RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 RUSC2Q8N2Y8 1516 aa27.67■■■□□ 2.02
CD40-207ENST00000620709 CUL7Q14999 1698 aa27.65■■■□□ 2.02
CD40-207ENST00000620709 CARMIL1Q5VZK9 1371 aa27.56■■■□□ 2
CD40-207ENST00000620709 KIAA0586Q9BVV6 1533 aa27.55■■■□□ 2
CD40-207ENST00000620709 TTBK1Q5TCY1 1321 aaPredicted RBP27.46■■□□□ 1.99
CD40-207ENST00000620709 NPM1P06748 294 aaKnown RBP eCLIP27.45■■□□□ 1.98
CD40-207ENST00000620709 ADCY10Q96PN6 1610 aa27.35■■□□□ 1.97
CD40-207ENST00000620709 KIF13AQ9H1H9 1805 aa27.33■■□□□ 1.97
CD40-207ENST00000620709 IQGAP2Q13576 1575 aa27.33■■□□□ 1.97
CD40-207ENST00000620709 PTPRGP23470 1445 aa27.32■■□□□ 1.96
CD40-207ENST00000620709 CARMIL2Q6F5E8 1435 aa27.32■■□□□ 1.96
CD40-207ENST00000620709 RAPGEF2Q9Y4G8 1499 aa27.31■■□□□ 1.96
CD40-207ENST00000620709 FAM69CQ0P6D2 419 aa27.3■■□□□ 1.96
CD40-207ENST00000620709 TNIKQ9UKE5 1360 aa27.27■■□□□ 1.96
CD40-207ENST00000620709 MAPKBP1O60336 1514 aa27.24■■□□□ 1.95
CD40-207ENST00000620709 ABCC10Q5T3U5 1492 aa27.23■■□□□ 1.95
CD40-207ENST00000620709 DIP2BQ9P265 1576 aa27.17■■□□□ 1.94
CD40-207ENST00000620709 DISP1Q96F81 1524 aa27.16■■□□□ 1.94
CD40-207ENST00000620709 AEBP2Q6ZN18 517 aaPredicted RBP27.13■■□□□ 1.93
CD40-207ENST00000620709 UGGT2Q9NYU1 1516 aa27.13■■□□□ 1.93
CD40-207ENST00000620709 ABCC2Q92887 1545 aa27.1■■□□□ 1.93
CD40-207ENST00000620709 CTTNBP2Q8WZ74 1663 aa27.09■■□□□ 1.93
CD40-207ENST00000620709 TSPOAP1O95153 1857 aa27.09■■□□□ 1.93
CD40-207ENST00000620709 UACAQ9BZF9 1416 aa27.09■■□□□ 1.93
CD40-207ENST00000620709 KIAA0556O60303 1618 aa27.07■■□□□ 1.92
CD40-207ENST00000620709 UHRF1BP1LA0JNW5 1464 aa27.04■■□□□ 1.92
CD40-207ENST00000620709 ASXL2Q76L83 1435 aa27.03■■□□□ 1.92
CD40-207ENST00000620709 PRXQ9BXM0 1461 aa27.02■■□□□ 1.92
CD40-207ENST00000620709 PLB1Q6P1J6 1458 aa26.99■■□□□ 1.91
CD40-207ENST00000620709 GOLGA3Q08378 1498 aa26.96■■□□□ 1.91
CD40-207ENST00000620709 CSRNP3Q8WYN3 585 aa26.95■■□□□ 1.9
CD40-207ENST00000620709 KDM6BO15054 1643 aa26.94■■□□□ 1.9
CD40-207ENST00000620709 ZCCHC11Q5TAX3 1644 aaKnown RBP26.93■■□□□ 1.9
CD40-207ENST00000620709 KDM5BQ9UGL1 1544 aa26.92■■□□□ 1.9
CD40-207ENST00000620709 P3H3Q8IVL6 736 aa26.89■■□□□ 1.89
CD40-207ENST00000620709 FAM9AQ8IZU1 332 aaPredicted RBP26.88■■□□□ 1.89
CD40-207ENST00000620709 GLI2P10070 1586 aa26.87■■□□□ 1.89
CD40-207ENST00000620709 EPRSP07814 1512 aaKnown RBP26.84■■□□□ 1.89
CD40-207ENST00000620709 RANGAP1P46060 587 aaPredicted RBP26.81■■□□□ 1.88
CD40-207ENST00000620709 PPRC1Q5VV67 1664 aaKnown RBP26.81■■□□□ 1.88
CD40-207ENST00000620709 ABCA8O94911 1581 aa26.8■■□□□ 1.88
CD40-207ENST00000620709 ARID3CA6NKF2 412 aa26.79■■□□□ 1.88
CD40-207ENST00000620709 EEA1Q15075 1411 aa26.78■■□□□ 1.88
CD40-207ENST00000620709 WDR7Q9Y4E6 1490 aa26.78■■□□□ 1.88
CD40-207ENST00000620709 KCNH8Q96L42 1107 aa26.77■■□□□ 1.88
CD40-207ENST00000620709 MAP3K4Q9Y6R4 1608 aa26.75■■□□□ 1.87
CD40-207ENST00000620709 TEX14Q8IWB6 1497 aa26.7■■□□□ 1.86
CD40-207ENST00000620709 EHMT2Q96KQ7 1210 aa26.67■■□□□ 1.86
CD40-207ENST00000620709 SAMD9Q5K651 1589 aa26.67■■□□□ 1.86
CD40-207ENST00000620709 CD109Q6YHK3 1445 aa26.63■■□□□ 1.85
CD40-207ENST00000620709 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.62■■□□□ 1.85
CD40-207ENST00000620709 HNRNPUL2Q1KMD3 747 aaKnown RBP26.62■■□□□ 1.85
CD40-207ENST00000620709 COL17A1Q9UMD9 1497 aaPredicted RBP26.62■■□□□ 1.85
CD40-207ENST00000620709 ATP10BO94823 1461 aa26.6■■□□□ 1.85
CD40-207ENST00000620709 KDM4FA0A1W2PPD8 638 aa26.6■■□□□ 1.85
CD40-207ENST00000620709 CFAP43Q8NDM7 1665 aa26.59■■□□□ 1.85
CD40-207ENST00000620709 CHIC1Q5VXU3 224 aa26.59■■□□□ 1.85
CD40-207ENST00000620709 RAPGEF6Q8TEU7 1601 aa26.58■■□□□ 1.85
CD40-207ENST00000620709 FHOD3Q2V2M9 1422 aa26.58■■□□□ 1.85
CD40-207ENST00000620709 KIF21BO75037 1637 aa26.57■■□□□ 1.84
CD40-207ENST00000620709 MAGI3Q5TCQ9 1506 aa26.53■■□□□ 1.84
CD40-207ENST00000620709 UBTFP17480 764 aaKnown RBP26.52■■□□□ 1.84
CD40-207ENST00000620709 NUP153P49790 1475 aaKnown RBP26.46■■□□□ 1.83
CD40-207ENST00000620709 EFCAB5A4FU69 1503 aa26.44■■□□□ 1.82
CD40-207ENST00000620709 ADGRL1O94910 1474 aa26.43■■□□□ 1.82
CD40-207ENST00000620709 ABCA9Q8IUA7 1624 aa26.4■■□□□ 1.82
CD40-207ENST00000620709 PLEKHD1A6NEE1 506 aa26.38■■□□□ 1.81
CD40-207ENST00000620709 ATP1B4Q9UN42 357 aaPredicted RBP26.38■■□□□ 1.81
CD40-207ENST00000620709 ARAP3Q8WWN8 1544 aa26.31■■□□□ 1.8
CD40-207ENST00000620709 CDK13Q14004 1512 aaKnown RBP26.28■■□□□ 1.8
CD40-207ENST00000620709 PHLDB1Q86UU1 1377 aa26.27■■□□□ 1.8
CD40-207ENST00000620709 RAPGEF3O95398 923 aa26.27■■□□□ 1.8
CD40-207ENST00000620709 NEO1Q92859 1461 aa26.26■■□□□ 1.79
CD40-207ENST00000620709 ARHGAP35Q9NRY4 1499 aa26.26■■□□□ 1.79
CD40-207ENST00000620709 FMN1Q68DA7 1419 aa26.23■■□□□ 1.79
CD40-207ENST00000620709 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.2■■□□□ 1.78
CD40-207ENST00000620709 HECW1Q76N89 1606 aa26.19■■□□□ 1.78
CD40-207ENST00000620709 TTC37Q6PGP7 1564 aa26.18■■□□□ 1.78
CD40-207ENST00000620709 FANCAO15360 1455 aa26.15■■□□□ 1.78
CD40-207ENST00000620709 AKNAQ7Z591 1439 aa26.14■■□□□ 1.78
CD40-207ENST00000620709 CDK11AQ9UQ88 783 aaPredicted RBP26.13■■□□□ 1.77
CD40-207ENST00000620709 FRMPD1Q5SYB0 1578 aa26.13■■□□□ 1.77
CD40-207ENST00000620709 CFAP74Q9C0B2 1584 aa26.13■■□□□ 1.77
CD40-207ENST00000620709 DENND4BO75064 1496 aaPredicted RBP26.12■■□□□ 1.77
CD40-207ENST00000620709 ARID4BQ4LE39 1312 aaPredicted RBP26.11■■□□□ 1.77
CD40-207ENST00000620709 RICTORQ6R327 1708 aa26.05■■□□□ 1.76
CD40-207ENST00000620709 PLCH2O75038 1416 aa26.03■■□□□ 1.76
CD40-207ENST00000620709 LRRIQ1Q96JM4 1722 aa26.02■■□□□ 1.76
CD40-207ENST00000620709 KIF14Q15058 1648 aa26.02■■□□□ 1.76
CD40-207ENST00000620709 MYO5CQ9NQX4 1742 aa26.01■■□□□ 1.75
CD40-207ENST00000620709 HECW2Q9P2P5 1572 aa26.01■■□□□ 1.75
CD40-207ENST00000620709 CLIP1P30622 1438 aa26■■□□□ 1.75
CD40-207ENST00000620709 TROQ12816 1431 aaPredicted RBP26■■□□□ 1.75
CD40-207ENST00000620709 PCF11O94913 1555 aaKnown RBP25.99■■□□□ 1.75
CD40-207ENST00000620709 ARHGEF40Q8TER5 1519 aa25.99■■□□□ 1.75
CD40-207ENST00000620709 SCAPERQ9BY12 1400 aa25.99■■□□□ 1.75
CD40-207ENST00000620709 EFCAB2Q5VUJ9 269 aa25.98■■□□□ 1.75
CD40-207ENST00000620709 ADAMTSL3P82987 1691 aa25.96■■□□□ 1.75
CD40-207ENST00000620709 CASKIN1Q8WXD9 1431 aa25.96■■□□□ 1.75
CD40-207ENST00000620709 BCORL1Q5H9F3 1711 aa25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 334.2 ms