aa32.69■■■□□ 2.82
PTBP1-219ENST00000621737 EFCAB5A4FU69 1503 aa32.64■■■□□ 2.82
PTBP1-219ENST00000621737 RAPGEF6Q8TEU7 1601 aa32.63■■■□□ 2.81
PTBP1-219ENST00000621737 FHOD3Q2V2M9 1422 aa32.6■■■□□ 2.81
PTBP1-219ENST00000621737 RANGAP1P46060 587 aaPredicted RBP32.6■■■□□ 2.81
PTBP1-219ENST00000621737 ATP10BO94823 1461 aa32.57■■■□□ 2.8
PTBP1-219ENST00000621737 TEX14Q8IWB6 1497 aa32.56■■■□□ 2.8
PTBP1-219ENST00000621737 CFAP43Q8NDM7 1665 aa32.53■■■□□ 2.8
PTBP1-219ENST00000621737 UBTFP17480 764 aaKnown RBP32.51■■■□□ 2.79
PTBP1-219ENST00000621737 NUP153P49790 1475 aaKnown RBP32.5■■■□□ 2.79
PTBP1-219ENST00000621737 ARID3CA6NKF2 412 aa32.5■■■□□ 2.79
PTBP1-219ENST00000621737 EHMT2Q96KQ7 1210 aa32.48■■■□□ 2.79
PTBP1-219ENST00000621737 KCNH8Q96L42 1107 aa32.47■■■□□ 2.79
PTBP1-219ENST00000621737 CD109Q6YHK3 1445 aa32.45■■■□□ 2.79
PTBP1-219ENST00000621737 MAGI3Q5TCQ9 1506 aa32.45■■■□□ 2.78
PTBP1-219ENST00000621737 COL17A1Q9UMD9 1497 aaPredicted RBP32.39■■■□□ 2.78
PTBP1-219ENST00000621737 ARHGAP35Q9NRY4 1499 aa32.37■■■□□ 2.77
PTBP1-219ENST00000621737 ABCA9Q8IUA7 1624 aa32.37■■■□□ 2.77
PTBP1-219ENST00000621737 AEBP2Q6ZN18 517 aaPredicted RBP32.36■■■□□ 2.77
PTBP1-219ENST00000621737 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.35■■■□□ 2.77
PTBP1-219ENST00000621737 HNRNPUL2Q1KMD3 747 aaKnown RBP32.35■■■□□ 2.77
PTBP1-219ENST00000621737 FMN1Q68DA7 1419 aa32.31■■■□□ 2.76
PTBP1-219ENST00000621737 HECW1Q76N89 1606 aa32.25■■■□□ 2.75
PTBP1-219ENST00000621737 CDK13Q14004 1512 aaKnown RBP32.21■■■□□ 2.75
PTBP1-219ENST00000621737 PLEKHD1A6NEE1 506 aa32.21■■■□□ 2.75
PTBP1-219ENST00000621737 ARAP3Q8WWN8 1544 aa32.18■■■□□ 2.74
PTBP1-219ENST00000621737 PHLDB1Q86UU1 1377 aa32.15■■■□□ 2.74
PTBP1-219ENST00000621737 NEO1Q92859 1461 aa32.14■■■□□ 2.74
PTBP1-219ENST00000621737 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.11■■■□□ 2.737e-8■■□□□ 14.2
PTBP1-219ENST00000621737 TTC37Q6PGP7 1564 aa32.09■■■□□ 2.73
PTBP1-219ENST00000621737 KDM4FA0A1W2PPD8 638 aa32.08■■■□□ 2.73
PTBP1-219ENST00000621737 ATP1B4Q9UN42 357 aaPredicted RBP32.08■■■□□ 2.73
PTBP1-219ENST00000621737 LRRIQ1Q96JM4 1722 aa32.03■■■□□ 2.72
PTBP1-219ENST00000621737 PCF11O94913 1555 aaKnown RBP32.03■■■□□ 2.72
PTBP1-219ENST00000621737 CFAP74Q9C0B2 1584 aa32.03■■■□□ 2.72
PTBP1-219ENST00000621737 CLIP1P30622 1438 aa32.02■■■□□ 2.72
PTBP1-219ENST00000621737 ADGRL1O94910 1474 aa32.02■■■□□ 2.72
PTBP1-219ENST00000621737 CASKIN1Q8WXD9 1431 aa32■■■□□ 2.71
PTBP1-219ENST00000621737 CDK11AQ9UQ88 783 aaPredicted RBP32■■■□□ 2.71
PTBP1-219ENST00000621737 FANCAO15360 1455 aa31.98■■■□□ 2.71
PTBP1-219ENST00000621737 FRMPD1Q5SYB0 1578 aa31.97■■■□□ 2.71
PTBP1-219ENST00000621737 CCDC18Q5T9S5 1454 aa31.96■■■□□ 2.71
PTBP1-219ENST00000621737 KIF14Q15058 1648 aa31.95■■■□□ 2.71
PTBP1-219ENST00000621737 TROQ12816 1431 aaPredicted RBP31.94■■■□□ 2.7
PTBP1-219ENST00000621737 FYCO1Q9BQS8 1478 aa31.94■■■□□ 2.7
PTBP1-219ENST00000621737 AKNAQ7Z591 1439 aa31.93■■■□□ 2.7
PTBP1-219ENST00000621737 RAPGEF3O95398 923 aa31.92■■■□□ 2.7
PTBP1-219ENST00000621737 MYO5CQ9NQX4 1742 aa31.9■■■□□ 2.7
PTBP1-219ENST00000621737 PLCH2O75038 1416 aa31.9■■■□□ 2.7
PTBP1-219ENST00000621737 DENND4BO75064 1496 aaPredicted RBP31.89■■■□□ 2.7
PTBP1-219ENST00000621737 RICTORQ6R327 1708 aa31.89■■■□□ 2.69
PTBP1-219ENST00000621737 ZMYM4Q5VZL5 1548 aa31.79■■■□□ 2.68
PTBP1-219ENST00000621737 ARHGEF40Q8TER5 1519 aa31.79■■■□□ 2.68
PTBP1-219ENST00000621737 CEP162Q5TB80 1403 aa31.77■■■□□ 2.68
PTBP1-219ENST00000621737 EFCAB2Q5VUJ9 269 aa31.74■■■□□ 2.67
PTBP1-219ENST00000621737 ARHGAP5Q13017 1502 aa31.74■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms