RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 JPH4Q96JJ6 628 aa29.62■■■□□ 2.33
HMGN3-203ENST00000620514 PRG4Q92954 1404 aaPredicted RBP29.61■■■□□ 2.33
HMGN3-203ENST00000620514 CARMIL1Q5VZK9 1371 aa29.54■■■□□ 2.32
HMGN3-203ENST00000620514 KIAA0586Q9BVV6 1533 aa29.5■■■□□ 2.31
HMGN3-203ENST00000620514 RAPGEF2Q9Y4G8 1499 aa29.3■■■□□ 2.28
HMGN3-203ENST00000620514 IQGAP2Q13576 1575 aa29.26■■■□□ 2.28
HMGN3-203ENST00000620514 ADCY10Q96PN6 1610 aa29.22■■■□□ 2.27
HMGN3-203ENST00000620514 TTBK1Q5TCY1 1321 aaPredicted RBP29.19■■■□□ 2.26
HMGN3-203ENST00000620514 PTPRGP23470 1445 aa29.18■■■□□ 2.26
HMGN3-203ENST00000620514 CARMIL2Q6F5E8 1435 aa29.18■■■□□ 2.26
HMGN3-203ENST00000620514 NPM1P06748 294 aaKnown RBP eCLIP29.16■■■□□ 2.26
HMGN3-203ENST00000620514 TNIKQ9UKE5 1360 aa29.15■■■□□ 2.26
HMGN3-203ENST00000620514 DISP1Q96F81 1524 aa29.14■■■□□ 2.25
HMGN3-203ENST00000620514 KIF13AQ9H1H9 1805 aa29.11■■■□□ 2.25
HMGN3-203ENST00000620514 PRXQ9BXM0 1461 aa29.1■■■□□ 2.25
HMGN3-203ENST00000620514 UGGT2Q9NYU1 1516 aa29.1■■■□□ 2.25
HMGN3-203ENST00000620514 MAPKBP1O60336 1514 aa29.09■■■□□ 2.25
HMGN3-203ENST00000620514 ABCC10Q5T3U5 1492 aa29.04■■■□□ 2.24
HMGN3-203ENST00000620514 CTTNBP2Q8WZ74 1663 aa29.03■■■□□ 2.24
HMGN3-203ENST00000620514 FAM69CQ0P6D2 419 aa29.02■■■□□ 2.24
HMGN3-203ENST00000620514 KIAA0556O60303 1618 aa29.01■■■□□ 2.23
HMGN3-203ENST00000620514 DIP2BQ9P265 1576 aa28.98■■■□□ 2.23
HMGN3-203ENST00000620514 UACAQ9BZF9 1416 aa28.97■■■□□ 2.23
HMGN3-203ENST00000620514 ABCC2Q92887 1545 aa28.97■■■□□ 2.23
HMGN3-203ENST00000620514 CSRNP3Q8WYN3 585 aa28.96■■■□□ 2.23
HMGN3-203ENST00000620514 UHRF1BP1LA0JNW5 1464 aa28.95■■■□□ 2.22
HMGN3-203ENST00000620514 GOLGA3Q08378 1498 aa28.87■■■□□ 2.21
HMGN3-203ENST00000620514 ASXL2Q76L83 1435 aa28.86■■■□□ 2.21
HMGN3-203ENST00000620514 EEA1Q15075 1411 aa28.85■■■□□ 2.21
HMGN3-203ENST00000620514 FAM9AQ8IZU1 332 aaPredicted RBP28.83■■■□□ 2.21
HMGN3-203ENST00000620514 KDM5BQ9UGL1 1544 aa28.83■■■□□ 2.21
HMGN3-203ENST00000620514 PLB1Q6P1J6 1458 aa28.8■■■□□ 2.2
HMGN3-203ENST00000620514 ZCCHC11Q5TAX3 1644 aaKnown RBP28.77■■■□□ 2.2
HMGN3-203ENST00000620514 TSPOAP1O95153 1857 aa28.77■■■□□ 2.2
HMGN3-203ENST00000620514 CHIC1Q5VXU3 224 aa28.75■■■□□ 2.19
HMGN3-203ENST00000620514 P3H3Q8IVL6 736 aa28.74■■■□□ 2.19
HMGN3-203ENST00000620514 ABCA8O94911 1581 aa28.73■■■□□ 2.19
HMGN3-203ENST00000620514 GLI2P10070 1586 aa28.71■■■□□ 2.19
HMGN3-203ENST00000620514 EPRSP07814 1512 aaKnown RBP28.68■■■□□ 2.18
HMGN3-203ENST00000620514 SAMD9Q5K651 1589 aa28.65■■■□□ 2.18
HMGN3-203ENST00000620514 KDM6BO15054 1643 aa28.64■■■□□ 2.18
HMGN3-203ENST00000620514 RANGAP1P46060 587 aaPredicted RBP28.63■■■□□ 2.17
HMGN3-203ENST00000620514 PPRC1Q5VV67 1664 aaKnown RBP28.63■■■□□ 2.17
HMGN3-203ENST00000620514 KIF21BO75037 1637 aa28.61■■■□□ 2.17
HMGN3-203ENST00000620514 WDR7Q9Y4E6 1490 aa28.61■■■□□ 2.17
HMGN3-203ENST00000620514 ARID3CA6NKF2 412 aa28.57■■■□□ 2.16
HMGN3-203ENST00000620514 MAP3K4Q9Y6R4 1608 aa28.57■■■□□ 2.16
HMGN3-203ENST00000620514 EHMT2Q96KQ7 1210 aa28.54■■■□□ 2.16
HMGN3-203ENST00000620514 KCNH8Q96L42 1107 aa28.52■■■□□ 2.16
HMGN3-203ENST00000620514 FHOD3Q2V2M9 1422 aa28.52■■■□□ 2.16
HMGN3-203ENST00000620514 AEBP2Q6ZN18 517 aaPredicted RBP28.51■■■□□ 2.15
HMGN3-203ENST00000620514 ATP10BO94823 1461 aa28.51■■■□□ 2.15
HMGN3-203ENST00000620514 RAPGEF6Q8TEU7 1601 aa28.47■■■□□ 2.15
HMGN3-203ENST00000620514 TEX14Q8IWB6 1497 aa28.45■■■□□ 2.14
HMGN3-203ENST00000620514 COL17A1Q9UMD9 1497 aaPredicted RBP28.44■■■□□ 2.14
HMGN3-203ENST00000620514 UBTFP17480 764 aaKnown RBP28.42■■■□□ 2.14
HMGN3-203ENST00000620514 EFCAB5A4FU69 1503 aa28.41■■■□□ 2.14
HMGN3-203ENST00000620514 CD109Q6YHK3 1445 aa28.41■■■□□ 2.14
HMGN3-203ENST00000620514 NUP153P49790 1475 aaKnown RBP28.4■■■□□ 2.14
HMGN3-203ENST00000620514 CFAP43Q8NDM7 1665 aa28.39■■■□□ 2.14
HMGN3-203ENST00000620514 MAGI3Q5TCQ9 1506 aa28.36■■■□□ 2.13
HMGN3-203ENST00000620514 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.35■■■□□ 2.13
HMGN3-203ENST00000620514 HNRNPUL2Q1KMD3 747 aaKnown RBP28.35■■■□□ 2.13
HMGN3-203ENST00000620514 ARHGAP35Q9NRY4 1499 aa28.26■■■□□ 2.11
HMGN3-203ENST00000620514 ABCA9Q8IUA7 1624 aa28.25■■■□□ 2.11
HMGN3-203ENST00000620514 KDM4FA0A1W2PPD8 638 aa28.25■■■□□ 2.11
HMGN3-203ENST00000620514 PLEKHD1A6NEE1 506 aa28.19■■■□□ 2.1
HMGN3-203ENST00000620514 CDK13Q14004 1512 aaKnown RBP28.17■■■□□ 2.1
HMGN3-203ENST00000620514 FMN1Q68DA7 1419 aa28.16■■■□□ 2.1
HMGN3-203ENST00000620514 ARAP3Q8WWN8 1544 aa28.13■■■□□ 2.09
HMGN3-203ENST00000620514 ATP1B4Q9UN42 357 aaPredicted RBP28.12■■■□□ 2.09
HMGN3-203ENST00000620514 ADGRL1O94910 1474 aa28.08■■■□□ 2.09
HMGN3-203ENST00000620514 HECW1Q76N89 1606 aa28.08■■■□□ 2.09
HMGN3-203ENST00000620514 PHLDB1Q86UU1 1377 aa28.07■■■□□ 2.08
HMGN3-203ENST00000620514 NEO1Q92859 1461 aa28.07■■■□□ 2.08
HMGN3-203ENST00000620514 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.07■■■□□ 2.08
HMGN3-203ENST00000620514 TTC37Q6PGP7 1564 aa28.03■■■□□ 2.08
HMGN3-203ENST00000620514 RAPGEF3O95398 923 aa28.03■■■□□ 2.08
HMGN3-203ENST00000620514 LRRIQ1Q96JM4 1722 aa27.96■■■□□ 2.07
HMGN3-203ENST00000620514 FRMPD1Q5SYB0 1578 aa27.96■■■□□ 2.07
HMGN3-203ENST00000620514 FANCAO15360 1455 aa27.95■■■□□ 2.06
HMGN3-203ENST00000620514 AKNAQ7Z591 1439 aa27.94■■■□□ 2.06
HMGN3-203ENST00000620514 CDK11AQ9UQ88 783 aaPredicted RBP27.93■■■□□ 2.06
HMGN3-203ENST00000620514 PCF11O94913 1555 aaKnown RBP27.93■■■□□ 2.06
HMGN3-203ENST00000620514 CLIP1P30622 1438 aa27.92■■■□□ 2.06
HMGN3-203ENST00000620514 CASKIN1Q8WXD9 1431 aa27.91■■■□□ 2.06
HMGN3-203ENST00000620514 CFAP74Q9C0B2 1584 aa27.9■■■□□ 2.06
HMGN3-203ENST00000620514 KIF14Q15058 1648 aa27.89■■■□□ 2.06
HMGN3-203ENST00000620514 TROQ12816 1431 aaPredicted RBP27.89■■■□□ 2.06
HMGN3-203ENST00000620514 DENND4BO75064 1496 aaPredicted RBP27.89■■■□□ 2.05
HMGN3-203ENST00000620514 PLCH2O75038 1416 aa27.88■■■□□ 2.05
HMGN3-203ENST00000620514 RICTORQ6R327 1708 aa27.85■■■□□ 2.05
HMGN3-203ENST00000620514 CCDC18Q5T9S5 1454 aa27.82■■■□□ 2.04
HMGN3-203ENST00000620514 MYO5CQ9NQX4 1742 aa27.81■■■□□ 2.04
HMGN3-203ENST00000620514 FYCO1Q9BQS8 1478 aa27.8■■■□□ 2.04
HMGN3-203ENST00000620514 SCAPERQ9BY12 1400 aa27.78■■■□□ 2.04
HMGN3-203ENST00000620514 EFCAB2Q5VUJ9 269 aa27.77■■■□□ 2.04
HMGN3-203ENST00000620514 ARHGEF40Q8TER5 1519 aa27.77■■■□□ 2.04
HMGN3-203ENST00000620514 ZMYM4Q5VZL5 1548 aa27.74■■■□□ 2.03
HMGN3-203ENST00000620514 POGZQ7Z3K3 1410 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms